RNA–Protein interactions for RNA: ENST00000550254.1

TUBA1A-206, Transcript of tubulin alpha 1a, humanhuman

TSL 2

Gene TUBA1A, Length 696 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-206ENST00000550254 GNB1LQ9BYB4 327 aa11.39□□□□□ -0.59
TUBA1A-206ENST00000550254 RPS10P5Q9NQ39 176 aa11.39□□□□□ -0.59
TUBA1A-206ENST00000550254 A0A096LNI7 61 aa11.38□□□□□ -0.59
TUBA1A-206ENST00000550254 K7EMI3 77 aa11.38□□□□□ -0.59
TUBA1A-206ENST00000550254 ORMDL2Q53FV1 153 aa11.38□□□□□ -0.59
TUBA1A-206ENST00000550254 TMEM141Q96I45 108 aa11.38□□□□□ -0.59
TUBA1A-206ENST00000550254 NXT2Q9NPJ8 142 aaKnown RBP11.38□□□□□ -0.59
TUBA1A-206ENST00000550254 PLAC8Q9NZF1 115 aa11.38□□□□□ -0.59
TUBA1A-206ENST00000550254 CYSLTR1Q9Y271 337 aa11.38□□□□□ -0.59
TUBA1A-206ENST00000550254 FLG2Q5D862 2391 aaPredicted RBP11.38□□□□□ -0.59
TUBA1A-206ENST00000550254 IGKV2-24A0A0C4DH68 120 aa11.37□□□□□ -0.59
TUBA1A-206ENST00000550254 RPL37AP61513 92 aaKnown RBP11.37□□□□□ -0.59
TUBA1A-206ENST00000550254 Q6ZRU5 148 aa11.37□□□□□ -0.59
TUBA1A-206ENST00000550254 APOMO95445 188 aa11.36□□□□□ -0.59
TUBA1A-206ENST00000550254 MAJINQ3KP22 176 aa11.36□□□□□ -0.59
TUBA1A-206ENST00000550254 ZC2HC1BQ5TFG8 222 aa11.36□□□□□ -0.59
TUBA1A-206ENST00000550254 C2orf48Q96LS8 159 aa11.36□□□□□ -0.59
TUBA1A-206ENST00000550254 IGIPA6NJ69 53 aa11.35□□□□□ -0.59
TUBA1A-206ENST00000550254 LINC00242Q5T6M2 205 aa11.35□□□□□ -0.59
TUBA1A-206ENST00000550254 LINC00173Q6ZV60 143 aa11.35□□□□□ -0.59
TUBA1A-206ENST00000550254 ALKBH7Q9BT30 221 aaPredicted RBP11.35□□□□□ -0.59
TUBA1A-206ENST00000550254 SPAG11BQ08648 103 aa11.34□□□□□ -0.59
TUBA1A-206ENST00000550254 COX19Q49B96 90 aa11.34□□□□□ -0.59
TUBA1A-206ENST00000550254 TEX43Q6ZNM6 134 aa11.34□□□□□ -0.59
TUBA1A-206ENST00000550254 OR10D4PQ8NGN7 298 aa11.34□□□□□ -0.59
TUBA1A-206ENST00000550254 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
TUBA1A-206ENST00000550254 AMELXQ99217 191 aa11.34□□□□□ -0.59
TUBA1A-206ENST00000550254 UBE2D1P51668 147 aa11.33□□□□□ -0.6
TUBA1A-206ENST00000550254 STPG4Q8N801 248 aa11.33□□□□□ -0.6
TUBA1A-206ENST00000550254 ORAOV1Q8WV07 137 aa11.33□□□□□ -0.6
TUBA1A-206ENST00000550254 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
TUBA1A-206ENST00000550254 APOC3P02656 99 aa11.32□□□□□ -0.6
TUBA1A-206ENST00000550254 NPSP0C0P6 89 aa11.32□□□□□ -0.6
TUBA1A-206ENST00000550254 HNRNPA3P51991 378 aaKnown RBP11.32□□□□□ -0.6
TUBA1A-206ENST00000550254 HERC1Q15751 4861 aa11.31□□□□□ -0.6
TUBA1A-206ENST00000550254 A0A087WZ39 114 aa11.31□□□□□ -0.6
TUBA1A-206ENST00000550254 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
TUBA1A-206ENST00000550254 LINC01546A6NGU7 62 aa11.31□□□□□ -0.6
TUBA1A-206ENST00000550254 MT-ND6P03923 174 aa11.31□□□□□ -0.6
TUBA1A-206ENST00000550254 TOMM6Q96B49 74 aa11.31□□□□□ -0.6
TUBA1A-206ENST00000550254 VCX2Q9H322 139 aa11.31□□□□□ -0.6
TUBA1A-206ENST00000550254 PKIGQ9Y2B9 76 aa11.31□□□□□ -0.6
TUBA1A-206ENST00000550254 PKHD1L1Q86WI1 4243 aa11.31□□□□□ -0.6
TUBA1A-206ENST00000550254 LOC107984640A0A0U1RRK4 108 aa11.3□□□□□ -0.6
TUBA1A-206ENST00000550254 FABP9Q0Z7S8 132 aa11.3□□□□□ -0.6
TUBA1A-206ENST00000550254 Q6ZN92 141 aa11.3□□□□□ -0.6
TUBA1A-206ENST00000550254 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
TUBA1A-206ENST00000550254 LINC00474Q9P2X8 69 aa11.3□□□□□ -0.6
TUBA1A-206ENST00000550254 LRP1Q07954 4544 aaKnown RBP11.29□□□□□ -0.6
TUBA1A-206ENST00000550254 A0A0J9YXV3 536 aa11.29□□□□□ -0.6
TUBA1A-206ENST00000550254 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.29□□□□□ -0.6
TUBA1A-206ENST00000550254 G0S2P27469 103 aa11.29□□□□□ -0.6
TUBA1A-206ENST00000550254 PTTG1IPP53801 180 aa11.29□□□□□ -0.6
TUBA1A-206ENST00000550254 FAM19A3Q7Z5A8 133 aa11.29□□□□□ -0.6
TUBA1A-206ENST00000550254 TIMM17AQ99595 171 aa11.29□□□□□ -0.6
TUBA1A-206ENST00000550254 KRTAP29-1A8MX34 341 aaPredicted RBP11.28□□□□□ -0.6
TUBA1A-206ENST00000550254 SNAPINO95295 136 aa11.28□□□□□ -0.6
TUBA1A-206ENST00000550254 GAGE2BQ13066 116 aa11.28□□□□□ -0.6
TUBA1A-206ENST00000550254 KIAA0087Q14695 138 aa11.28□□□□□ -0.6
TUBA1A-206ENST00000550254 RNF151Q2KHN1 245 aa11.28□□□□□ -0.6
TUBA1A-206ENST00000550254 FAT3Q8TDW7 4589 aa11.27□□□□□ -0.6
TUBA1A-206ENST00000550254 F8WDY8 70 aa11.27□□□□□ -0.61
TUBA1A-206ENST00000550254 C10orf25Q5T742 122 aa11.27□□□□□ -0.61
TUBA1A-206ENST00000550254 SVBPQ8N300 66 aa11.27□□□□□ -0.61
TUBA1A-206ENST00000550254 MRPL35Q9NZE8 188 aaKnown RBP11.27□□□□□ -0.61
TUBA1A-206ENST00000550254 NDUFA5Q16718 116 aa11.26□□□□□ -0.61
TUBA1A-206ENST00000550254 UNQ6190/PRO20217Q6UXQ8 127 aa11.26□□□□□ -0.61
TUBA1A-206ENST00000550254 ERASQ7Z444 233 aa11.26□□□□□ -0.61
TUBA1A-206ENST00000550254 LINC01561Q8N1V8 128 aa11.26□□□□□ -0.61
TUBA1A-206ENST00000550254 NDUFA1O15239 70 aa11.25□□□□□ -0.61
TUBA1A-206ENST00000550254 PAPPA-AS1Q5QFB9 102 aa11.25□□□□□ -0.61
TUBA1A-206ENST00000550254 C7orf33Q8WU49 177 aa11.25□□□□□ -0.61
TUBA1A-206ENST00000550254 SCGB3A1Q96QR1 104 aa11.25□□□□□ -0.61
TUBA1A-206ENST00000550254 TRAPPC1Q9Y5R8 145 aa11.25□□□□□ -0.61
TUBA1A-206ENST00000550254 A0A1W2PNN7 141 aa11.24□□□□□ -0.61
TUBA1A-206ENST00000550254 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
TUBA1A-206ENST00000550254 DMBT1Q9UGM3 2413 aaPredicted RBP11.23□□□□□ -0.61
TUBA1A-206ENST00000550254 J3QL48 77 aa11.23□□□□□ -0.61
TUBA1A-206ENST00000550254 RPL18AQ02543 176 aaKnown RBP11.23□□□□□ -0.61
TUBA1A-206ENST00000550254 FA2HQ7L5A8 372 aa11.23□□□□□ -0.61
TUBA1A-206ENST00000550254 URB1-AS1Q96HZ7 61 aa11.23□□□□□ -0.61
TUBA1A-206ENST00000550254 C18orf32Q8TCD1 76 aa11.22□□□□□ -0.61
TUBA1A-206ENST00000550254 YPEL4Q96NS1 127 aa11.22□□□□□ -0.61
TUBA1A-206ENST00000550254 LINC01549A6NIU2 74 aa11.21□□□□□ -0.61
TUBA1A-206ENST00000550254 TLX1NBP0CAT3 122 aa11.21□□□□□ -0.61
TUBA1A-206ENST00000550254 HERVK_113P63121 156 aa11.21□□□□□ -0.61
TUBA1A-206ENST00000550254 C2orf82Q6UX34 121 aa11.21□□□□□ -0.61
TUBA1A-206ENST00000550254 SMCO4Q9NRQ5 59 aa11.21□□□□□ -0.61
TUBA1A-206ENST00000550254 CDKN2A-AS1Q9UH64 79 aa11.21□□□□□ -0.61
TUBA1A-206ENST00000550254 A0A096LNJ9 63 aa11.2□□□□□ -0.62
TUBA1A-206ENST00000550254 OXTP01178 125 aa11.2□□□□□ -0.62
TUBA1A-206ENST00000550254 SEC11AP67812 179 aa11.2□□□□□ -0.62
TUBA1A-206ENST00000550254 Q6ZRP5 223 aa11.2□□□□□ -0.62
TUBA1A-206ENST00000550254 PRR3P79522 188 aaKnown RBP11.19□□□□□ -0.62
TUBA1A-206ENST00000550254 C9orf116Q5BN46 136 aaPredicted RBP11.19□□□□□ -0.62
TUBA1A-206ENST00000550254 LINC00614P0C842 121 aa11.18□□□□□ -0.62
TUBA1A-206ENST00000550254 CST9LQ9H4G1 147 aa11.18□□□□□ -0.62
TUBA1A-206ENST00000550254 GEMIN7Q9H840 131 aaKnown RBP11.18□□□□□ -0.62
TUBA1A-206ENST00000550254 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
TUBA1A-206ENST00000550254 Q8IZM0 81 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms