RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 Q6ZR54 194 aa3.86□□□□□ -1.79
SCAF11-213ENST00000550629 OR5A1Q8NGJ0 315 aa3.86□□□□□ -1.79
SCAF11-213ENST00000550629 TOMM6Q96B49 74 aa3.86□□□□□ -1.79
SCAF11-213ENST00000550629 PRR34Q9NV39 138 aa3.86□□□□□ -1.79
SCAF11-213ENST00000550629 UBE2D4Q9Y2X8 147 aa3.86□□□□□ -1.79
SCAF11-213ENST00000550629 DYNC2H1Q8NCM8 4307 aaKnown RBP3.86□□□□□ -1.79
SCAF11-213ENST00000550629 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-213ENST00000550629 TRAV8-3A0A0A6YYJ7 113 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 IGKV2-29A2NJV5 120 aaPredicted RBP3.85□□□□□ -1.79
SCAF11-213ENST00000550629 IGIPA6NJ69 53 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 IBA57-AS1B1ANH7 110 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 CCL25O15444 150 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 HSBP1O75506 76 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 SERF1AO75920 110 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 HBDP02042 147 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 MPV17L2Q567V2 206 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 C2orf66Q6UXQ4 117 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 ERASQ7Z444 233 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 TMEM141Q96I45 108 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 TIMM17AQ99595 171 aa3.85□□□□□ -1.79
SCAF11-213ENST00000550629 TRAV8-4A0A0B4J246 113 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 IGHV3-30P01768 117 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 IGHV3-33P01772 117 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 ANGP03950 147 aaKnown RBP3.84□□□□□ -1.79
SCAF11-213ENST00000550629 IGHV3-30-3P0DP02 117 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 IGHV3-30-5P0DP03 117 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 RPL39P62891 51 aaKnown RBP3.84□□□□□ -1.79
SCAF11-213ENST00000550629 RPL24P83731 157 aaKnown RBP3.84□□□□□ -1.79
SCAF11-213ENST00000550629 MIAQ16674 131 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 PDZD11Q5EBL8 140 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 LINC00269Q8N2A0 174 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 ZNF664Q8N3J9 261 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 Q8N976 141 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 DEFB104AQ8WTQ1 72 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 RMI2Q96E14 147 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 PACRGQ96M98 296 aaPredicted RBP3.84□□□□□ -1.79
SCAF11-213ENST00000550629 SCGB3A1Q96QR1 104 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 CDC42SE2Q9NRR3 84 aa3.84□□□□□ -1.79
SCAF11-213ENST00000550629 IGLV4-60A0A075B6I1 120 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 IGLV4-3A0A075B6K6 122 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 A0A096LNJ9 63 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-213ENST00000550629 ATP5LO75964 103 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 CRPP02741 224 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 REG3AQ06141 175 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 Q6ZN92 141 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 FAM104AQ969W3 186 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 KLK12Q9UKR0 248 aa3.83□□□□□ -1.8
SCAF11-213ENST00000550629 IGLV5-45A0A087WSX0 123 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 C1orf134Q5TEV5 83 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 ENHOQ6UWT2 76 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 TEX43Q6ZNM6 134 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 Q6ZUT4 128 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 C6orf223Q8N319 242 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 UBE2WQ96B02 151 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 AMELXQ99217 191 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 C2orf88Q9BSF0 95 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 VCX2Q9H322 139 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 HSPB8Q9UJY1 196 aa3.82□□□□□ -1.8
SCAF11-213ENST00000550629 LINC00959A0A1B0GUT2 108 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 LEPROTL1O95214 131 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 S100A6P06703 90 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 NDUFA6P56556 154 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 SEC11AP67812 179 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 PMVKQ15126 192 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 SS18Q15532 418 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 PMCHL1Q16048 86 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 C14orf177Q52M58 125 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 FAM19A3Q7Z5A8 133 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 CST9LQ9H4G1 147 aa3.81□□□□□ -1.8
SCAF11-213ENST00000550629 PLECQ15149 4684 aaKnown RBP3.81□□□□□ -1.8
SCAF11-213ENST00000550629 TRAV12-1A0A0B4J245 112 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 M0R2N4 97 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 NUPR1O60356 82 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 UBE2D1P51668 147 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 CD164L2Q6UWJ8 174 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 Q6ZRN7 208 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-213ENST00000550629 LINC00173Q6ZV60 143 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 SPATA12Q7Z6I5 190 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 FAM19A2Q8N3H0 131 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 BAALCQ8WXS3 180 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 CHCHD10Q8WYQ3 142 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-213ENST00000550629 IFI27L1Q96BM0 104 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 LITAFQ99732 161 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 OPRPNQ99935 248 aaPredicted RBP3.8□□□□□ -1.8
SCAF11-213ENST00000550629 Q9HAA7 133 aa3.8□□□□□ -1.8
SCAF11-213ENST00000550629 KMT2CQ8NEZ4 4911 aaKnown RBP3.8□□□□□ -1.8
SCAF11-213ENST00000550629 IGKV2D-24A0A075B6R9 120 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 TRAV13-1A0A0B4J241 112 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 TINCRA0A1B0GVN0 87 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 C5orf52A6NGY3 159 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 AKR1D1P51857 326 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 LINC00242Q5T6M2 205 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 KRTAP26-1Q6PEX3 210 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 CLPSL2Q6UWE3 100 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 LINC00336Q6ZUF6 198 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 HIST3H2BBQ8N257 126 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 LYSTQ99698 3801 aa3.79□□□□□ -1.8
SCAF11-213ENST00000550629 MAP1LC3CQ9BXW4 147 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms