RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 H3BRM9 83 aa6.71□□□□□ -1.34
TRAFD1-208ENST00000552890 HSBP1O75506 76 aa6.71□□□□□ -1.34
TRAFD1-208ENST00000552890 UBE2D1P51668 147 aa6.71□□□□□ -1.34
TRAFD1-208ENST00000552890 PACRGQ96M98 296 aaPredicted RBP6.71□□□□□ -1.34
TRAFD1-208ENST00000552890 IGLV4-69A0A075B6H9 119 aa6.7□□□□□ -1.34
TRAFD1-208ENST00000552890 TINCRA0A1B0GVN0 87 aa6.7□□□□□ -1.34
TRAFD1-208ENST00000552890 COLCA2A8K830 154 aa6.7□□□□□ -1.34
TRAFD1-208ENST00000552890 TRGC2P03986 189 aa6.7□□□□□ -1.34
TRAFD1-208ENST00000552890 PRSS2P07478 247 aa6.7□□□□□ -1.34
TRAFD1-208ENST00000552890 RNF151Q2KHN1 245 aa6.7□□□□□ -1.34
TRAFD1-208ENST00000552890 RNASE13Q5GAN3 156 aaKnown RBP6.7□□□□□ -1.34
TRAFD1-208ENST00000552890 SYCNQ0VAF6 134 aa6.69□□□□□ -1.34
TRAFD1-208ENST00000552890 WFDC2Q14508 124 aa6.69□□□□□ -1.34
TRAFD1-208ENST00000552890 LINC00242Q5T6M2 205 aa6.69□□□□□ -1.34
TRAFD1-208ENST00000552890 SFTA2Q6UW10 78 aa6.69□□□□□ -1.34
TRAFD1-208ENST00000552890 C5orf38Q86SI9 138 aa6.69□□□□□ -1.34
TRAFD1-208ENST00000552890 C15orf56Q8N910 161 aa6.69□□□□□ -1.34
TRAFD1-208ENST00000552890 CARD19Q96LW7 228 aa6.69□□□□□ -1.34
TRAFD1-208ENST00000552890 HSPB8Q9UJY1 196 aa6.69□□□□□ -1.34
TRAFD1-208ENST00000552890 FAT2Q9NYQ8 4349 aa6.69□□□□□ -1.34
TRAFD1-208ENST00000552890 NDUFA1O15239 70 aa6.68□□□□□ -1.34
TRAFD1-208ENST00000552890 CXCL5P42830 114 aa6.68□□□□□ -1.34
TRAFD1-208ENST00000552890 SPAG11BQ08648 103 aa6.68□□□□□ -1.34
TRAFD1-208ENST00000552890 ORAOV1Q8WV07 137 aa6.68□□□□□ -1.34
TRAFD1-208ENST00000552890 DPH3Q96FX2 82 aa6.68□□□□□ -1.34
TRAFD1-208ENST00000552890 CAMK2N2Q96S95 79 aa6.68□□□□□ -1.34
TRAFD1-208ENST00000552890 OPRPNQ99935 248 aaPredicted RBP6.68□□□□□ -1.34
TRAFD1-208ENST00000552890 CST9LQ9H4G1 147 aa6.68□□□□□ -1.34
TRAFD1-208ENST00000552890 FAM229AH3BQW9 127 aa6.67□□□□□ -1.34
TRAFD1-208ENST00000552890 KRTAP10-1P60331 282 aa6.67□□□□□ -1.34
TRAFD1-208ENST00000552890 CKS1BP61024 79 aa6.67□□□□□ -1.34
TRAFD1-208ENST00000552890 HIGD2BQ4VC39 106 aa6.67□□□□□ -1.34
TRAFD1-208ENST00000552890 Q6ZSA8 131 aa6.67□□□□□ -1.34
TRAFD1-208ENST00000552890 CHAC1Q9BUX1 264 aa6.67□□□□□ -1.34
TRAFD1-208ENST00000552890 PKD1P98161 4303 aa6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 TRAV12-1A0A0B4J245 112 aa6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 TRBV30A0A0K0K1B3 111 aa6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 NDUFA6P56556 154 aa6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 PDZD11Q5EBL8 140 aa6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 C6orf226Q5I0X4 101 aa6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 Q8IZM0 81 aa6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 LINC00469Q8N7U9 141 aa6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 FAM104AQ969W3 186 aa6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 MRPL35Q9NZE8 188 aaKnown RBP6.66□□□□□ -1.34
TRAFD1-208ENST00000552890 LOC107984640A0A0U1RRK4 108 aa6.65□□□□□ -1.34
TRAFD1-208ENST00000552890 LEPROTL1O95214 131 aa6.65□□□□□ -1.34
TRAFD1-208ENST00000552890 AKR1D1P51857 326 aa6.65□□□□□ -1.34
TRAFD1-208ENST00000552890 SDIM1Q6ZPB5 146 aa6.65□□□□□ -1.34
TRAFD1-208ENST00000552890 LINC00173Q6ZV60 143 aa6.65□□□□□ -1.34
TRAFD1-208ENST00000552890 IFI27L1Q96BM0 104 aa6.65□□□□□ -1.34
TRAFD1-208ENST00000552890 IGLV5-45A0A087WSX0 123 aa6.64□□□□□ -1.35
TRAFD1-208ENST00000552890 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
TRAFD1-208ENST00000552890 PKHD1P08F94 4074 aa6.63□□□□□ -1.35
TRAFD1-208ENST00000552890 IGLC3P0DOY3 106 aa6.63□□□□□ -1.35
TRAFD1-208ENST00000552890 CIRBPQ14011 172 aaKnown RBP6.63□□□□□ -1.35
TRAFD1-208ENST00000552890 Q8N1X5 172 aa6.63□□□□□ -1.35
TRAFD1-208ENST00000552890 CDKN2A-AS1Q9UH64 79 aa6.63□□□□□ -1.35
TRAFD1-208ENST00000552890 A0A096LNJ9 63 aa6.62□□□□□ -1.35
TRAFD1-208ENST00000552890 A0A0J9YXV3 536 aa6.62□□□□□ -1.35
TRAFD1-208ENST00000552890 SERF1AO75920 110 aa6.62□□□□□ -1.35
TRAFD1-208ENST00000552890 PLNP26678 52 aa6.62□□□□□ -1.35
TRAFD1-208ENST00000552890 URB1-AS1Q96HZ7 61 aa6.62□□□□□ -1.35
TRAFD1-208ENST00000552890 MAP1LC3CQ9BXW4 147 aa6.62□□□□□ -1.35
TRAFD1-208ENST00000552890 CHTOPQ9Y3Y2 248 aaKnown RBP6.62□□□□□ -1.35
TRAFD1-208ENST00000552890 LINC00587B1AMM8 73 aa6.61□□□□□ -1.35
TRAFD1-208ENST00000552890 EPM2AB3EWF7 344 aa6.61□□□□□ -1.35
TRAFD1-208ENST00000552890 F8VRH5 84 aa6.61□□□□□ -1.35
TRAFD1-208ENST00000552890 TLX1NBP0CAT3 122 aa6.61□□□□□ -1.35
TRAFD1-208ENST00000552890 XGP55808 180 aa6.61□□□□□ -1.35
TRAFD1-208ENST00000552890 COX6A2Q02221 97 aa6.61□□□□□ -1.35
TRAFD1-208ENST00000552890 C7orf33Q8WU49 177 aa6.61□□□□□ -1.35
TRAFD1-208ENST00000552890 TOMM7Q9P0U1 55 aa6.61□□□□□ -1.35
TRAFD1-208ENST00000552890 ATP6V1G1O75348 118 aa6.6□□□□□ -1.35
TRAFD1-208ENST00000552890 SLPIP03973 132 aa6.6□□□□□ -1.35
TRAFD1-208ENST00000552890 ODF1Q14990 250 aa6.6□□□□□ -1.35
TRAFD1-208ENST00000552890 PMCHL1Q16048 86 aa6.6□□□□□ -1.35
TRAFD1-208ENST00000552890 COX7B2Q8TF08 81 aa6.6□□□□□ -1.35
TRAFD1-208ENST00000552890 DNAH11Q96DT5 4516 aa6.6□□□□□ -1.35
TRAFD1-208ENST00000552890 NDUFC2-KCTD14E9PQ53 114 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST1H2BKO60814 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST1H2BJP06899 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST1H2BOP23527 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST1H2BBP33778 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 FUSP35637 526 aaKnown RBP eCLIP6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST1H2BDP58876 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HERVK_113P61574 105 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST1H2BCP62807 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST2H2BEQ16778 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 TMEM170BQ5T4T1 132 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 Q6ZRU5 148 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 SPACA4Q8TDM5 124 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST1H2BHQ93079 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST1H2BNQ99877 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 HIST1H2BMQ99879 126 aa6.59□□□□□ -1.35
TRAFD1-208ENST00000552890 EPPK1P58107 5090 aaKnown RBP6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 SMIM1B2RUZ4 78 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 SCO1O75880 301 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 PTTG1IPP53801 180 aa6.58□□□□□ -1.36
TRAFD1-208ENST00000552890 RPL18AQ02543 176 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms