RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 C11orf86A6NJI1 115 aa7.02□□□□□ -1.29
NEK3-203ENST00000551355 HERVK_113P61574 105 aa7.02□□□□□ -1.29
NEK3-203ENST00000551355 TMEM170BQ5T4T1 132 aa7.02□□□□□ -1.29
NEK3-203ENST00000551355 LINC01561Q8N1V8 128 aa7.02□□□□□ -1.29
NEK3-203ENST00000551355 LINC00469Q8N7U9 141 aa7.02□□□□□ -1.29
NEK3-203ENST00000551355 CHCHD10Q8WYQ3 142 aaPredicted RBP7.02□□□□□ -1.29
NEK3-203ENST00000551355 PMCHL2Q9BQD1 86 aa7.02□□□□□ -1.29
NEK3-203ENST00000551355 C1orf43Q9BWL3 253 aa7.02□□□□□ -1.29
NEK3-203ENST00000551355 NBDYA0A0U1RRE5 68 aa7.01□□□□□ -1.29
NEK3-203ENST00000551355 CLPSL2Q6UWE3 100 aa7.01□□□□□ -1.29
NEK3-203ENST00000551355 TM2D2Q9BX73 214 aa7.01□□□□□ -1.29
NEK3-203ENST00000551355 A0A087WZ39 114 aa7□□□□□ -1.29
NEK3-203ENST00000551355 IGHV3OR16-9A0A0B4J2B5 98 aa7□□□□□ -1.29
NEK3-203ENST00000551355 COX7A2LO14548 114 aa7□□□□□ -1.29
NEK3-203ENST00000551355 ZNF22P17026 224 aaPredicted RBP7□□□□□ -1.29
NEK3-203ENST00000551355 XCL1P47992 114 aa7□□□□□ -1.29
NEK3-203ENST00000551355 LINC00476Q8WZB0 136 aa7□□□□□ -1.29
NEK3-203ENST00000551355 VAMP8Q9BV40 100 aa7□□□□□ -1.29
NEK3-203ENST00000551355 TGP01266 2768 aa6.99□□□□□ -1.29
NEK3-203ENST00000551355 COX6A2Q02221 97 aa6.99□□□□□ -1.29
NEK3-203ENST00000551355 ATOH7Q8N100 152 aa6.99□□□□□ -1.29
NEK3-203ENST00000551355 CDKN2A-AS1Q9UH64 79 aa6.99□□□□□ -1.29
NEK3-203ENST00000551355 DNAH7Q8WXX0 4024 aa6.99□□□□□ -1.29
NEK3-203ENST00000551355 DYNC2H1Q8NCM8 4307 aaKnown RBP6.99□□□□□ -1.29
NEK3-203ENST00000551355 IGLV10-54A0A075B6I4 117 aa6.98□□□□□ -1.29
NEK3-203ENST00000551355 IGKV2D-24A0A075B6R9 120 aa6.98□□□□□ -1.29
NEK3-203ENST00000551355 TMEM223A0PJW6 202 aa6.98□□□□□ -1.29
NEK3-203ENST00000551355 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
NEK3-203ENST00000551355 APOMO95445 188 aa6.98□□□□□ -1.29
NEK3-203ENST00000551355 LY6G6CO95867 125 aa6.98□□□□□ -1.29
NEK3-203ENST00000551355 MALP21145 153 aa6.98□□□□□ -1.29
NEK3-203ENST00000551355 FOXI1Q12951 378 aa6.98□□□□□ -1.29
NEK3-203ENST00000551355 IGHV1-58A0A0C4DH39 117 aa6.97□□□□□ -1.29
NEK3-203ENST00000551355 E9PLD3 99 aa6.97□□□□□ -1.29
NEK3-203ENST00000551355 TNP2Q05952 138 aa6.97□□□□□ -1.29
NEK3-203ENST00000551355 CFAP161Q6P656 301 aa6.97□□□□□ -1.29
NEK3-203ENST00000551355 STPG4Q8N801 248 aa6.97□□□□□ -1.29
NEK3-203ENST00000551355 PLEKHB2Q96CS7 222 aa6.97□□□□□ -1.29
NEK3-203ENST00000551355 C12orf57Q99622 126 aa6.97□□□□□ -1.29
NEK3-203ENST00000551355 Q9HAA7 133 aa6.97□□□□□ -1.29
NEK3-203ENST00000551355 hDV102S1A0JD36 115 aa6.96□□□□□ -1.3
NEK3-203ENST00000551355 LEPROTO15243 131 aa6.96□□□□□ -1.3
NEK3-203ENST00000551355 SFTA2Q6UW10 78 aa6.96□□□□□ -1.3
NEK3-203ENST00000551355 C5orf38Q86SI9 138 aa6.96□□□□□ -1.3
NEK3-203ENST00000551355 LINC00518Q8N0U6 118 aa6.96□□□□□ -1.3
NEK3-203ENST00000551355 CSMD3Q7Z407 3707 aa6.95□□□□□ -1.3
NEK3-203ENST00000551355 IGLV5-39A0A0G2JS06 123 aa6.95□□□□□ -1.3
NEK3-203ENST00000551355 SMIM1B2RUZ4 78 aa6.95□□□□□ -1.3
NEK3-203ENST00000551355 SPATA45Q537H7 98 aa6.95□□□□□ -1.3
NEK3-203ENST00000551355 KRTAP26-1Q6PEX3 210 aa6.95□□□□□ -1.3
NEK3-203ENST00000551355 Q6ZR54 194 aa6.95□□□□□ -1.3
NEK3-203ENST00000551355 PAM16Q9Y3D7 125 aa6.95□□□□□ -1.3
NEK3-203ENST00000551355 IGHV3-64A0A075B6Q5 118 aa6.94□□□□□ -1.3
NEK3-203ENST00000551355 PRSS2P07478 247 aa6.94□□□□□ -1.3
NEK3-203ENST00000551355 SPINK8P0C7L1 97 aa6.94□□□□□ -1.3
NEK3-203ENST00000551355 LGALS3P17931 250 aaKnown RBP6.94□□□□□ -1.3
NEK3-203ENST00000551355 NMUP48645 174 aa6.94□□□□□ -1.3
NEK3-203ENST00000551355 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
NEK3-203ENST00000551355 F8WDY8 70 aa6.93□□□□□ -1.3
NEK3-203ENST00000551355 J3QQQ9 107 aa6.93□□□□□ -1.3
NEK3-203ENST00000551355 PSCAO43653 123 aa6.93□□□□□ -1.3
NEK3-203ENST00000551355 CXCL5P42830 114 aa6.93□□□□□ -1.3
NEK3-203ENST00000551355 MAJINQ3KP22 176 aa6.93□□□□□ -1.3
NEK3-203ENST00000551355 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
NEK3-203ENST00000551355 Q8IZM0 81 aa6.93□□□□□ -1.3
NEK3-203ENST00000551355 DLEU1O43261 78 aa6.92□□□□□ -1.3
NEK3-203ENST00000551355 C6orf226Q5I0X4 101 aa6.92□□□□□ -1.3
NEK3-203ENST00000551355 CDPF1Q6NVV7 123 aa6.92□□□□□ -1.3
NEK3-203ENST00000551355 C6orf223Q8N319 242 aa6.92□□□□□ -1.3
NEK3-203ENST00000551355 COX7B2Q8TF08 81 aa6.92□□□□□ -1.3
NEK3-203ENST00000551355 ORAOV1Q8WV07 137 aa6.92□□□□□ -1.3
NEK3-203ENST00000551355 STARD9Q9P2P6 4700 aa6.91□□□□□ -1.3
NEK3-203ENST00000551355 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
NEK3-203ENST00000551355 M0R2N4 97 aa6.91□□□□□ -1.3
NEK3-203ENST00000551355 COX8AP10176 69 aa6.91□□□□□ -1.3
NEK3-203ENST00000551355 C14orf177Q52M58 125 aa6.91□□□□□ -1.3
NEK3-203ENST00000551355 C1orf134Q5TEV5 83 aa6.91□□□□□ -1.3
NEK3-203ENST00000551355 TENM2Q9NT68 2774 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 GVQW2A0A096LPI5 108 aaPredicted RBP6.9□□□□□ -1.3
NEK3-203ENST00000551355 IGKV2D-26A0A0A0MRZ7 120 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 LCE6AA0A183 80 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 LINC00587B1AMM8 73 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 TSTD3H0UI37 97 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 ZNF561-AS1K7EIQ3 104 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 SMCPP49901 116 aaPredicted RBP6.9□□□□□ -1.3
NEK3-203ENST00000551355 CKS1BP61024 79 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 HERV-K104P63124 156 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 SLC25A34Q6PIV7 304 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 TOMM7Q9P0U1 55 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 NDUFA12Q9UI09 145 aa6.9□□□□□ -1.3
NEK3-203ENST00000551355 ZNF815PA8K554 130 aa6.89□□□□□ -1.31
NEK3-203ENST00000551355 NDUFA1O15239 70 aa6.89□□□□□ -1.31
NEK3-203ENST00000551355 SPAG11BQ08648 103 aa6.89□□□□□ -1.31
NEK3-203ENST00000551355 BOD1L2Q8IYS8 172 aa6.89□□□□□ -1.31
NEK3-203ENST00000551355 C2orf48Q96LS8 159 aa6.89□□□□□ -1.31
NEK3-203ENST00000551355 UQCR10Q9UDW1 63 aa6.89□□□□□ -1.31
NEK3-203ENST00000551355 PLECQ15149 4684 aaKnown RBP6.88□□□□□ -1.31
NEK3-203ENST00000551355 USP17L23D6RBM5 183 aa6.88□□□□□ -1.31
NEK3-203ENST00000551355 KIAA0087Q14695 138 aa6.88□□□□□ -1.31
NEK3-203ENST00000551355 Q6ZRN7 208 aaPredicted RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms