RNA–Protein interactions for RNA: ENST00000549102.1

NR4A1-212, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-212ENST00000549102 J3QL48 77 aa9.56□□□□□ -0.88
NR4A1-212ENST00000549102 APOMO95445 188 aa9.56□□□□□ -0.88
NR4A1-212ENST00000549102 TRAV9-1A0A075B6T8 112 aa9.55□□□□□ -0.88
NR4A1-212ENST00000549102 KRTAP29-1A8MX34 341 aaPredicted RBP9.55□□□□□ -0.88
NR4A1-212ENST00000549102 LINC00474Q9P2X8 69 aa9.55□□□□□ -0.88
NR4A1-212ENST00000549102 PKHD1L1Q86WI1 4243 aa9.55□□□□□ -0.88
NR4A1-212ENST00000549102 IGLV4-3A0A075B6K6 122 aa9.54□□□□□ -0.88
NR4A1-212ENST00000549102 IGHV3OR16-9A0A0B4J2B5 98 aa9.54□□□□□ -0.88
NR4A1-212ENST00000549102 Q6ZRU5 148 aa9.54□□□□□ -0.88
NR4A1-212ENST00000549102 STPG4Q8N801 248 aa9.54□□□□□ -0.88
NR4A1-212ENST00000549102 TMEM141Q96I45 108 aa9.54□□□□□ -0.88
NR4A1-212ENST00000549102 C2orf48Q96LS8 159 aa9.54□□□□□ -0.88
NR4A1-212ENST00000549102 CAMK2N2Q96S95 79 aa9.54□□□□□ -0.88
NR4A1-212ENST00000549102 CYSLTR1Q9Y271 337 aa9.54□□□□□ -0.88
NR4A1-212ENST00000549102 K7EMI3 77 aa9.53□□□□□ -0.88
NR4A1-212ENST00000549102 S100PP25815 95 aa9.53□□□□□ -0.88
NR4A1-212ENST00000549102 HNRNPA3P51991 378 aaKnown RBP9.53□□□□□ -0.88
NR4A1-212ENST00000549102 SPAG11BQ08648 103 aa9.53□□□□□ -0.88
NR4A1-212ENST00000549102 ORMDL2Q53FV1 153 aa9.53□□□□□ -0.88
NR4A1-212ENST00000549102 C2orf66Q6UXQ4 117 aa9.53□□□□□ -0.88
NR4A1-212ENST00000549102 OR10D4PQ8NGN7 298 aa9.53□□□□□ -0.88
NR4A1-212ENST00000549102 NXT2Q9NPJ8 142 aaKnown RBP9.53□□□□□ -0.88
NR4A1-212ENST00000549102 KIAA1644Q3SXP7 199 aa9.52□□□□□ -0.89
NR4A1-212ENST00000549102 C7orf33Q8WU49 177 aa9.52□□□□□ -0.89
NR4A1-212ENST00000549102 ORAOV1Q8WV07 137 aa9.52□□□□□ -0.89
NR4A1-212ENST00000549102 TGIF2-C20orf24A0A0A6YYL0 155 aa9.51□□□□□ -0.89
NR4A1-212ENST00000549102 LOC107984640A0A0U1RRK4 108 aa9.51□□□□□ -0.89
NR4A1-212ENST00000549102 C10orf91Q5T1B1 145 aa9.51□□□□□ -0.89
NR4A1-212ENST00000549102 TEX43Q6ZNM6 134 aa9.51□□□□□ -0.89
NR4A1-212ENST00000549102 LRP1Q07954 4544 aaKnown RBP9.51□□□□□ -0.89
NR4A1-212ENST00000549102 PTTG1IPP53801 180 aa9.5□□□□□ -0.89
NR4A1-212ENST00000549102 LINC00242Q5T6M2 205 aa9.5□□□□□ -0.89
NR4A1-212ENST00000549102 Q6ZN92 141 aa9.5□□□□□ -0.89
NR4A1-212ENST00000549102 C2orf88Q9BSF0 95 aa9.5□□□□□ -0.89
NR4A1-212ENST00000549102 CARHSP1Q9Y2V2 147 aaKnown RBP9.5□□□□□ -0.89
NR4A1-212ENST00000549102 OXTP01178 125 aa9.49□□□□□ -0.89
NR4A1-212ENST00000549102 NPSP0C0P6 89 aa9.49□□□□□ -0.89
NR4A1-212ENST00000549102 GAGE2BQ13066 116 aa9.49□□□□□ -0.89
NR4A1-212ENST00000549102 RHEBQ15382 184 aa9.49□□□□□ -0.89
NR4A1-212ENST00000549102 GNB1LQ9BYB4 327 aa9.49□□□□□ -0.89
NR4A1-212ENST00000549102 FAT3Q8TDW7 4589 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 A0A087WZ39 114 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 IGIPA6NJ69 53 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 F8WDY8 70 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.48□□□□□ -0.89
NR4A1-212ENST00000549102 G0S2P27469 103 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 UBE2D1P51668 147 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 RNF151Q2KHN1 245 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 ZC2HC1BQ5TFG8 222 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 LINC00173Q6ZV60 143 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 AMELXQ99217 191 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 VCX2Q9H322 139 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 RPS10P5Q9NQ39 176 aa9.48□□□□□ -0.89
NR4A1-212ENST00000549102 A0A0J9YXV3 536 aa9.47□□□□□ -0.89
NR4A1-212ENST00000549102 NDUFA1O15239 70 aa9.47□□□□□ -0.89
NR4A1-212ENST00000549102 COX19Q49B96 90 aa9.47□□□□□ -0.89
NR4A1-212ENST00000549102 MRPL35Q9NZE8 188 aaKnown RBP9.47□□□□□ -0.89
NR4A1-212ENST00000549102 RPL18AQ02543 176 aaKnown RBP9.46□□□□□ -0.9
NR4A1-212ENST00000549102 ALKBH7Q9BT30 221 aaPredicted RBP9.46□□□□□ -0.9
NR4A1-212ENST00000549102 MT-ND6P03923 174 aa9.45□□□□□ -0.9
NR4A1-212ENST00000549102 PRR3P79522 188 aaKnown RBP9.45□□□□□ -0.9
NR4A1-212ENST00000549102 PAPPA-AS1Q5QFB9 102 aa9.45□□□□□ -0.9
NR4A1-212ENST00000549102 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
NR4A1-212ENST00000549102 TIMM17AQ99595 171 aa9.45□□□□□ -0.9
NR4A1-212ENST00000549102 C10orf25Q5T742 122 aa9.44□□□□□ -0.9
NR4A1-212ENST00000549102 UNQ6190/PRO20217Q6UXQ8 127 aa9.44□□□□□ -0.9
NR4A1-212ENST00000549102 LINC01561Q8N1V8 128 aa9.44□□□□□ -0.9
NR4A1-212ENST00000549102 MRPL18Q9H0U6 180 aaKnown RBP9.44□□□□□ -0.9
NR4A1-212ENST00000549102 FABP9Q0Z7S8 132 aa9.43□□□□□ -0.9
NR4A1-212ENST00000549102 KIAA0087Q14695 138 aa9.43□□□□□ -0.9
NR4A1-212ENST00000549102 FAM19A3Q7Z5A8 133 aa9.43□□□□□ -0.9
NR4A1-212ENST00000549102 C6orf48Q9UBA6 75 aa9.43□□□□□ -0.9
NR4A1-212ENST00000549102 A0A1W2PNN7 141 aa9.42□□□□□ -0.9
NR4A1-212ENST00000549102 LINC01546A6NGU7 62 aa9.42□□□□□ -0.9
NR4A1-212ENST00000549102 ERASQ7Z444 233 aa9.42□□□□□ -0.9
NR4A1-212ENST00000549102 SCGB3A1Q96QR1 104 aa9.42□□□□□ -0.9
NR4A1-212ENST00000549102 APOC3P02656 99 aa9.41□□□□□ -0.9
NR4A1-212ENST00000549102 SEC11AP67812 179 aa9.41□□□□□ -0.9
NR4A1-212ENST00000549102 C9orf116Q5BN46 136 aaPredicted RBP9.41□□□□□ -0.9
NR4A1-212ENST00000549102 LINC01549A6NIU2 74 aa9.4□□□□□ -0.9
NR4A1-212ENST00000549102 TLX1NBP0CAT3 122 aa9.4□□□□□ -0.9
NR4A1-212ENST00000549102 HERVK_113P63121 156 aa9.4□□□□□ -0.9
NR4A1-212ENST00000549102 C2orf82Q6UX34 121 aa9.4□□□□□ -0.9
NR4A1-212ENST00000549102 FA2HQ7L5A8 372 aa9.4□□□□□ -0.9
NR4A1-212ENST00000549102 TRBV30A0A0K0K1B3 111 aa9.39□□□□□ -0.91
NR4A1-212ENST00000549102 PRSS2P07478 247 aa9.39□□□□□ -0.91
NR4A1-212ENST00000549102 NDUFA5Q16718 116 aa9.39□□□□□ -0.91
NR4A1-212ENST00000549102 Q6ZRP5 223 aa9.39□□□□□ -0.91
NR4A1-212ENST00000549102 GEMIN7Q9H840 131 aaKnown RBP9.39□□□□□ -0.91
NR4A1-212ENST00000549102 SMCO4Q9NRQ5 59 aa9.39□□□□□ -0.91
NR4A1-212ENST00000549102 SNAPINO95295 136 aa9.38□□□□□ -0.91
NR4A1-212ENST00000549102 SVBPQ8N300 66 aa9.38□□□□□ -0.91
NR4A1-212ENST00000549102 PACRGQ96M98 296 aaPredicted RBP9.38□□□□□ -0.91
NR4A1-212ENST00000549102 TOMM7Q9P0U1 55 aa9.38□□□□□ -0.91
NR4A1-212ENST00000549102 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
NR4A1-212ENST00000549102 TRAPPC1Q9Y5R8 145 aa9.38□□□□□ -0.91
NR4A1-212ENST00000549102 GAGE2EQ4V326 116 aa9.37□□□□□ -0.91
NR4A1-212ENST00000549102 Q8IZM0 81 aa9.37□□□□□ -0.91
NR4A1-212ENST00000549102 GAGE2DQ9UEU5 116 aa9.37□□□□□ -0.91
NR4A1-212ENST00000549102 CKS1BP61024 79 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms