RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 POLR2KP53803 58 aaKnown RBP8.7□□□□□ -1.02
CDX2-202ENST00000548877 UFSP1Q6NVU6 142 aa8.7□□□□□ -1.02
CDX2-202ENST00000548877 KLK12Q9UKR0 248 aa8.7□□□□□ -1.02
CDX2-202ENST00000548877 TRBV27A0A0K0K1C4 114 aa8.69□□□□□ -1.02
CDX2-202ENST00000548877 HSBP1L1C9JCN9 74 aa8.69□□□□□ -1.02
CDX2-202ENST00000548877 LINC01545Q5VT33 79 aa8.69□□□□□ -1.02
CDX2-202ENST00000548877 DGAT2L7PQ6IED9 249 aa8.69□□□□□ -1.02
CDX2-202ENST00000548877 C9orf163Q8N9P6 203 aa8.69□□□□□ -1.02
CDX2-202ENST00000548877 UBE2WQ96B02 151 aa8.69□□□□□ -1.02
CDX2-202ENST00000548877 SDHAF1A6NFY7 115 aa8.68□□□□□ -1.02
CDX2-202ENST00000548877 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.67□□□□□ -1.02
CDX2-202ENST00000548877 I3L3M4 83 aa8.67□□□□□ -1.02
CDX2-202ENST00000548877 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
CDX2-202ENST00000548877 ZNF664Q8N3J9 261 aa8.67□□□□□ -1.02
CDX2-202ENST00000548877 TOMM6Q96B49 74 aa8.67□□□□□ -1.02
CDX2-202ENST00000548877 CYSLTR1Q9Y271 337 aa8.67□□□□□ -1.02
CDX2-202ENST00000548877 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.67□□□□□ -1.02
CDX2-202ENST00000548877 A0A087WX48 190 aa8.66□□□□□ -1.02
CDX2-202ENST00000548877 TRBV10-1A0A0K0K1A3 114 aa8.66□□□□□ -1.02
CDX2-202ENST00000548877 CIRBPQ14011 172 aaKnown RBP8.66□□□□□ -1.02
CDX2-202ENST00000548877 C1orf43Q9BWL3 253 aa8.66□□□□□ -1.02
CDX2-202ENST00000548877 PRSS1P07477 247 aa8.65□□□□□ -1.02
CDX2-202ENST00000548877 ENHOQ6UWT2 76 aa8.65□□□□□ -1.02
CDX2-202ENST00000548877 Q6ZN92 141 aa8.65□□□□□ -1.02
CDX2-202ENST00000548877 SDIM1Q6ZPB5 146 aa8.65□□□□□ -1.02
CDX2-202ENST00000548877 SCGB3A1Q96QR1 104 aa8.65□□□□□ -1.02
CDX2-202ENST00000548877 PAM16Q9Y3D7 125 aa8.65□□□□□ -1.02
CDX2-202ENST00000548877 USP17L23D6RBM5 183 aa8.64□□□□□ -1.03
CDX2-202ENST00000548877 H0Y8G0 127 aa8.64□□□□□ -1.03
CDX2-202ENST00000548877 PANO1I0J062 215 aa8.64□□□□□ -1.03
CDX2-202ENST00000548877 DDTP30046 118 aa8.64□□□□□ -1.03
CDX2-202ENST00000548877 SPATA45Q537H7 98 aa8.64□□□□□ -1.03
CDX2-202ENST00000548877 C2orf66Q6UXQ4 117 aa8.64□□□□□ -1.03
CDX2-202ENST00000548877 ERASQ7Z444 233 aa8.64□□□□□ -1.03
CDX2-202ENST00000548877 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
CDX2-202ENST00000548877 TRAV12-1A0A0B4J245 112 aa8.63□□□□□ -1.03
CDX2-202ENST00000548877 PAPPA-AS1Q5QFB9 102 aa8.63□□□□□ -1.03
CDX2-202ENST00000548877 PRO1933Q9H354 126 aa8.63□□□□□ -1.03
CDX2-202ENST00000548877 NPSP0C0P6 89 aa8.62□□□□□ -1.03
CDX2-202ENST00000548877 RPL36AP83881 106 aaKnown RBP8.62□□□□□ -1.03
CDX2-202ENST00000548877 RPL36ALQ969Q0 106 aaKnown RBP8.62□□□□□ -1.03
CDX2-202ENST00000548877 TIMM17AQ99595 171 aa8.62□□□□□ -1.03
CDX2-202ENST00000548877 MIEN1Q9BRT3 115 aa8.62□□□□□ -1.03
CDX2-202ENST00000548877 PLNP26678 52 aa8.61□□□□□ -1.03
CDX2-202ENST00000548877 SMAGPQ0VAQ4 97 aa8.61□□□□□ -1.03
CDX2-202ENST00000548877 COTL1Q14019 142 aa8.61□□□□□ -1.03
CDX2-202ENST00000548877 NEXN-AS1Q8NBZ9 246 aa8.61□□□□□ -1.03
CDX2-202ENST00000548877 LINC01600Q96MT4 127 aa8.61□□□□□ -1.03
CDX2-202ENST00000548877 UQCR10Q9UDW1 63 aa8.61□□□□□ -1.03
CDX2-202ENST00000548877 TRBV7-3A0A075B6L6 115 aa8.6□□□□□ -1.03
CDX2-202ENST00000548877 DPM2O94777 84 aa8.6□□□□□ -1.03
CDX2-202ENST00000548877 TSHBP01222 138 aa8.6□□□□□ -1.03
CDX2-202ENST00000548877 UBE2D3P61077 147 aa8.6□□□□□ -1.03
CDX2-202ENST00000548877 UBE2D2P62837 147 aa8.6□□□□□ -1.03
CDX2-202ENST00000548877 ODF1Q14990 250 aa8.6□□□□□ -1.03
CDX2-202ENST00000548877 MIAQ16674 131 aa8.6□□□□□ -1.03
CDX2-202ENST00000548877 KRTAP26-1Q6PEX3 210 aa8.6□□□□□ -1.03
CDX2-202ENST00000548877 ATOH7Q8N100 152 aa8.6□□□□□ -1.03
CDX2-202ENST00000548877 CRPP02741 224 aa8.59□□□□□ -1.03
CDX2-202ENST00000548877 CNBPP62633 177 aaKnown RBP8.59□□□□□ -1.03
CDX2-202ENST00000548877 MRPL52Q86TS9 123 aaKnown RBP8.59□□□□□ -1.03
CDX2-202ENST00000548877 C20orf203Q8NBC4 194 aa8.59□□□□□ -1.03
CDX2-202ENST00000548877 PMCHL2Q9BQD1 86 aa8.59□□□□□ -1.03
CDX2-202ENST00000548877 PRR34Q9NV39 138 aa8.59□□□□□ -1.03
CDX2-202ENST00000548877 TRBV6-8A0A0A6YYG3 113 aa8.58□□□□□ -1.04
CDX2-202ENST00000548877 IGKCP01834 107 aa8.58□□□□□ -1.04
CDX2-202ENST00000548877 IGLC3P0DOY3 106 aa8.58□□□□□ -1.04
CDX2-202ENST00000548877 PYGO1Q9Y3Y4 419 aa8.58□□□□□ -1.04
CDX2-202ENST00000548877 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
CDX2-202ENST00000548877 LINC00587B1AMM8 73 aa8.57□□□□□ -1.04
CDX2-202ENST00000548877 TMEM262E9PQX1 116 aa8.57□□□□□ -1.04
CDX2-202ENST00000548877 F8VRH5 84 aa8.57□□□□□ -1.04
CDX2-202ENST00000548877 PMVKQ15126 192 aa8.57□□□□□ -1.04
CDX2-202ENST00000548877 MPV17L2Q567V2 206 aa8.57□□□□□ -1.04
CDX2-202ENST00000548877 TMEM97Q5BJF2 176 aa8.57□□□□□ -1.04
CDX2-202ENST00000548877 SPANXA1Q9NS26 97 aa8.57□□□□□ -1.04
CDX2-202ENST00000548877 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
CDX2-202ENST00000548877 ANGP03950 147 aaKnown RBP8.56□□□□□ -1.04
CDX2-202ENST00000548877 A0A087WYN8 130 aa8.55□□□□□ -1.04
CDX2-202ENST00000548877 KRTAP10-8P60410 259 aa8.55□□□□□ -1.04
CDX2-202ENST00000548877 SLC25A34Q6PIV7 304 aa8.55□□□□□ -1.04
CDX2-202ENST00000548877 SPACA4Q8TDM5 124 aa8.55□□□□□ -1.04
CDX2-202ENST00000548877 TIMM21Q9BVV7 248 aa8.55□□□□□ -1.04
CDX2-202ENST00000548877 PLAC8Q9NZF1 115 aa8.55□□□□□ -1.04
CDX2-202ENST00000548877 A0A0J9YXV3 536 aa8.54□□□□□ -1.04
CDX2-202ENST00000548877 hDV102S1A0JD36 115 aa8.54□□□□□ -1.04
CDX2-202ENST00000548877 RPL39P62891 51 aaKnown RBP8.54□□□□□ -1.04
CDX2-202ENST00000548877 LBHQ53QV2 105 aaPredicted RBP8.54□□□□□ -1.04
CDX2-202ENST00000548877 MRPL35Q9NZE8 188 aaKnown RBP8.54□□□□□ -1.04
CDX2-202ENST00000548877 H7C423 109 aa8.53□□□□□ -1.04
CDX2-202ENST00000548877 COX8AP10176 69 aa8.53□□□□□ -1.04
CDX2-202ENST00000548877 MAJINQ3KP22 176 aa8.53□□□□□ -1.04
CDX2-202ENST00000548877 VCX2Q9H322 139 aa8.53□□□□□ -1.04
CDX2-202ENST00000548877 CST9LQ9H4G1 147 aa8.53□□□□□ -1.04
CDX2-202ENST00000548877 IGHV3-64A0A075B6Q5 118 aa8.52□□□□□ -1.05
CDX2-202ENST00000548877 DLEU1O43261 78 aa8.52□□□□□ -1.05
CDX2-202ENST00000548877 HERVK_113P61574 105 aa8.52□□□□□ -1.05
CDX2-202ENST00000548877 SLPIP03973 132 aa8.51□□□□□ -1.05
CDX2-202ENST00000548877 MRPS36P82909 103 aaKnown RBP8.51□□□□□ -1.05
CDX2-202ENST00000548877 C14orf144Q96I85 54 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms