RNA–Protein interactions for RNA: ENST00000552343.1

HCFC2-206, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 992 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-206ENST00000552343 TMEM242Q9NWH2 141 aa2.36□□□□□ -2.03
HCFC2-206ENST00000552343 NHP2Q9NX24 153 aaKnown RBP2.36□□□□□ -2.03
HCFC2-206ENST00000552343 LY96Q9Y6Y9 160 aa2.36□□□□□ -2.03
HCFC2-206ENST00000552343 ARHGAP32A7KAX9 2087 aa2.36□□□□□ -2.03
HCFC2-206ENST00000552343 VWFP04275 2813 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 IGKV1D-17A0A075B6S4 117 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 TRAV17A0A0B4J275 112 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 FAM24AA6NFZ4 105 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 ZNF705FA8MVS1 300 aaPredicted RBP2.35□□□□□ -2.03
HCFC2-206ENST00000552343 E7EQL1 145 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 J3QLW9 94 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 IGKV1-17P01599 117 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 CRPP02741 224 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 IL5P05113 134 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 SNCAP37840 140 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 INSL4Q14641 139 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 ASB16-AS1Q495Z4 193 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 ATP6V0E2Q8NHE4 81 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 SPTSSAQ969W0 71 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 C20orf166-AS1Q96NR2 134 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 AP4S1Q9Y587 144 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 CR1P17927 2039 aa2.35□□□□□ -2.03
HCFC2-206ENST00000552343 IGHV3OR16-8A0A075B7F1 116 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 C17orf112F2Z3M2 114 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 SNRNP200O75643 2136 aaKnown RBP2.34□□□□□ -2.03
HCFC2-206ENST00000552343 SNCGO76070 127 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 NDUFB6O95139 128 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 LINC00032P0C843 101 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 SPRNQ5BIV9 151 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 Q8N8P6 123 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 LINC00301Q8NCQ3 95 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 TSKUQ8WUA8 353 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 DPH3P1Q9H4G8 78 aa2.34□□□□□ -2.03
HCFC2-206ENST00000552343 MED12Q93074 2177 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 H3BQ15 152 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 PIRTP0C851 137 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 COX7CP15954 63 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 DCDP81605 110 aaKnown RBP2.33□□□□□ -2.04
HCFC2-206ENST00000552343 Q0VG73 95 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 S100A7L2Q5SY68 101 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 KRTAP5-7Q6L8G8 165 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 UNQ5815/PRO19632Q6UWF5 114 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 SBSPONQ8IVN8 264 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 LINC00269Q8N2A0 174 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 Q96M85 177 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 BET1LQ9NYM9 111 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 MUC4Q99102 2169 aa2.33□□□□□ -2.04
HCFC2-206ENST00000552343 EPPK1P58107 5090 aaKnown RBP2.33□□□□□ -2.04
HCFC2-206ENST00000552343 PRR14LQ5THK1 2151 aa2.32□□□□□ -2.04
HCFC2-206ENST00000552343 A0A0J9YX75 114 aa2.32□□□□□ -2.04
HCFC2-206ENST00000552343 ZNF345Q14585 488 aa2.32□□□□□ -2.04
HCFC2-206ENST00000552343 TMEM136Q6ZRR5 245 aa2.32□□□□□ -2.04
HCFC2-206ENST00000552343 WNK1Q9H4A3 2382 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 TRAV14DV4A0A0A6YYC5 116 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 GNGT2O14610 69 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 PROSCO94903 275 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 NMBP08949 121 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 P0C880 135 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 PRB4P10163 310 aaPredicted RBP2.31□□□□□ -2.04
HCFC2-206ENST00000552343 SPINT3P49223 89 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 RBM3P98179 157 aaKnown RBP2.31□□□□□ -2.04
HCFC2-206ENST00000552343 ZNF826PQ6ZT77 177 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 SLC25A26Q70HW3 274 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 LINC00052Q96N35 136 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 SMIM7Q9BQ49 75 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 C14orf132Q9NPU4 83 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 FREM1Q5H8C1 2179 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 ROS1P08922 2347 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 BIRC6Q9NR09 4857 aa2.31□□□□□ -2.04
HCFC2-206ENST00000552343 IGHV3-64A0A075B6Q5 118 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 IGKV3D-11A0A0A0MRZ8 115 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 SPRR5A0A1B0GTR4 108 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 SSR2P43308 183 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 RPL26P61254 145 aaKnown RBP2.3□□□□□ -2.04
HCFC2-206ENST00000552343 PEA15Q15121 130 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 ZNF791Q3KP31 576 aaPredicted RBP2.3□□□□□ -2.04
HCFC2-206ENST00000552343 TDRG1Q3Y452 100 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 KRTAP13-2Q52LG2 175 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 ZCCHC23Q6ZST2 131 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 ARPINQ7Z6K5 226 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 C5orf38Q86SI9 138 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 MUCL1Q96DR8 90 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 MED9Q9NWA0 146 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 R4GN34 69 aa2.3□□□□□ -2.04
HCFC2-206ENST00000552343 A0A096LNT2 108 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 UBE2L5PA0A1B0GUS4 154 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 SMIM31A0A1B0GVY4 71 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 HMSDA8MTL9 139 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 K7EP34 96 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 SSSCA1O60232 199 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 ASAH2BP0C7U1 165 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 PIPP12273 146 aaPredicted RBP2.29□□□□□ -2.04
HCFC2-206ENST00000552343 ADCYAP1P18509 176 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 DSCR4P56555 118 aaPredicted RBP2.29□□□□□ -2.04
HCFC2-206ENST00000552343 UBE2L3P68036 154 aaKnown RBP2.29□□□□□ -2.04
HCFC2-206ENST00000552343 C6orf52Q5T4I8 152 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 C12orf73Q69YU5 71 aa2.29□□□□□ -2.04
HCFC2-206ENST00000552343 ALKAL2Q6UX46 152 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms