RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ITPR3Q14573 2671 aa9.81□□□□□ -0.84
HDAC7-228ENST00000548938 WIPF1O43516 503 aa9.81□□□□□ -0.84
HDAC7-228ENST00000548938 INSP01308 110 aa9.81□□□□□ -0.84
HDAC7-228ENST00000548938 F5H768 121 aa9.8□□□□□ -0.84
HDAC7-228ENST00000548938 COPS9Q8WXC6 57 aa9.8□□□□□ -0.84
HDAC7-228ENST00000548938 C2CD3Q4AC94 2353 aa9.8□□□□□ -0.84
HDAC7-228ENST00000548938 FSHBP01225 129 aa9.8□□□□□ -0.84
HDAC7-228ENST00000548938 NTM-AS1Q6ZSK4 140 aa9.8□□□□□ -0.84
HDAC7-228ENST00000548938 Q9HAA7 133 aa9.8□□□□□ -0.84
HDAC7-228ENST00000548938 XCL2Q9UBD3 114 aa9.79□□□□□ -0.84
HDAC7-228ENST00000548938 MYO9AB2RTY4 2548 aa9.79□□□□□ -0.84
HDAC7-228ENST00000548938 HIST2H2BDQ6DRA6 164 aa9.79□□□□□ -0.84
HDAC7-228ENST00000548938 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
HDAC7-228ENST00000548938 CSDC2Q9Y534 153 aaKnown RBP9.79□□□□□ -0.84
HDAC7-228ENST00000548938 TRGV1A0A0A0MS02 117 aa9.78□□□□□ -0.84
HDAC7-228ENST00000548938 SDIM1Q6ZPB5 146 aa9.78□□□□□ -0.84
HDAC7-228ENST00000548938 ITPR2Q14571 2701 aa9.78□□□□□ -0.84
HDAC7-228ENST00000548938 GAGE2AQ6NT46 116 aa9.77□□□□□ -0.84
HDAC7-228ENST00000548938 TMEM126AQ9H061 195 aa9.77□□□□□ -0.84
HDAC7-228ENST00000548938 SONP18583 2426 aaKnown RBP9.77□□□□□ -0.85
HDAC7-228ENST00000548938 PEMTQ9UBM1 199 aa9.77□□□□□ -0.85
HDAC7-228ENST00000548938 C9orf153Q5TBE3 101 aa9.76□□□□□ -0.85
HDAC7-228ENST00000548938 FAM222AQ5U5X8 452 aa9.76□□□□□ -0.85
HDAC7-228ENST00000548938 WFDC11Q8NEX6 87 aa9.76□□□□□ -0.85
HDAC7-228ENST00000548938 DYNLRB2Q8TF09 96 aa9.76□□□□□ -0.85
HDAC7-228ENST00000548938 CDC42SE2Q9NRR3 84 aa9.76□□□□□ -0.85
HDAC7-228ENST00000548938 UNC79Q9P2D8 2635 aa9.76□□□□□ -0.85
HDAC7-228ENST00000548938 RPL36AP83881 106 aaKnown RBP9.76□□□□□ -0.85
HDAC7-228ENST00000548938 RPL36ALQ969Q0 106 aaKnown RBP9.76□□□□□ -0.85
HDAC7-228ENST00000548938 FLNAP21333 2647 aaKnown RBP9.76□□□□□ -0.85
HDAC7-228ENST00000548938 K7EQD1 137 aa9.75□□□□□ -0.85
HDAC7-228ENST00000548938 KHDC1LQ5JSQ8 128 aa9.75□□□□□ -0.85
HDAC7-228ENST00000548938 C3orf22Q8N5N4 141 aa9.75□□□□□ -0.85
HDAC7-228ENST00000548938 LINC00337Q8N6G1 96 aa9.75□□□□□ -0.85
HDAC7-228ENST00000548938 CRPP02741 224 aa9.75□□□□□ -0.85
HDAC7-228ENST00000548938 Q6YL49 198 aa9.75□□□□□ -0.85
HDAC7-228ENST00000548938 Q6ZTI0 123 aa9.75□□□□□ -0.85
HDAC7-228ENST00000548938 PDZD2O15018 2839 aa9.74□□□□□ -0.85
HDAC7-228ENST00000548938 INAFM2P0DMQ5 153 aa9.74□□□□□ -0.85
HDAC7-228ENST00000548938 MALP21145 153 aa9.74□□□□□ -0.85
HDAC7-228ENST00000548938 C1orf158Q8N1D5 194 aa9.74□□□□□ -0.85
HDAC7-228ENST00000548938 RPL28P46779 137 aaKnown RBP9.74□□□□□ -0.85
HDAC7-228ENST00000548938 C5orf38Q86SI9 138 aa9.74□□□□□ -0.85
HDAC7-228ENST00000548938 MIR7-3HGQ8N6C7 128 aa9.74□□□□□ -0.85
HDAC7-228ENST00000548938 IL17DQ8TAD2 202 aa9.74□□□□□ -0.85
HDAC7-228ENST00000548938 NOTCH3Q9UM47 2321 aa9.73□□□□□ -0.85
HDAC7-228ENST00000548938 IGKV2-28A0A075B6P5 120 aa9.73□□□□□ -0.85
HDAC7-228ENST00000548938 IGKV2D-28P01615 120 aa9.73□□□□□ -0.85
HDAC7-228ENST00000548938 DEFB114Q30KQ6 69 aa9.73□□□□□ -0.85
HDAC7-228ENST00000548938 C9orf129Q5T035 196 aaKnown RBP9.73□□□□□ -0.85
HDAC7-228ENST00000548938 TRAV13-2A0A0B4J235 113 aa9.73□□□□□ -0.85
HDAC7-228ENST00000548938 ACANP16112 2415 aa9.73□□□□□ -0.85
HDAC7-228ENST00000548938 GCN1Q92616 2671 aaKnown RBP9.73□□□□□ -0.85
HDAC7-228ENST00000548938 A0A087WYN8 130 aa9.72□□□□□ -0.85
HDAC7-228ENST00000548938 UQCRQO14949 82 aa9.72□□□□□ -0.85
HDAC7-228ENST00000548938 ODF3L2Q3SX64 289 aa9.72□□□□□ -0.85
HDAC7-228ENST00000548938 TRBV10-1A0A0K0K1A3 114 aa9.72□□□□□ -0.85
HDAC7-228ENST00000548938 CXCL5P42830 114 aa9.72□□□□□ -0.85
HDAC7-228ENST00000548938 SND1-IT1Q9HBX3 110 aa9.72□□□□□ -0.85
HDAC7-228ENST00000548938 AKAP9Q99996 3911 aa9.71□□□□□ -0.85
HDAC7-228ENST00000548938 TOMM7Q9P0U1 55 aa9.71□□□□□ -0.85
HDAC7-228ENST00000548938 PF4P02776 101 aa9.71□□□□□ -0.86
HDAC7-228ENST00000548938 LINC00526Q96FQ7 95 aa9.71□□□□□ -0.86
HDAC7-228ENST00000548938 KLK5Q9Y337 293 aaPredicted RBP9.71□□□□□ -0.86
HDAC7-228ENST00000548938 UBE2L6O14933 153 aa9.7□□□□□ -0.86
HDAC7-228ENST00000548938 SMIM11BQ8TCY0 68 aa9.7□□□□□ -0.86
HDAC7-228ENST00000548938 COX7B2Q8TF08 81 aa9.7□□□□□ -0.86
HDAC7-228ENST00000548938 HECTD1Q9ULT8 2610 aa9.7□□□□□ -0.86
HDAC7-228ENST00000548938 IGKV3OR2-268A0A0C4DH90 116 aa9.7□□□□□ -0.86
HDAC7-228ENST00000548938 ATP5G1P05496 136 aa9.7□□□□□ -0.86
HDAC7-228ENST00000548938 STHQ8IWL8 128 aa9.7□□□□□ -0.86
HDAC7-228ENST00000548938 TMEM243Q9BU79 118 aa9.7□□□□□ -0.86
HDAC7-228ENST00000548938 NIPBLQ6KC79 2804 aaeCLIP9.69□□□□□ -0.86
HDAC7-228ENST00000548938 SMIM9A6NGZ8 99 aa9.69□□□□□ -0.86
HDAC7-228ENST00000548938 DNAL4O96015 105 aa9.69□□□□□ -0.86
HDAC7-228ENST00000548938 C4orf3Q8WVX3 66 aa9.69□□□□□ -0.86
HDAC7-228ENST00000548938 C14orf132Q9NPU4 83 aa9.69□□□□□ -0.86
HDAC7-228ENST00000548938 FASNP49327 2511 aaKnown RBP9.69□□□□□ -0.86
HDAC7-228ENST00000548938 LOC100131303A0A0U1RQF7 123 aa9.69□□□□□ -0.86
HDAC7-228ENST00000548938 LINC00158P58513 81 aa9.68□□□□□ -0.86
HDAC7-228ENST00000548938 WNK1Q9H4A3 2382 aa9.68□□□□□ -0.86
HDAC7-228ENST00000548938 COX7CP15954 63 aa9.68□□□□□ -0.86
HDAC7-228ENST00000548938 C2orf48Q96LS8 159 aa9.68□□□□□ -0.86
HDAC7-228ENST00000548938 NOP10Q9NPE3 64 aaKnown RBP9.68□□□□□ -0.86
HDAC7-228ENST00000548938 JMJD1CQ15652 2540 aa9.67□□□□□ -0.86
HDAC7-228ENST00000548938 CCL18P55774 89 aa9.67□□□□□ -0.86
HDAC7-228ENST00000548938 HIST1H4AP62805 103 aaKnown RBP9.67□□□□□ -0.86
HDAC7-228ENST00000548938 NOTCH2Q04721 2471 aa9.67□□□□□ -0.86
HDAC7-228ENST00000548938 SETD2Q9BYW2 2564 aaPredicted RBP9.66□□□□□ -0.86
HDAC7-228ENST00000548938 IGKV3D-7A0A0C4DH55 119 aa9.66□□□□□ -0.86
HDAC7-228ENST00000548938 OVOL2Q9BRP0 275 aa9.66□□□□□ -0.86
HDAC7-228ENST00000548938 NF1P21359 2839 aa9.65□□□□□ -0.86
HDAC7-228ENST00000548938 MTORP42345 2549 aa9.65□□□□□ -0.86
HDAC7-228ENST00000548938 SETXQ7Z333 2677 aaKnown RBP9.65□□□□□ -0.86
HDAC7-228ENST00000548938 LECT2O14960 151 aa9.65□□□□□ -0.86
HDAC7-228ENST00000548938 LINC00846Q9NV44 126 aa9.65□□□□□ -0.86
HDAC7-228ENST00000548938 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
HDAC7-228ENST00000548938 LOC107984640A0A0U1RRK4 108 aa9.64□□□□□ -0.87
HDAC7-228ENST00000548938 PFN2P35080 140 aa9.64□□□□□ -0.87
HDAC7-228ENST00000548938 KRTAP1-1Q07627 177 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms