RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
SHMT2-204ENST00000553324 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
SHMT2-204ENST00000553324 SYCNQ0VAF6 134 aa9.8□□□□□ -0.84
SHMT2-204ENST00000553324 KIAA1644Q3SXP7 199 aa9.8□□□□□ -0.84
SHMT2-204ENST00000553324 PAPPA-AS1Q5QFB9 102 aa9.8□□□□□ -0.84
SHMT2-204ENST00000553324 TEX43Q6ZNM6 134 aa9.8□□□□□ -0.84
SHMT2-204ENST00000553324 CARD19Q96LW7 228 aa9.8□□□□□ -0.84
SHMT2-204ENST00000553324 C2orf88Q9BSF0 95 aa9.8□□□□□ -0.84
SHMT2-204ENST00000553324 IGLV4-3A0A075B6K6 122 aa9.79□□□□□ -0.84
SHMT2-204ENST00000553324 IGHV3OR16-9A0A0B4J2B5 98 aa9.79□□□□□ -0.84
SHMT2-204ENST00000553324 SVBPQ8N300 66 aa9.79□□□□□ -0.84
SHMT2-204ENST00000553324 PRSS3P2Q8NHM4 247 aa9.79□□□□□ -0.84
SHMT2-204ENST00000553324 SPACA4Q8TDM5 124 aa9.79□□□□□ -0.84
SHMT2-204ENST00000553324 C2orf48Q96LS8 159 aa9.79□□□□□ -0.84
SHMT2-204ENST00000553324 VCX2Q9H322 139 aa9.79□□□□□ -0.84
SHMT2-204ENST00000553324 IGLV4-69A0A075B6H9 119 aa9.78□□□□□ -0.84
SHMT2-204ENST00000553324 TGIF2-C20orf24A0A0A6YYL0 155 aa9.78□□□□□ -0.84
SHMT2-204ENST00000553324 LINC01549A6NIU2 74 aa9.78□□□□□ -0.84
SHMT2-204ENST00000553324 F8WDY8 70 aa9.78□□□□□ -0.84
SHMT2-204ENST00000553324 PANO1I0J062 215 aa9.78□□□□□ -0.84
SHMT2-204ENST00000553324 SNAPINO95295 136 aa9.78□□□□□ -0.84
SHMT2-204ENST00000553324 APOC3P02656 99 aa9.78□□□□□ -0.84
SHMT2-204ENST00000553324 OR10D4PQ8NGN7 298 aa9.78□□□□□ -0.84
SHMT2-204ENST00000553324 LINC00526Q96FQ7 95 aa9.78□□□□□ -0.84
SHMT2-204ENST00000553324 A0A087WYN8 130 aa9.77□□□□□ -0.85
SHMT2-204ENST00000553324 FABP9Q0Z7S8 132 aa9.77□□□□□ -0.85
SHMT2-204ENST00000553324 CAMK2N2Q96S95 79 aa9.77□□□□□ -0.85
SHMT2-204ENST00000553324 ALKBH7Q9BT30 221 aaPredicted RBP9.77□□□□□ -0.85
SHMT2-204ENST00000553324 IGIPA6NJ69 53 aa9.76□□□□□ -0.85
SHMT2-204ENST00000553324 CHTF8P0CG12 524 aa9.76□□□□□ -0.85
SHMT2-204ENST00000553324 MRPL18Q9H0U6 180 aaKnown RBP9.76□□□□□ -0.85
SHMT2-204ENST00000553324 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
SHMT2-204ENST00000553324 SPAG11BQ08648 103 aa9.75□□□□□ -0.85
SHMT2-204ENST00000553324 MAJINQ3KP22 176 aa9.75□□□□□ -0.85
SHMT2-204ENST00000553324 LINC00242Q5T6M2 205 aa9.75□□□□□ -0.85
SHMT2-204ENST00000553324 TOMM6Q96B49 74 aa9.75□□□□□ -0.85
SHMT2-204ENST00000553324 AMELXQ99217 191 aa9.75□□□□□ -0.85
SHMT2-204ENST00000553324 TIMM17AQ99595 171 aa9.75□□□□□ -0.85
SHMT2-204ENST00000553324 A0A087WZ39 114 aa9.74□□□□□ -0.85
SHMT2-204ENST00000553324 IGKV2-24A0A0C4DH68 120 aa9.74□□□□□ -0.85
SHMT2-204ENST00000553324 UBE2D1P51668 147 aa9.74□□□□□ -0.85
SHMT2-204ENST00000553324 RPL37AP61513 92 aaKnown RBP9.74□□□□□ -0.85
SHMT2-204ENST00000553324 SEC11AP67812 179 aa9.74□□□□□ -0.85
SHMT2-204ENST00000553324 RNF151Q2KHN1 245 aa9.74□□□□□ -0.85
SHMT2-204ENST00000553324 LINC01561Q8N1V8 128 aa9.74□□□□□ -0.85
SHMT2-204ENST00000553324 ORAOV1Q8WV07 137 aa9.74□□□□□ -0.85
SHMT2-204ENST00000553324 LOC107984640A0A0U1RRK4 108 aa9.73□□□□□ -0.85
SHMT2-204ENST00000553324 LINC01546A6NGU7 62 aa9.73□□□□□ -0.85
SHMT2-204ENST00000553324 Q6ZRU5 148 aa9.73□□□□□ -0.85
SHMT2-204ENST00000553324 ERASQ7Z444 233 aa9.73□□□□□ -0.85
SHMT2-204ENST00000553324 STPG4Q8N801 248 aa9.73□□□□□ -0.85
SHMT2-204ENST00000553324 TRAPPC1Q9Y5R8 145 aa9.73□□□□□ -0.85
SHMT2-204ENST00000553324 A0A096LNI7 61 aa9.72□□□□□ -0.85
SHMT2-204ENST00000553324 FA2HQ7L5A8 372 aa9.72□□□□□ -0.85
SHMT2-204ENST00000553324 C7orf33Q8WU49 177 aa9.72□□□□□ -0.85
SHMT2-204ENST00000553324 SCGB3A1Q96QR1 104 aa9.72□□□□□ -0.85
SHMT2-204ENST00000553324 SMCO4Q9NRQ5 59 aa9.72□□□□□ -0.85
SHMT2-204ENST00000553324 MRPL35Q9NZE8 188 aaKnown RBP9.72□□□□□ -0.85
SHMT2-204ENST00000553324 NDUFA1O15239 70 aa9.71□□□□□ -0.86
SHMT2-204ENST00000553324 KRTAP10-4P60372 401 aaPredicted RBP9.71□□□□□ -0.86
SHMT2-204ENST00000553324 FAM19A3Q7Z5A8 133 aa9.71□□□□□ -0.86
SHMT2-204ENST00000553324 MYCBP2O75592 4640 aa9.7□□□□□ -0.86
SHMT2-204ENST00000553324 PTTG1IPP53801 180 aa9.7□□□□□ -0.86
SHMT2-204ENST00000553324 HERVK_113P63121 156 aa9.7□□□□□ -0.86
SHMT2-204ENST00000553324 LINC00173Q6ZV60 143 aa9.7□□□□□ -0.86
SHMT2-204ENST00000553324 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
SHMT2-204ENST00000553324 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
SHMT2-204ENST00000553324 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
SHMT2-204ENST00000553324 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-204ENST00000553324 LINC00614P0C842 121 aa9.67□□□□□ -0.86
SHMT2-204ENST00000553324 RAB5BP61020 215 aa9.67□□□□□ -0.86
SHMT2-204ENST00000553324 PRSS2P07478 247 aa9.66□□□□□ -0.86
SHMT2-204ENST00000553324 KIAA0087Q14695 138 aa9.66□□□□□ -0.86
SHMT2-204ENST00000553324 PACRGQ96M98 296 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-204ENST00000553324 FLG2Q5D862 2391 aaPredicted RBP9.66□□□□□ -0.86
SHMT2-204ENST00000553324 KRTAP29-1A8MX34 341 aaPredicted RBP9.65□□□□□ -0.86
SHMT2-204ENST00000553324 J3QL48 77 aa9.65□□□□□ -0.86
SHMT2-204ENST00000553324 TLX1NBP0CAT3 122 aa9.65□□□□□ -0.86
SHMT2-204ENST00000553324 RPL18AQ02543 176 aaKnown RBP9.65□□□□□ -0.86
SHMT2-204ENST00000553324 UNQ6190/PRO20217Q6UXQ8 127 aa9.65□□□□□ -0.86
SHMT2-204ENST00000553324 TRBV30A0A0K0K1B3 111 aa9.64□□□□□ -0.87
SHMT2-204ENST00000553324 PMVKQ15126 192 aa9.64□□□□□ -0.87
SHMT2-204ENST00000553324 C6orf226Q5I0X4 101 aa9.64□□□□□ -0.87
SHMT2-204ENST00000553324 C18orf32Q8TCD1 76 aa9.64□□□□□ -0.87
SHMT2-204ENST00000553324 CST9LQ9H4G1 147 aa9.64□□□□□ -0.87
SHMT2-204ENST00000553324 A0A0J9YXV3 536 aa9.63□□□□□ -0.87
SHMT2-204ENST00000553324 TINCRA0A1B0GVN0 87 aa9.63□□□□□ -0.87
SHMT2-204ENST00000553324 OXTP01178 125 aa9.63□□□□□ -0.87
SHMT2-204ENST00000553324 CKS1BP61024 79 aa9.63□□□□□ -0.87
SHMT2-204ENST00000553324 Q8IZM0 81 aa9.63□□□□□ -0.87
SHMT2-204ENST00000553324 CDKN2A-AS1Q9UH64 79 aa9.63□□□□□ -0.87
SHMT2-204ENST00000553324 C10orf25Q5T742 122 aa9.62□□□□□ -0.87
SHMT2-204ENST00000553324 YPEL4Q96NS1 127 aa9.62□□□□□ -0.87
SHMT2-204ENST00000553324 C6orf48Q9UBA6 75 aa9.62□□□□□ -0.87
SHMT2-204ENST00000553324 HBDP02042 147 aa9.61□□□□□ -0.87
SHMT2-204ENST00000553324 C9orf116Q5BN46 136 aaPredicted RBP9.61□□□□□ -0.87
SHMT2-204ENST00000553324 LINC00469Q8N7U9 141 aa9.61□□□□□ -0.87
SHMT2-204ENST00000553324 TOMM7Q9P0U1 55 aa9.61□□□□□ -0.87
SHMT2-204ENST00000553324 A0A1W2PNN7 141 aa9.6□□□□□ -0.87
SHMT2-204ENST00000553324 Q6ZRP5 223 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms