RNA–Protein interactions for RNA: ENST00000552874.1

NPAS3-213, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 5

Gene NPAS3, Length 634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-213ENST00000552874 ZNF664Q8N3J9 261 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 C15orf56Q8N910 161 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 NTN5Q8WTR8 489 aaPredicted RBP5.04□□□□□ -1.6
NPAS3-213ENST00000552874 AMELXQ99217 191 aa5.04□□□□□ -1.6
NPAS3-213ENST00000552874 CHTOPQ9Y3Y2 248 aaKnown RBP5.04□□□□□ -1.6
NPAS3-213ENST00000552874 IGLV10-54A0A075B6I4 117 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 TRAV8-4A0A0B4J246 113 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 LINC00614P0C842 121 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 PDZD11Q5EBL8 140 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 FAM19A3Q7Z5A8 133 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 Q8N814 137 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 CHCHD10Q8WYQ3 142 aaPredicted RBP5.03□□□□□ -1.6
NPAS3-213ENST00000552874 TIMM17AQ99595 171 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 C1orf43Q9BWL3 253 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 TM2D2Q9BX73 214 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 CYSLTR1Q9Y271 337 aa5.03□□□□□ -1.6
NPAS3-213ENST00000552874 LECT2O14960 151 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 DDTP30046 118 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 FUSP35637 526 aaKnown RBP eCLIP5.02□□□□□ -1.61
NPAS3-213ENST00000552874 ZC2HC1BQ5TFG8 222 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 BAALCQ8WXS3 180 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 TMEM18Q96B42 140 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 RMI2Q96E14 147 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 TMEM101Q96IK0 257 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 AP5S1Q9NUS5 200 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 COX11Q9Y6N1 276 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
NPAS3-213ENST00000552874 USP17L23D6RBM5 183 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 CCL25O15444 150 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST1H2BKO60814 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST1H2BJP06899 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST1H2BOP23527 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST1H2BBP33778 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 UBE2D1P51668 147 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST1H2BDP58876 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST1H2BCP62807 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST2H2BEQ16778 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 PYY3Q5JQD4 70 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.01□□□□□ -1.61
NPAS3-213ENST00000552874 FA2HQ7L5A8 372 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 ERASQ7Z444 233 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 SPATA12Q7Z6I5 190 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 PRSS3P2Q8NHM4 247 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST1H2BHQ93079 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 TMEM141Q96I45 108 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST1H2BNQ99877 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 HIST1H2BMQ99879 126 aa5.01□□□□□ -1.61
NPAS3-213ENST00000552874 IGHV3OR16-9A0A0B4J2B5 98 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 IGKV3OR2-268A0A0C4DH90 116 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 GAGE12HA6NDE8 117 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 TSTD3H0UI37 97 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 PSCAO43653 123 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 NUPR1O60356 82 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 SERF1AO75920 110 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 HBDP02042 147 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 SLPIP03973 132 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 SMAGPQ0VAQ4 97 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 PMCHL1Q16048 86 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 LINC00242Q5T6M2 205 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 CD164L2Q6UWJ8 174 aa5□□□□□ -1.61
NPAS3-213ENST00000552874 CHCHD1Q96BP2 118 aaKnown RBP5□□□□□ -1.61
NPAS3-213ENST00000552874 GVQW2A0A096LPI5 108 aaPredicted RBP4.99□□□□□ -1.61
NPAS3-213ENST00000552874 IFITM10A6NMD0 228 aa4.99□□□□□ -1.61
NPAS3-213ENST00000552874 PRSS1P07477 247 aa4.99□□□□□ -1.61
NPAS3-213ENST00000552874 XCL1P47992 114 aa4.99□□□□□ -1.61
NPAS3-213ENST00000552874 COX6A2Q02221 97 aa4.99□□□□□ -1.61
NPAS3-213ENST00000552874 MYCBP2O75592 4640 aa4.99□□□□□ -1.61
NPAS3-213ENST00000552874 FAT3Q8TDW7 4589 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 IGLV4-69A0A075B6H9 119 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 IGLV5-45A0A087WSX0 123 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 TRAV13-1A0A0B4J241 112 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 LINC01549A6NIU2 74 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 KRTAP10-1P60331 282 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 CNBPP62633 177 aaKnown RBP4.98□□□□□ -1.61
NPAS3-213ENST00000552874 COA6Q5JTJ3 125 aaKnown RBP4.98□□□□□ -1.61
NPAS3-213ENST00000552874 LCE1DQ5T752 114 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 DGAT2L7PQ6IED9 249 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 Q6ZSA8 131 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
NPAS3-213ENST00000552874 DLEU1O43261 78 aa4.97□□□□□ -1.61
NPAS3-213ENST00000552874 S100A2P29034 98 aa4.97□□□□□ -1.61
NPAS3-213ENST00000552874 SS18Q15532 418 aa4.97□□□□□ -1.61
NPAS3-213ENST00000552874 TEX43Q6ZNM6 134 aa4.97□□□□□ -1.61
NPAS3-213ENST00000552874 SCGB3A1Q96QR1 104 aa4.97□□□□□ -1.61
NPAS3-213ENST00000552874 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.96□□□□□ -1.62
NPAS3-213ENST00000552874 A0A087WZ39 114 aa4.96□□□□□ -1.62
NPAS3-213ENST00000552874 IGLC3P0DOY3 106 aa4.96□□□□□ -1.62
NPAS3-213ENST00000552874 G0S2P27469 103 aa4.96□□□□□ -1.62
NPAS3-213ENST00000552874 KIAA0087Q14695 138 aa4.96□□□□□ -1.62
NPAS3-213ENST00000552874 CFAP161Q6P656 301 aa4.96□□□□□ -1.62
NPAS3-213ENST00000552874 FAM19A2Q8N3H0 131 aa4.96□□□□□ -1.62
NPAS3-213ENST00000552874 CST9LQ9H4G1 147 aa4.96□□□□□ -1.62
NPAS3-213ENST00000552874 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.96□□□□□ -1.62
NPAS3-213ENST00000552874 IGHV3-64A0A075B6Q5 118 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 IGHV1-58A0A0C4DH39 117 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 A0A0J9YXV3 536 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 C16orf90A8MZG2 172 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 HSBP1L1C9JCN9 74 aa4.95□□□□□ -1.62
NPAS3-213ENST00000552874 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.95□□□□□ -1.62
NPAS3-213ENST00000552874 COX7A2LO14548 114 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms