RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 HLA-DMBP28068 263 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 HLA-DRB3P79483 266 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 MSMO1Q15800 293 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 C10orf128Q5T292 105 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 SCGB1D4Q6XE38 83 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 Q6ZRU5 148 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 ZCCHC23Q6ZST2 131 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 RAB37Q96AX2 223 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 NAA38Q9BRA0 125 aaKnown RBP2.12□□□□□ -2.07
LIMA1-205ENST00000550592 MRPL32Q9BYC8 188 aaKnown RBP2.12□□□□□ -2.07
LIMA1-205ENST00000550592 PBOV1Q9GZY1 135 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 TMEM191AQ9H0A3 160 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 NDUFB11Q9NX14 153 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 SPCS1Q9Y6A9 102 aa2.12□□□□□ -2.07
LIMA1-205ENST00000550592 TRDV1A0A1B0GX56 115 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 ARRDC5A6NEK1 342 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 ZNF727A8MUV8 499 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 C17orf112F2Z3M2 114 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 YPEL1O60688 119 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 NDUFB6O95139 128 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 ZNF682O95780 498 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 PRH1P02810 166 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 IGHV3-30-3P0DP02 117 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 KRTDAPP60985 99 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 ZNF90Q03938 601 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 PMAIP1Q13794 54 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 MPV17LQ2QL34 196 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 BVES-AS1Q5T3Y7 98 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 C9orf153Q5TBE3 101 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 Q6AWC8 147 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 Q6ZUT4 128 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 BAGE3Q86Y29 109 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 BAGE2Q86Y30 109 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 OR4K13Q8NH42 304 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 ATP6V0E2Q8NHE4 81 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 COPS9Q8WXC6 57 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 PLEKHB2Q96CS7 222 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 ADAT3Q96EY9 351 aaPredicted RBP2.11□□□□□ -2.07
LIMA1-205ENST00000550592 AQP10Q96PS8 301 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 YPEL2Q96QA6 119 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 UPK3BQ9BT76 320 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 CHST6Q9GZX3 395 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 CST11Q9H112 138 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 ABRACLQ9P1F3 81 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 PCTPQ9UKL6 214 aa2.11□□□□□ -2.07
LIMA1-205ENST00000550592 LOC107984640A0A0U1RRK4 108 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 FAM236DA0A1B0GTK5 79 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 A0A1W2PPM0 123 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 H3BUT2 72 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 DEFB4AO15263 64 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 ARL6IP5O75915 188 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 TRACP01848 142 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 TFF1P04155 84 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 ATP5G1P05496 136 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 SMIM13P0DJ93 91 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 FAM236CP0DP71 79 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 BCL2P10415 239 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 SLC25A6P12236 298 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 ATP5G3P48201 142 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 HERVK_113P63121 156 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 HAMPP81172 84 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 MRPL51Q4U2R6 128 aaKnown RBP2.1□□□□□ -2.07
LIMA1-205ENST00000550592 IBA57Q5T440 356 aaKnown RBP2.1□□□□□ -2.07
LIMA1-205ENST00000550592 ZNF322Q6U7Q0 402 aaPredicted RBP2.1□□□□□ -2.07
LIMA1-205ENST00000550592 HRCT1Q6UXD1 115 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 TMEM91Q6ZNR0 172 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 ANKRD29Q8N6D5 301 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 OR2T10Q8NGZ9 312 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 MRPL30Q8TCC3 161 aaKnown RBP2.1□□□□□ -2.07
LIMA1-205ENST00000550592 C18orf32Q8TCD1 76 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 DYNLRB2Q8TF09 96 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 GNB1LQ9BYB4 327 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 NAA60Q9H7X0 242 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 MPC1Q9Y5U8 109 aa2.1□□□□□ -2.07
LIMA1-205ENST00000550592 FAT3Q8TDW7 4589 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 TRBV20-1A0A075B6N2 111 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 TRAV14DV4A0A0A6YYC5 116 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 MUC21A0A0G2JKD1 596 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 MUC21A0A140T8X8 626 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 C3orf85A0A1B0GTC6 90 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 FAM24AA6NFZ4 105 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 A8MT66 165 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 LY6LH3BQJ8 138 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 BUB1B-PAK6H3BSN5 160 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 UQCRQO14949 82 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 APOMO95445 188 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 NCR2O95944 276 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 NAPSAO96009 420 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 HLA-DRB1P01911 266 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 MT-ATP8P03928 68 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 SLC25A5P05141 298 aaKnown RBP2.09□□□□□ -2.07
LIMA1-205ENST00000550592 MT1HL1P0DM35 61 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 LPAR6P43657 344 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 DAPP51397 102 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 H2BFSP57053 126 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 TAS2R45P59539 299 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 YPEL3P61236 119 aaPredicted RBP2.09□□□□□ -2.07
LIMA1-205ENST00000550592 DAD1P61803 113 aa2.09□□□□□ -2.07
LIMA1-205ENST00000550592 SLC38A11Q08AI6 406 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms