RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 USP17L23D6RBM5 183 aa8.74□□□□□ -1.01
ERBB3-219ENST00000551242 F5H768 121 aa8.74□□□□□ -1.01
ERBB3-219ENST00000551242 MIR7-3HGQ8N6C7 128 aa8.74□□□□□ -1.01
ERBB3-219ENST00000551242 SMIM11BQ8TCY0 68 aa8.74□□□□□ -1.01
ERBB3-219ENST00000551242 PRORYQ9H606 182 aa8.74□□□□□ -1.01
ERBB3-219ENST00000551242 USP9YO00507 2555 aaPredicted RBP8.74□□□□□ -1.01
ERBB3-219ENST00000551242 TRAV13-2A0A0B4J235 113 aa8.73□□□□□ -1.01
ERBB3-219ENST00000551242 IGHV4-61A0A0C4DH41 118 aa8.73□□□□□ -1.01
ERBB3-219ENST00000551242 SLPIP03973 132 aa8.73□□□□□ -1.01
ERBB3-219ENST00000551242 ZNF415Q09FC8 603 aa8.73□□□□□ -1.01
ERBB3-219ENST00000551242 TMEM258P61165 79 aa8.73□□□□□ -1.01
ERBB3-219ENST00000551242 SND1-IT1Q9HBX3 110 aa8.73□□□□□ -1.01
ERBB3-219ENST00000551242 Q6JHZ5 121 aa8.73□□□□□ -1.01
ERBB3-219ENST00000551242 C19orf84I3L1E1 186 aa8.72□□□□□ -1.01
ERBB3-219ENST00000551242 LECT2O14960 151 aa8.72□□□□□ -1.01
ERBB3-219ENST00000551242 USP24Q9UPU5 2620 aa8.72□□□□□ -1.01
ERBB3-219ENST00000551242 C11orf72Q8NBR9 251 aa8.72□□□□□ -1.01
ERBB3-219ENST00000551242 TOMM7Q9P0U1 55 aa8.72□□□□□ -1.01
ERBB3-219ENST00000551242 HILS1P60008 231 aa8.71□□□□□ -1.01
ERBB3-219ENST00000551242 WFDC9Q8NEX5 89 aa8.71□□□□□ -1.01
ERBB3-219ENST00000551242 HRCT1Q6UXD1 115 aa8.71□□□□□ -1.02
ERBB3-219ENST00000551242 NTM-AS1Q6ZSK4 140 aa8.71□□□□□ -1.02
ERBB3-219ENST00000551242 MYO9AB2RTY4 2548 aa8.7□□□□□ -1.02
ERBB3-219ENST00000551242 ABCA12Q86UK0 2595 aa8.7□□□□□ -1.02
ERBB3-219ENST00000551242 IGKV3OR2-268A0A0C4DH90 116 aa8.69□□□□□ -1.02
ERBB3-219ENST00000551242 PF4P02776 101 aa8.69□□□□□ -1.02
ERBB3-219ENST00000551242 LINC00158P58513 81 aa8.69□□□□□ -1.02
ERBB3-219ENST00000551242 CDC42SE2Q9NRR3 84 aa8.69□□□□□ -1.02
ERBB3-219ENST00000551242 AVPP01185 164 aa8.69□□□□□ -1.02
ERBB3-219ENST00000551242 FHL2Q14192 279 aa8.69□□□□□ -1.02
ERBB3-219ENST00000551242 DOPEY1Q5JWR5 2465 aa8.68□□□□□ -1.02
ERBB3-219ENST00000551242 IGHV4-59P01825 116 aa8.68□□□□□ -1.02
ERBB3-219ENST00000551242 RPL36AP83881 106 aaKnown RBP8.68□□□□□ -1.02
ERBB3-219ENST00000551242 RPL36ALQ969Q0 106 aaKnown RBP8.68□□□□□ -1.02
ERBB3-219ENST00000551242 OBSCN-AS1Q96MR7 158 aa8.68□□□□□ -1.02
ERBB3-219ENST00000551242 DEFB136Q30KP8 78 aa8.68□□□□□ -1.02
ERBB3-219ENST00000551242 TRAV25A0A0B4J276 109 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 CCL18P55774 89 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 Q5XG85 94 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 FAM19A3Q7Z5A8 133 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 C10orf105Q8TEF2 133 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 WNK1Q9H4A3 2382 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 TMEM89A2RUT3 159 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 TRGV1A0A0A0MS02 117 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 PFN2P35080 140 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 OVOL2Q9BRP0 275 aa8.67□□□□□ -1.02
ERBB3-219ENST00000551242 PTPN13Q12923 2485 aa8.66□□□□□ -1.02
ERBB3-219ENST00000551242 TRAV23DV6A0A075B6W5 121 aa8.66□□□□□ -1.02
ERBB3-219ENST00000551242 COX7B2Q8TF08 81 aa8.66□□□□□ -1.02
ERBB3-219ENST00000551242 XCL2Q9UBD3 114 aa8.66□□□□□ -1.02
ERBB3-219ENST00000551242 JMJD1CQ15652 2540 aa8.66□□□□□ -1.02
ERBB3-219ENST00000551242 WIPF1O43516 503 aa8.66□□□□□ -1.02
ERBB3-219ENST00000551242 SLURP1P55000 103 aa8.66□□□□□ -1.02
ERBB3-219ENST00000551242 H0YGX0 51 aa8.65□□□□□ -1.02
ERBB3-219ENST00000551242 SS18Q15532 418 aa8.65□□□□□ -1.02
ERBB3-219ENST00000551242 C18orf65Q6ZTR6 163 aa8.65□□□□□ -1.02
ERBB3-219ENST00000551242 PAX4O43316 350 aa8.65□□□□□ -1.03
ERBB3-219ENST00000551242 PRB1P04280 392 aa8.65□□□□□ -1.03
ERBB3-219ENST00000551242 FAM19A1Q7Z5A9 133 aa8.65□□□□□ -1.03
ERBB3-219ENST00000551242 AKAP9Q99996 3911 aa8.65□□□□□ -1.03
ERBB3-219ENST00000551242 GHRHP01286 108 aa8.64□□□□□ -1.03
ERBB3-219ENST00000551242 UBE2E2Q96LR5 201 aa8.64□□□□□ -1.03
ERBB3-219ENST00000551242 MXRA5Q9NR99 2828 aa8.64□□□□□ -1.03
ERBB3-219ENST00000551242 TLN2Q9Y4G6 2542 aa8.63□□□□□ -1.03
ERBB3-219ENST00000551242 SETD2Q9BYW2 2564 aaPredicted RBP8.63□□□□□ -1.03
ERBB3-219ENST00000551242 IGHV4-30-2A0A087WSY4 118 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 A8MTW9 85 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 UBE2L6O14933 153 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 DEFB112Q30KQ8 113 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 ENHOQ6UWT2 76 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 Q6ZTI0 123 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 C11orf68Q9H3H3 251 aaKnown RBP8.62□□□□□ -1.03
ERBB3-219ENST00000551242 CHD6Q8TD26 2715 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 K7EQD1 137 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 INSP01308 110 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 CCKP06307 115 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 MAP6D1Q9H9H5 199 aa8.62□□□□□ -1.03
ERBB3-219ENST00000551242 MSMBP08118 114 aa8.61□□□□□ -1.03
ERBB3-219ENST00000551242 ORMDL1Q9P0S3 153 aa8.61□□□□□ -1.03
ERBB3-219ENST00000551242 ANKRD17O75179 2603 aaKnown RBP8.61□□□□□ -1.03
ERBB3-219ENST00000551242 LOC100131303A0A0U1RQF7 123 aa8.6□□□□□ -1.03
ERBB3-219ENST00000551242 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
ERBB3-219ENST00000551242 FBN2P35556 2912 aa8.6□□□□□ -1.03
ERBB3-219ENST00000551242 RNASE1P07998 156 aaKnown RBP8.59□□□□□ -1.03
ERBB3-219ENST00000551242 NAV2Q8IVL1 2488 aa8.59□□□□□ -1.03
ERBB3-219ENST00000551242 PRR3P79522 188 aaKnown RBP8.59□□□□□ -1.03
ERBB3-219ENST00000551242 NIPBLQ6KC79 2804 aaeCLIP8.58□□□□□ -1.04
ERBB3-219ENST00000551242 CCDC168Q8NDH2 2452 aa8.58□□□□□ -1.04
ERBB3-219ENST00000551242 IGLV4-60A0A075B6I1 120 aa8.58□□□□□ -1.04
ERBB3-219ENST00000551242 KHDC1LQ5JSQ8 128 aa8.58□□□□□ -1.04
ERBB3-219ENST00000551242 C1orf158Q8N1D5 194 aa8.58□□□□□ -1.04
ERBB3-219ENST00000551242 TRBV10-1A0A0K0K1A3 114 aa8.57□□□□□ -1.04
ERBB3-219ENST00000551242 TRBV6-4A0A1B0GX49 114 aa8.57□□□□□ -1.04
ERBB3-219ENST00000551242 IBA57-AS1B1ANH7 110 aa8.57□□□□□ -1.04
ERBB3-219ENST00000551242 NDUFC2O95298 119 aa8.56□□□□□ -1.04
ERBB3-219ENST00000551242 IGHV3OR16-9A0A0B4J2B5 98 aa8.56□□□□□ -1.04
ERBB3-219ENST00000551242 XCL1P47992 114 aa8.56□□□□□ -1.04
ERBB3-219ENST00000551242 CCL19Q99731 98 aa8.56□□□□□ -1.04
ERBB3-219ENST00000551242 NOP10Q9NPE3 64 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms