RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 LINC01551Q86U37 167 aa4.71□□□□□ -1.66
NEK3-201ENST00000550331 AMN1Q8IY45 258 aa4.71□□□□□ -1.66
NEK3-201ENST00000550331 MUC2Q02817 5179 aa4.71□□□□□ -1.66
NEK3-201ENST00000550331 APOMO95445 188 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 FCER1GP30273 86 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 CEBPGP53567 150 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 GAGE2BQ13066 116 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 NUP35Q8NFH5 326 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 C2orf48Q96LS8 159 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 CAMK2N2Q96S95 79 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 SMIM7Q9BQ49 75 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 OSTCQ9NRP0 149 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 UBE2D4Q9Y2X8 147 aa4.7□□□□□ -1.66
NEK3-201ENST00000550331 PPP1R2P9O14990 202 aa4.69□□□□□ -1.66
NEK3-201ENST00000550331 SUMO2P61956 95 aaKnown RBP4.69□□□□□ -1.66
NEK3-201ENST00000550331 RIGQ13278 110 aa4.69□□□□□ -1.66
NEK3-201ENST00000550331 ALKAL2Q6UX46 152 aa4.69□□□□□ -1.66
NEK3-201ENST00000550331 NRACQ8N912 160 aa4.69□□□□□ -1.66
NEK3-201ENST00000550331 KIR2DL4Q99706 377 aa4.69□□□□□ -1.66
NEK3-201ENST00000550331 TIMM21Q9BVV7 248 aa4.69□□□□□ -1.66
NEK3-201ENST00000550331 TRAV13-1A0A0B4J241 112 aa4.68□□□□□ -1.66
NEK3-201ENST00000550331 A0A1W2PNN7 141 aa4.68□□□□□ -1.66
NEK3-201ENST00000550331 ZNF727A8MUV8 499 aa4.68□□□□□ -1.66
NEK3-201ENST00000550331 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.68□□□□□ -1.66
NEK3-201ENST00000550331 RNF151Q2KHN1 245 aa4.68□□□□□ -1.66
NEK3-201ENST00000550331 C9orf116Q5BN46 136 aaPredicted RBP4.68□□□□□ -1.66
NEK3-201ENST00000550331 OR10D4PQ8NGN7 298 aa4.68□□□□□ -1.66
NEK3-201ENST00000550331 TMEM18Q96B42 140 aa4.68□□□□□ -1.66
NEK3-201ENST00000550331 EIF5A2Q9GZV4 153 aaKnown RBP4.68□□□□□ -1.66
NEK3-201ENST00000550331 V9GYV3 84 aa4.68□□□□□ -1.66
NEK3-201ENST00000550331 F8WDY8 70 aa4.67□□□□□ -1.66
NEK3-201ENST00000550331 SMKR1H3BMG3 65 aa4.67□□□□□ -1.66
NEK3-201ENST00000550331 TCAPO15273 167 aa4.67□□□□□ -1.66
NEK3-201ENST00000550331 RPL18AQ02543 176 aaKnown RBP4.67□□□□□ -1.66
NEK3-201ENST00000550331 SPAG11BQ08648 103 aa4.67□□□□□ -1.66
NEK3-201ENST00000550331 RNASE13Q5GAN3 156 aaKnown RBP4.67□□□□□ -1.66
NEK3-201ENST00000550331 Q6ZUT4 128 aa4.67□□□□□ -1.66
NEK3-201ENST00000550331 C20orf78Q9BR46 151 aa4.67□□□□□ -1.66
NEK3-201ENST00000550331 NAT8BQ9UHF3 227 aa4.67□□□□□ -1.66
NEK3-201ENST00000550331 PSORS1C2Q9UIG4 136 aa4.67□□□□□ -1.66
NEK3-201ENST00000550331 TRBV24-1A0A075B6N3 115 aa4.66□□□□□ -1.66
NEK3-201ENST00000550331 LINC00862A6NCI5 91 aa4.66□□□□□ -1.66
NEK3-201ENST00000550331 MT-ND6P03923 174 aa4.66□□□□□ -1.66
NEK3-201ENST00000550331 SRP19P09132 144 aaKnown RBP4.66□□□□□ -1.66
NEK3-201ENST00000550331 RPL32P62910 135 aaKnown RBP4.66□□□□□ -1.66
NEK3-201ENST00000550331 MRPL51Q4U2R6 128 aaKnown RBP4.66□□□□□ -1.66
NEK3-201ENST00000550331 FAM104BQ5XKR9 115 aa4.66□□□□□ -1.66
NEK3-201ENST00000550331 C5orf38Q86SI9 138 aa4.66□□□□□ -1.66
NEK3-201ENST00000550331 AKAP14Q86UN6 197 aa4.66□□□□□ -1.66
NEK3-201ENST00000550331 MRPL35Q9NZE8 188 aaKnown RBP4.66□□□□□ -1.66
NEK3-201ENST00000550331 IGHV3OR16-9A0A0B4J2B5 98 aa4.65□□□□□ -1.67
NEK3-201ENST00000550331 A0A1B0GW15 77 aa4.65□□□□□ -1.67
NEK3-201ENST00000550331 FAM74A3Q4VXF1 159 aa4.65□□□□□ -1.67
NEK3-201ENST00000550331 C1orf137Q5JT78 98 aa4.65□□□□□ -1.67
NEK3-201ENST00000550331 IMMP2LQ96T52 175 aa4.65□□□□□ -1.67
NEK3-201ENST00000550331 OPRPNQ99935 248 aaPredicted RBP4.65□□□□□ -1.67
NEK3-201ENST00000550331 SPANXA1Q9NS26 97 aa4.65□□□□□ -1.67
NEK3-201ENST00000550331 SMIM27A0A1W2PRY6 76 aa4.64□□□□□ -1.67
NEK3-201ENST00000550331 NDUFA1O15239 70 aa4.64□□□□□ -1.67
NEK3-201ENST00000550331 IGLV7-43P04211 117 aa4.64□□□□□ -1.67
NEK3-201ENST00000550331 TLX1NBP0CAT3 122 aa4.64□□□□□ -1.67
NEK3-201ENST00000550331 RPL23P62829 140 aaKnown RBP4.64□□□□□ -1.67
NEK3-201ENST00000550331 MRPS36P82909 103 aaKnown RBP4.64□□□□□ -1.67
NEK3-201ENST00000550331 TMEM241Q24JQ0 296 aa4.64□□□□□ -1.67
NEK3-201ENST00000550331 PHF5AQ7RTV0 110 aaKnown RBP4.64□□□□□ -1.67
NEK3-201ENST00000550331 ORAOV1Q8WV07 137 aa4.64□□□□□ -1.67
NEK3-201ENST00000550331 DIRC1Q969H9 104 aa4.64□□□□□ -1.67
NEK3-201ENST00000550331 SMIM2Q9BVW6 85 aa4.64□□□□□ -1.67
NEK3-201ENST00000550331 S100A8P05109 93 aa4.63□□□□□ -1.67
NEK3-201ENST00000550331 CKS2P33552 79 aa4.63□□□□□ -1.67
NEK3-201ENST00000550331 RPL39P62891 51 aaKnown RBP4.63□□□□□ -1.67
NEK3-201ENST00000550331 HBBP68871 147 aa4.63□□□□□ -1.67
NEK3-201ENST00000550331 ADIRFQ15847 76 aa4.63□□□□□ -1.67
NEK3-201ENST00000550331 FAM104AQ969W3 186 aa4.63□□□□□ -1.67
NEK3-201ENST00000550331 NAT8Q9UHE5 227 aa4.63□□□□□ -1.67
NEK3-201ENST00000550331 A0A0U1RQV1 116 aa4.62□□□□□ -1.67
NEK3-201ENST00000550331 IFITM10A6NMD0 228 aa4.62□□□□□ -1.67
NEK3-201ENST00000550331 F8W036 122 aa4.62□□□□□ -1.67
NEK3-201ENST00000550331 H0Y9J4 135 aa4.62□□□□□ -1.67
NEK3-201ENST00000550331 PPBPP02775 128 aa4.62□□□□□ -1.67
NEK3-201ENST00000550331 SMDT1Q9H4I9 107 aa4.62□□□□□ -1.67
NEK3-201ENST00000550331 C6orf48Q9UBA6 75 aa4.62□□□□□ -1.67
NEK3-201ENST00000550331 A0A087WZ39 114 aa4.61□□□□□ -1.67
NEK3-201ENST00000550331 TGIF2-C20orf24A0A0A6YYL0 155 aa4.61□□□□□ -1.67
NEK3-201ENST00000550331 FAM168BA1KXE4 195 aa4.61□□□□□ -1.67
NEK3-201ENST00000550331 D6R8Y8 96 aa4.61□□□□□ -1.67
NEK3-201ENST00000550331 NPYP01303 97 aa4.61□□□□□ -1.67
NEK3-201ENST00000550331 IFI27P40305 119 aaPredicted RBP4.61□□□□□ -1.67
NEK3-201ENST00000550331 C10orf25Q5T742 122 aa4.61□□□□□ -1.67
NEK3-201ENST00000550331 UNQ6190/PRO20217Q6UXQ8 127 aa4.61□□□□□ -1.67
NEK3-201ENST00000550331 FAM19A5Q7Z5A7 132 aaPredicted RBP4.61□□□□□ -1.67
NEK3-201ENST00000550331 PRR26Q8N8Z3 221 aa4.61□□□□□ -1.67
NEK3-201ENST00000550331 PYGO1Q9Y3Y4 419 aa4.61□□□□□ -1.67
NEK3-201ENST00000550331 IGLV1-50A0A075B6I6 118 aa4.6□□□□□ -1.67
NEK3-201ENST00000550331 TRBV30A0A0K0K1B3 111 aa4.6□□□□□ -1.67
NEK3-201ENST00000550331 A0A1B0GXF2 115 aa4.6□□□□□ -1.67
NEK3-201ENST00000550331 C9JQL5 133 aa4.6□□□□□ -1.67
NEK3-201ENST00000550331 KRTAP10-6P60371 365 aaPredicted RBP4.6□□□□□ -1.67
NEK3-201ENST00000550331 KIAA0087Q14695 138 aa4.6□□□□□ -1.67
NEK3-201ENST00000550331 PEA15Q15121 130 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms