RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 TMEM250H0YL14 139 aa5.91□□□□□ -1.46
TRAFD1-207ENST00000550051 FCER1GP30273 86 aa5.91□□□□□ -1.46
TRAFD1-207ENST00000550051 SPAG11BQ08648 103 aa5.91□□□□□ -1.46
TRAFD1-207ENST00000550051 IGHV3OR16-9A0A0B4J2B5 98 aa5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 FAM168BA1KXE4 195 aa5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 HIGD1CA8MV81 97 aa5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 RPL13AP40429 203 aaKnown RBP5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 SUMO2P61956 95 aaKnown RBP5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 PRR4Q16378 134 aa5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 RNASE13Q5GAN3 156 aaKnown RBP5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 AMN1Q8IY45 258 aa5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 NRACQ8N912 160 aa5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 TMEM18Q96B42 140 aa5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 KIR2DL4Q99706 377 aa5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 KRTAP4-8Q9BYQ9 185 aa5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 CARHSP1Q9Y2V2 147 aaKnown RBP5.9□□□□□ -1.46
TRAFD1-207ENST00000550051 UNQ6190/PRO20217Q6UXQ8 127 aa5.89□□□□□ -1.47
TRAFD1-207ENST00000550051 Q6ZUT4 128 aa5.89□□□□□ -1.47
TRAFD1-207ENST00000550051 SLC51BQ86UW2 128 aa5.89□□□□□ -1.47
TRAFD1-207ENST00000550051 KRTAP7-1Q8IUC3 87 aa5.89□□□□□ -1.47
TRAFD1-207ENST00000550051 PPP1R2P9O14990 202 aa5.88□□□□□ -1.47
TRAFD1-207ENST00000550051 NDUFA1O15239 70 aa5.88□□□□□ -1.47
TRAFD1-207ENST00000550051 UBE2D1P51668 147 aa5.88□□□□□ -1.47
TRAFD1-207ENST00000550051 RIGQ13278 110 aa5.88□□□□□ -1.47
TRAFD1-207ENST00000550051 C10orf25Q5T742 122 aa5.88□□□□□ -1.47
TRAFD1-207ENST00000550051 ORAOV1Q8WV07 137 aa5.88□□□□□ -1.47
TRAFD1-207ENST00000550051 FAM104AQ969W3 186 aa5.88□□□□□ -1.47
TRAFD1-207ENST00000550051 OSTCQ9NRP0 149 aa5.88□□□□□ -1.47
TRAFD1-207ENST00000550051 TRBV24-1A0A075B6N3 115 aa5.87□□□□□ -1.47
TRAFD1-207ENST00000550051 SMKR1H3BMG3 65 aa5.87□□□□□ -1.47
TRAFD1-207ENST00000550051 TCAPO15273 167 aa5.87□□□□□ -1.47
TRAFD1-207ENST00000550051 RPL32P62910 135 aaKnown RBP5.87□□□□□ -1.47
TRAFD1-207ENST00000550051 C20orf78Q9BR46 151 aa5.87□□□□□ -1.47
TRAFD1-207ENST00000550051 SMDT1Q9H4I9 107 aa5.87□□□□□ -1.47
TRAFD1-207ENST00000550051 C6orf48Q9UBA6 75 aa5.87□□□□□ -1.47
TRAFD1-207ENST00000550051 LINC00862A6NCI5 91 aa5.86□□□□□ -1.47
TRAFD1-207ENST00000550051 MRPS36P82909 103 aaKnown RBP5.86□□□□□ -1.47
TRAFD1-207ENST00000550051 KIAA0087Q14695 138 aa5.86□□□□□ -1.47
TRAFD1-207ENST00000550051 FAM19A5Q7Z5A7 132 aaPredicted RBP5.86□□□□□ -1.47
TRAFD1-207ENST00000550051 LINC01551Q86U37 167 aa5.86□□□□□ -1.47
TRAFD1-207ENST00000550051 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.85□□□□□ -1.47
TRAFD1-207ENST00000550051 ZNF861PO60384 105 aa5.85□□□□□ -1.47
TRAFD1-207ENST00000550051 UBE2BP63146 152 aa5.85□□□□□ -1.47
TRAFD1-207ENST00000550051 BLOC1S1P78537 153 aa5.85□□□□□ -1.47
TRAFD1-207ENST00000550051 MRPL51Q4U2R6 128 aaKnown RBP5.85□□□□□ -1.47
TRAFD1-207ENST00000550051 GAGE2EQ4V326 116 aa5.85□□□□□ -1.47
TRAFD1-207ENST00000550051 FAM104BQ5XKR9 115 aa5.85□□□□□ -1.47
TRAFD1-207ENST00000550051 SPANXA1Q9NS26 97 aa5.85□□□□□ -1.47
TRAFD1-207ENST00000550051 GAGE2DQ9UEU5 116 aa5.85□□□□□ -1.47
TRAFD1-207ENST00000550051 TRBV30A0A0K0K1B3 111 aa5.84□□□□□ -1.47
TRAFD1-207ENST00000550051 NDUFC2-KCTD14E9PQ53 114 aa5.84□□□□□ -1.47
TRAFD1-207ENST00000550051 M0QXV9 152 aa5.84□□□□□ -1.47
TRAFD1-207ENST00000550051 RPL39P62891 51 aaKnown RBP5.84□□□□□ -1.47
TRAFD1-207ENST00000550051 TCTE3Q8IZS6 198 aa5.84□□□□□ -1.47
TRAFD1-207ENST00000550051 SMIM7Q9BQ49 75 aa5.84□□□□□ -1.47
TRAFD1-207ENST00000550051 V9GYV3 84 aa5.84□□□□□ -1.47
TRAFD1-207ENST00000550051 HBBP68871 147 aa5.83□□□□□ -1.48
TRAFD1-207ENST00000550051 C9orf129Q5T035 196 aaKnown RBP5.83□□□□□ -1.48
TRAFD1-207ENST00000550051 KRTAP19-1Q8IUB9 90 aa5.83□□□□□ -1.48
TRAFD1-207ENST00000550051 TGIF2-C20orf24A0A0A6YYL0 155 aa5.82□□□□□ -1.48
TRAFD1-207ENST00000550051 ZNF727A8MUV8 499 aa5.82□□□□□ -1.48
TRAFD1-207ENST00000550051 TNFRSF6BO95407 300 aa5.82□□□□□ -1.48
TRAFD1-207ENST00000550051 CKS2P33552 79 aa5.82□□□□□ -1.48
TRAFD1-207ENST00000550051 CEBPGP53567 150 aa5.82□□□□□ -1.48
TRAFD1-207ENST00000550051 LINC01561Q8N1V8 128 aa5.82□□□□□ -1.48
TRAFD1-207ENST00000550051 NAT8BQ9UHF3 227 aa5.82□□□□□ -1.48
TRAFD1-207ENST00000550051 PYGO1Q9Y3Y4 419 aa5.82□□□□□ -1.48
TRAFD1-207ENST00000550051 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 A0A1B0GW15 77 aa5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 IFITM10A6NMD0 228 aa5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 NUPR1O60356 82 aa5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 TSPAN13O95857 204 aa5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 FAM74A3Q4VXF1 159 aa5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 LINC00242Q5T6M2 205 aa5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 PACRGQ96M98 296 aaPredicted RBP5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 SMIM2Q9BVW6 85 aa5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 EIF5A2Q9GZV4 153 aaKnown RBP5.81□□□□□ -1.48
TRAFD1-207ENST00000550051 SMIM27A0A1W2PRY6 76 aa5.8□□□□□ -1.48
TRAFD1-207ENST00000550051 SRP19P09132 144 aaKnown RBP5.8□□□□□ -1.48
TRAFD1-207ENST00000550051 C2orf82Q6UX34 121 aa5.8□□□□□ -1.48
TRAFD1-207ENST00000550051 C22orf24Q9Y442 160 aa5.8□□□□□ -1.48
TRAFD1-207ENST00000550051 PPBPP02775 128 aa5.79□□□□□ -1.48
TRAFD1-207ENST00000550051 LBHQ53QV2 105 aaPredicted RBP5.79□□□□□ -1.48
TRAFD1-207ENST00000550051 ALKAL2Q6UX46 152 aa5.79□□□□□ -1.48
TRAFD1-207ENST00000550051 KRTAP4-12Q9BQ66 201 aa5.79□□□□□ -1.48
TRAFD1-207ENST00000550051 A0A087X002 238 aa5.78□□□□□ -1.48
TRAFD1-207ENST00000550051 F8W036 122 aa5.78□□□□□ -1.48
TRAFD1-207ENST00000550051 CRYGAP11844 174 aa5.78□□□□□ -1.48
TRAFD1-207ENST00000550051 IFI27P40305 119 aaPredicted RBP5.78□□□□□ -1.48
TRAFD1-207ENST00000550051 TYMSOSQ8TAI1 123 aa5.78□□□□□ -1.48
TRAFD1-207ENST00000550051 CTDSP1Q9GZU7 261 aa5.78□□□□□ -1.48
TRAFD1-207ENST00000550051 IGLV4-3A0A075B6K6 122 aa5.77□□□□□ -1.49
TRAFD1-207ENST00000550051 D6R8Y8 96 aa5.77□□□□□ -1.49
TRAFD1-207ENST00000550051 NPYP01303 97 aa5.77□□□□□ -1.49
TRAFD1-207ENST00000550051 RAB5AP20339 215 aa5.77□□□□□ -1.49
TRAFD1-207ENST00000550051 RPL28P46779 137 aaKnown RBP5.77□□□□□ -1.49
TRAFD1-207ENST00000550051 RPL23P62829 140 aaKnown RBP5.77□□□□□ -1.49
TRAFD1-207ENST00000550051 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
TRAFD1-207ENST00000550051 TMEM141Q96I45 108 aa5.77□□□□□ -1.49
TRAFD1-207ENST00000550051 TP73-AS1Q9UF72 201 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms