RNA–Protein interactions for RNA: ENST00000551594.1

CTDSP2-207, Transcript of CTD small phosphatase 2, humanhuman

TSL 3

Gene CTDSP2, Length 900 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-207ENST00000551594 LINC00242Q5T6M2 205 aa12.28□□□□□ -0.44
CTDSP2-207ENST00000551594 C5orf38Q86SI9 138 aa12.28□□□□□ -0.44
CTDSP2-207ENST00000551594 FAM19A2Q8N3H0 131 aa12.28□□□□□ -0.44
CTDSP2-207ENST00000551594 HIST1H2BHQ93079 126 aa12.28□□□□□ -0.44
CTDSP2-207ENST00000551594 HIST1H2BNQ99877 126 aa12.28□□□□□ -0.44
CTDSP2-207ENST00000551594 HIST1H2BMQ99879 126 aa12.28□□□□□ -0.44
CTDSP2-207ENST00000551594 NUPR1O60356 82 aa12.27□□□□□ -0.45
CTDSP2-207ENST00000551594 COX6A2Q02221 97 aa12.27□□□□□ -0.45
CTDSP2-207ENST00000551594 PAPPA-AS1Q5QFB9 102 aa12.27□□□□□ -0.45
CTDSP2-207ENST00000551594 NTN5Q8WTR8 489 aaPredicted RBP12.27□□□□□ -0.45
CTDSP2-207ENST00000551594 BIRC6Q9NR09 4857 aa12.26□□□□□ -0.45
CTDSP2-207ENST00000551594 hDV102S1A0JD36 115 aa12.26□□□□□ -0.45
CTDSP2-207ENST00000551594 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.26□□□□□ -0.45
CTDSP2-207ENST00000551594 COX7A2LO14548 114 aa12.26□□□□□ -0.45
CTDSP2-207ENST00000551594 HSBP1O75506 76 aa12.26□□□□□ -0.45
CTDSP2-207ENST00000551594 HIGD2BQ4VC39 106 aa12.26□□□□□ -0.45
CTDSP2-207ENST00000551594 CDPF1Q6NVV7 123 aa12.25□□□□□ -0.45
CTDSP2-207ENST00000551594 CFAP161Q6P656 301 aa12.25□□□□□ -0.45
CTDSP2-207ENST00000551594 CST9LQ9H4G1 147 aa12.25□□□□□ -0.45
CTDSP2-207ENST00000551594 IGHV3OR16-9A0A0B4J2B5 98 aa12.24□□□□□ -0.45
CTDSP2-207ENST00000551594 MALP21145 153 aa12.24□□□□□ -0.45
CTDSP2-207ENST00000551594 IGHV1-58A0A0C4DH39 117 aa12.23□□□□□ -0.45
CTDSP2-207ENST00000551594 A0A0J9YXV3 536 aa12.23□□□□□ -0.45
CTDSP2-207ENST00000551594 NDUFA6P56556 154 aa12.23□□□□□ -0.45
CTDSP2-207ENST00000551594 PMVKQ15126 192 aa12.23□□□□□ -0.45
CTDSP2-207ENST00000551594 LINC01620Q4KN68 170 aa12.23□□□□□ -0.45
CTDSP2-207ENST00000551594 LINC00526Q96FQ7 95 aa12.23□□□□□ -0.45
CTDSP2-207ENST00000551594 SLPIP03973 132 aa12.22□□□□□ -0.45
CTDSP2-207ENST00000551594 GCSHP23434 173 aa12.22□□□□□ -0.45
CTDSP2-207ENST00000551594 KRTAP10-1P60331 282 aa12.22□□□□□ -0.45
CTDSP2-207ENST00000551594 FAM19A3Q7Z5A8 133 aa12.22□□□□□ -0.45
CTDSP2-207ENST00000551594 GVQW2A0A096LPI5 108 aaPredicted RBP12.21□□□□□ -0.45
CTDSP2-207ENST00000551594 ATP5LO75964 103 aa12.21□□□□□ -0.45
CTDSP2-207ENST00000551594 DNAH8Q96JB1 4490 aa12.19□□□□□ -0.46
CTDSP2-207ENST00000551594 A0A087WZ39 114 aa12.18□□□□□ -0.46
CTDSP2-207ENST00000551594 IFI27L1Q96BM0 104 aa12.18□□□□□ -0.46
CTDSP2-207ENST00000551594 GEMIN7Q9H840 131 aaKnown RBP12.18□□□□□ -0.46
CTDSP2-207ENST00000551594 IGHV3-64A0A075B6Q5 118 aa12.17□□□□□ -0.46
CTDSP2-207ENST00000551594 TINCRA0A1B0GVN0 87 aa12.17□□□□□ -0.46
CTDSP2-207ENST00000551594 APOMO95445 188 aa12.17□□□□□ -0.46
CTDSP2-207ENST00000551594 CNBPP62633 177 aaKnown RBP12.17□□□□□ -0.46
CTDSP2-207ENST00000551594 HERVK_113P63121 156 aa12.17□□□□□ -0.46
CTDSP2-207ENST00000551594 ORAOV1Q8WV07 137 aa12.17□□□□□ -0.46
CTDSP2-207ENST00000551594 CDKN2A-AS1Q9UH64 79 aa12.17□□□□□ -0.46
CTDSP2-207ENST00000551594 IGLV4-69A0A075B6H9 119 aa12.16□□□□□ -0.46
CTDSP2-207ENST00000551594 ZNF561-AS1K7EIQ3 104 aa12.16□□□□□ -0.46
CTDSP2-207ENST00000551594 LEPROTL1O95214 131 aa12.16□□□□□ -0.46
CTDSP2-207ENST00000551594 FABP4P15090 132 aa12.16□□□□□ -0.46
CTDSP2-207ENST00000551594 SEC11AP67812 179 aa12.16□□□□□ -0.46
CTDSP2-207ENST00000551594 APOBP04114 4563 aaKnown RBP12.15□□□□□ -0.46
CTDSP2-207ENST00000551594 LINC00469Q8N7U9 141 aa12.15□□□□□ -0.46
CTDSP2-207ENST00000551594 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
CTDSP2-207ENST00000551594 SPAG11BQ08648 103 aa12.14□□□□□ -0.47
CTDSP2-207ENST00000551594 IGLC3P0DOY3 106 aa12.13□□□□□ -0.47
CTDSP2-207ENST00000551594 OR10D4PQ8NGN7 298 aa12.13□□□□□ -0.47
CTDSP2-207ENST00000551594 FAM30AQ9NZY2 134 aa12.13□□□□□ -0.47
CTDSP2-207ENST00000551594 IGLV5-45A0A087WSX0 123 aa12.12□□□□□ -0.47
CTDSP2-207ENST00000551594 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.12□□□□□ -0.47
CTDSP2-207ENST00000551594 H0Y8G0 127 aa12.12□□□□□ -0.47
CTDSP2-207ENST00000551594 COA6Q5JTJ3 125 aaKnown RBP12.12□□□□□ -0.47
CTDSP2-207ENST00000551594 LINC01561Q8N1V8 128 aa12.12□□□□□ -0.47
CTDSP2-207ENST00000551594 CHAC1Q9BUX1 264 aa12.12□□□□□ -0.47
CTDSP2-207ENST00000551594 CHTOPQ9Y3Y2 248 aaKnown RBP12.12□□□□□ -0.47
CTDSP2-207ENST00000551594 TRAV12-1A0A0B4J245 112 aa12.11□□□□□ -0.47
CTDSP2-207ENST00000551594 SYCNQ0VAF6 134 aa12.11□□□□□ -0.47
CTDSP2-207ENST00000551594 KIAA0087Q14695 138 aa12.11□□□□□ -0.47
CTDSP2-207ENST00000551594 HSPB8Q9UJY1 196 aa12.11□□□□□ -0.47
CTDSP2-207ENST00000551594 C11orf86A6NJI1 115 aa12.1□□□□□ -0.47
CTDSP2-207ENST00000551594 Q6ZRU5 148 aa12.1□□□□□ -0.47
CTDSP2-207ENST00000551594 CARD19Q96LW7 228 aa12.1□□□□□ -0.47
CTDSP2-207ENST00000551594 CAMK2N2Q96S95 79 aa12.1□□□□□ -0.47
CTDSP2-207ENST00000551594 SPINK8P0C7L1 97 aa12.09□□□□□ -0.47
CTDSP2-207ENST00000551594 C2orf48Q96LS8 159 aa12.09□□□□□ -0.47
CTDSP2-207ENST00000551594 PACRGQ96M98 296 aaPredicted RBP12.09□□□□□ -0.47
CTDSP2-207ENST00000551594 TOMM7Q9P0U1 55 aa12.09□□□□□ -0.47
CTDSP2-207ENST00000551594 KIAA1109Q2LD37 5005 aa12.08□□□□□ -0.48
CTDSP2-207ENST00000551594 SMIM1B2RUZ4 78 aa12.08□□□□□ -0.48
CTDSP2-207ENST00000551594 ZNF22P17026 224 aaPredicted RBP12.08□□□□□ -0.48
CTDSP2-207ENST00000551594 HAMPP81172 84 aa12.08□□□□□ -0.48
CTDSP2-207ENST00000551594 SDIM1Q6ZPB5 146 aa12.08□□□□□ -0.48
CTDSP2-207ENST00000551594 MRPL35Q9NZE8 188 aaKnown RBP12.08□□□□□ -0.48
CTDSP2-207ENST00000551594 HSPG2P98160 4391 aa12.07□□□□□ -0.48
CTDSP2-207ENST00000551594 C10orf25Q5T742 122 aa12.07□□□□□ -0.48
CTDSP2-207ENST00000551594 F8VRH5 84 aa12.06□□□□□ -0.48
CTDSP2-207ENST00000551594 ODF1Q14990 250 aa12.06□□□□□ -0.48
CTDSP2-207ENST00000551594 C2orf82Q6UX34 121 aa12.06□□□□□ -0.48
CTDSP2-207ENST00000551594 UNQ6190/PRO20217Q6UXQ8 127 aa12.06□□□□□ -0.48
CTDSP2-207ENST00000551594 H3BRM9 83 aa12.05□□□□□ -0.48
CTDSP2-207ENST00000551594 CDK2AP2O75956 126 aa12.05□□□□□ -0.48
CTDSP2-207ENST00000551594 XGP55808 180 aa12.05□□□□□ -0.48
CTDSP2-207ENST00000551594 TMEM170BQ5T4T1 132 aa12.05□□□□□ -0.48
CTDSP2-207ENST00000551594 RYR1P21817 5038 aa12.05□□□□□ -0.48
CTDSP2-207ENST00000551594 PANO1I0J062 215 aa12.04□□□□□ -0.48
CTDSP2-207ENST00000551594 NDUFA1O15239 70 aa12.04□□□□□ -0.48
CTDSP2-207ENST00000551594 PRSS2P07478 247 aa12.04□□□□□ -0.48
CTDSP2-207ENST00000551594 C6orf226Q5I0X4 101 aa12.04□□□□□ -0.48
CTDSP2-207ENST00000551594 Q6ZSA8 131 aa12.04□□□□□ -0.48
CTDSP2-207ENST00000551594 Q8IZM0 81 aa12.04□□□□□ -0.48
CTDSP2-207ENST00000551594 MAP1LC3CQ9BXW4 147 aa12.04□□□□□ -0.48
CTDSP2-207ENST00000551594 PMCHL2Q9BQD1 86 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms