RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 ZNF720Q7Z2F6 126 aa-0.05□□□□□ -2.42
CCDC38-206ENST00000548771 TMED4Q7Z7H5 227 aa-0.05□□□□□ -2.42
CCDC38-206ENST00000548771 DEFB106AQ8N104 65 aa-0.05□□□□□ -2.42
CCDC38-206ENST00000548771 GAFA1Q96PS6 74 aa-0.05□□□□□ -2.42
CCDC38-206ENST00000548771 OR4C12Q96R67 309 aa-0.05□□□□□ -2.42
CCDC38-206ENST00000548771 PBDC1Q9BVG4 233 aa-0.05□□□□□ -2.42
CCDC38-206ENST00000548771 NAT8BQ9UHF3 227 aa-0.05□□□□□ -2.42
CCDC38-206ENST00000548771 SSR3Q9UNL2 185 aa-0.05□□□□□ -2.42
CCDC38-206ENST00000548771 ASB4Q9Y574 426 aa-0.05□□□□□ -2.42
CCDC38-206ENST00000548771 PRORSD1PA6NEY8 169 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 FAM24AA6NFZ4 105 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 M0R1W7 72 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 ATP5HO75947 161 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 ATG12O94817 140 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 SCTP09683 121 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 SPART-AS1P0CW21 52 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 DEFB130BP0DP73 79 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 DEFB130AP0DP74 79 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 CBLN1P23435 193 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 PPP1R2P41236 205 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 CCL18P55774 89 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 HBBP68871 147 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 FADDQ13158 208 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 TMED2Q15363 201 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 NEDD8Q15843 81 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 SPINK13Q1W4C9 94 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 LINC01556Q5JQF7 62 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 OR2T2Q6IF00 324 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 PHF5AQ7RTV0 110 aaKnown RBP-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 MORN4Q8NDC4 146 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 OR4B1Q8NGF8 309 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 GRPEL2Q8TAA5 225 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 LEAP2Q969E1 77 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 MALSU1Q96EH3 234 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 KAAG1Q9UBP8 84 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 NDUFAF1Q9Y375 327 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 TPRKBQ9Y3C4 175 aa-0.06□□□□□ -2.42
CCDC38-206ENST00000548771 LOC285095A0A1B0GVY8 99 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 C20orf202A1L168 122 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 I3L2K1 104 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 MFSD11O43934 449 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 PITX3O75364 302 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 MRPL33O75394 65 aaKnown RBP-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 IGHV3-30P01768 117 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 IGHV3-30-5P0DP03 117 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 PIPP12273 146 aaPredicted RBP-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 UBE2D1P51668 147 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 TPPP2P59282 170 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 DEFB131AP59861 70 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 RPS29P62273 56 aaKnown RBP-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 COX6A2Q02221 97 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 OR8B8Q15620 311 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 MINOS1Q5TGZ0 78 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 C1orf140Q5VVS0 124 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 SCIMPQ6UWF3 145 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 ENHOQ6UWT2 76 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 C3orf62Q6ZUJ4 267 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 RPS27LQ71UM5 84 aaKnown RBP-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 DYNLRB2Q8TF09 96 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 DIRC1Q969H9 104 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 EFCAB11Q9BUY7 163 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 TTTY10Q9BZA0 68 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 SLC35B3Q9H1N7 401 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 LYRM2Q9NU23 88 aaPredicted RBP-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 TMEM14BQ9NUH8 114 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 NUBP2Q9Y5Y2 271 aa-0.07□□□□□ -2.42
CCDC38-206ENST00000548771 UQCRHLA0A096LP55 91 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 LOC107986453A0A1B0GWG9 222 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 IQCF6A8MYZ5 107 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 H3BNG1 76 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 M0QZK8 103 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 MT-ND6P03923 174 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 PAEPP09466 180 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 EVI2AP22794 236 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 RPS3P23396 243 aaKnown RBP eCLIP-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 HSD11B1P28845 292 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 CMPK1P30085 196 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 RPL22P35268 128 aaKnown RBP-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 RPL35P42766 123 aaKnown RBP-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 CRYBA4P53673 196 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 C9orf116Q5BN46 136 aaPredicted RBP-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 NCBP2-AS2Q69YL0 99 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 XAF1Q6GPH4 301 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 CROCCP2Q86T23 111 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 TCTEX1D1Q8N7M0 179 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 OR9Q1Q8NGQ5 310 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 NEK7Q8TDX7 302 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 CCDC115Q96NT0 180 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 SNRNP25Q9BV90 132 aaKnown RBP-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 LINC00470Q9BZP3 86 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 LPAR5Q9H1C0 372 aa-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 NOP10Q9NPE3 64 aaKnown RBP-0.08□□□□□ -2.42
CCDC38-206ENST00000548771 TRAV12-2A0A075B6T6 113 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 LOC107984156A0A0G2JMH3 177 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 LINC00959A0A1B0GUT2 108 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 TMEM189A5PLL7 270 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 A8MTW9 85 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 M0R2Z0 102 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 NDUFA2O43678 99 aa-0.09□□□□□ -2.42
CCDC38-206ENST00000548771 CST7O76096 145 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms