RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 SMIM2Q9BVW6 85 aa10.6□□□□□ -0.71
SSH1-208ENST00000548522 ST20Q9HBF5 79 aa10.6□□□□□ -0.71
SSH1-208ENST00000548522 TRBV6-5A0A0K0K1A5 114 aa10.59□□□□□ -0.71
SSH1-208ENST00000548522 TMEM262E9PQX1 116 aa10.59□□□□□ -0.71
SSH1-208ENST00000548522 PRSS1P07477 247 aa10.59□□□□□ -0.71
SSH1-208ENST00000548522 SUMO2P61956 95 aaKnown RBP10.59□□□□□ -0.71
SSH1-208ENST00000548522 C14orf177Q52M58 125 aa10.59□□□□□ -0.71
SSH1-208ENST00000548522 SPATA45Q537H7 98 aa10.59□□□□□ -0.71
SSH1-208ENST00000548522 ORMDL2Q53FV1 153 aa10.59□□□□□ -0.71
SSH1-208ENST00000548522 TRBV7-3A0A075B6L6 115 aa10.58□□□□□ -0.72
SSH1-208ENST00000548522 TRBV6-8A0A0A6YYG3 113 aa10.58□□□□□ -0.72
SSH1-208ENST00000548522 TRBV10-1A0A0K0K1A3 114 aa10.58□□□□□ -0.72
SSH1-208ENST00000548522 ATP5LO75964 103 aa10.58□□□□□ -0.72
SSH1-208ENST00000548522 CRPP02741 224 aa10.58□□□□□ -0.72
SSH1-208ENST00000548522 RPL36AP83881 106 aaKnown RBP10.58□□□□□ -0.72
SSH1-208ENST00000548522 RPL36ALQ969Q0 106 aaKnown RBP10.58□□□□□ -0.72
SSH1-208ENST00000548522 C14orf144Q96I85 54 aa10.58□□□□□ -0.72
SSH1-208ENST00000548522 UQCR10Q9UDW1 63 aa10.58□□□□□ -0.72
SSH1-208ENST00000548522 PAM16Q9Y3D7 125 aa10.58□□□□□ -0.72
SSH1-208ENST00000548522 CLPSL2Q6UWE3 100 aa10.57□□□□□ -0.72
SSH1-208ENST00000548522 LINC00173Q6ZV60 143 aa10.57□□□□□ -0.72
SSH1-208ENST00000548522 IFI27L1Q96BM0 104 aa10.57□□□□□ -0.72
SSH1-208ENST00000548522 HSBP1L1C9JCN9 74 aa10.56□□□□□ -0.72
SSH1-208ENST00000548522 TCAPO15273 167 aa10.56□□□□□ -0.72
SSH1-208ENST00000548522 ANGP03950 147 aaKnown RBP10.56□□□□□ -0.72
SSH1-208ENST00000548522 IGLC3P0DOY3 106 aa10.56□□□□□ -0.72
SSH1-208ENST00000548522 NEXN-AS1Q8NBZ9 246 aa10.56□□□□□ -0.72
SSH1-208ENST00000548522 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
SSH1-208ENST00000548522 KRTAP26-1Q6PEX3 210 aa10.54□□□□□ -0.72
SSH1-208ENST00000548522 C9orf163Q8N9P6 203 aa10.54□□□□□ -0.72
SSH1-208ENST00000548522 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
SSH1-208ENST00000548522 TRAV26-2A0A0B4J265 109 aa10.53□□□□□ -0.72
SSH1-208ENST00000548522 MGPP08493 103 aa10.53□□□□□ -0.72
SSH1-208ENST00000548522 POLR2KP53803 58 aaKnown RBP10.53□□□□□ -0.72
SSH1-208ENST00000548522 ZNF56Q15929 161 aa10.53□□□□□ -0.72
SSH1-208ENST00000548522 NTM-AS1Q6ZSK4 140 aa10.53□□□□□ -0.72
SSH1-208ENST00000548522 H7C1H1 209 aa10.52□□□□□ -0.73
SSH1-208ENST00000548522 MIAQ16674 131 aa10.52□□□□□ -0.73
SSH1-208ENST00000548522 SUMO4Q6EEV6 95 aa10.52□□□□□ -0.73
SSH1-208ENST00000548522 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.73
SSH1-208ENST00000548522 PMCHL2Q9BQD1 86 aa10.52□□□□□ -0.73
SSH1-208ENST00000548522 C2orf88Q9BSF0 95 aa10.52□□□□□ -0.73
SSH1-208ENST00000548522 TRAV12-1A0A0B4J245 112 aa10.51□□□□□ -0.73
SSH1-208ENST00000548522 TRBV27A0A0K0K1C4 114 aa10.51□□□□□ -0.73
SSH1-208ENST00000548522 VCYO14598 125 aa10.51□□□□□ -0.73
SSH1-208ENST00000548522 DGAT2L7PQ6IED9 249 aa10.51□□□□□ -0.73
SSH1-208ENST00000548522 TOMM6Q96B49 74 aa10.51□□□□□ -0.73
SSH1-208ENST00000548522 PRR34Q9NV39 138 aa10.51□□□□□ -0.73
SSH1-208ENST00000548522 M0QY20 66 aa10.5□□□□□ -0.73
SSH1-208ENST00000548522 M0R143 59 aa10.5□□□□□ -0.73
SSH1-208ENST00000548522 RBX1P62877 108 aa10.5□□□□□ -0.73
SSH1-208ENST00000548522 GAGE6Q13070 117 aa10.5□□□□□ -0.73
SSH1-208ENST00000548522 LINC00269Q8N2A0 174 aa10.5□□□□□ -0.73
SSH1-208ENST00000548522 IGLV10-54A0A075B6I4 117 aa10.49□□□□□ -0.73
SSH1-208ENST00000548522 CHTF8P0CG12 524 aa10.49□□□□□ -0.73
SSH1-208ENST00000548522 RPL39LQ96EH5 51 aaKnown RBP10.49□□□□□ -0.73
SSH1-208ENST00000548522 KIR2DL4Q99706 377 aa10.49□□□□□ -0.73
SSH1-208ENST00000548522 ODF1Q14990 250 aa10.48□□□□□ -0.73
SSH1-208ENST00000548522 ATOH7Q8N100 152 aa10.48□□□□□ -0.73
SSH1-208ENST00000548522 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.47□□□□□ -0.73
SSH1-208ENST00000548522 CIRBPQ14011 172 aaKnown RBP10.47□□□□□ -0.73
SSH1-208ENST00000548522 Q6ZRU5 148 aa10.47□□□□□ -0.73
SSH1-208ENST00000548522 SDHAF1A6NFY7 115 aa10.46□□□□□ -0.73
SSH1-208ENST00000548522 DLEU1O43261 78 aa10.46□□□□□ -0.73
SSH1-208ENST00000548522 SLPIP03973 132 aa10.46□□□□□ -0.73
SSH1-208ENST00000548522 SLC25A34Q6PIV7 304 aa10.46□□□□□ -0.73
SSH1-208ENST00000548522 Q6ZN92 141 aa10.46□□□□□ -0.73
SSH1-208ENST00000548522 ERASQ7Z444 233 aa10.46□□□□□ -0.73
SSH1-208ENST00000548522 CYSLTR1Q9Y271 337 aa10.46□□□□□ -0.73
SSH1-208ENST00000548522 F5H697 171 aa10.45□□□□□ -0.74
SSH1-208ENST00000548522 NPSP0C0P6 89 aa10.45□□□□□ -0.74
SSH1-208ENST00000548522 COX8AP10176 69 aa10.45□□□□□ -0.74
SSH1-208ENST00000548522 PLNP26678 52 aa10.45□□□□□ -0.74
SSH1-208ENST00000548522 CNBPP62633 177 aaKnown RBP10.45□□□□□ -0.74
SSH1-208ENST00000548522 MAJINQ3KP22 176 aa10.45□□□□□ -0.74
SSH1-208ENST00000548522 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
SSH1-208ENST00000548522 TMEM141Q96I45 108 aa10.45□□□□□ -0.74
SSH1-208ENST00000548522 TIMM17AQ99595 171 aa10.45□□□□□ -0.74
SSH1-208ENST00000548522 hDV102S1A0JD36 115 aa10.44□□□□□ -0.74
SSH1-208ENST00000548522 DPM2O94777 84 aa10.44□□□□□ -0.74
SSH1-208ENST00000548522 SNHG12Q9BXW3 62 aa10.44□□□□□ -0.74
SSH1-208ENST00000548522 TRBV25-1A0A075B6N4 114 aa10.43□□□□□ -0.74
SSH1-208ENST00000548522 A0A087WYN8 130 aa10.43□□□□□ -0.74
SSH1-208ENST00000548522 H0Y8G0 127 aa10.43□□□□□ -0.74
SSH1-208ENST00000548522 IGKCP01834 107 aa10.43□□□□□ -0.74
SSH1-208ENST00000548522 REG3AQ06141 175 aa10.43□□□□□ -0.74
SSH1-208ENST00000548522 C20orf203Q8NBC4 194 aa10.43□□□□□ -0.74
SSH1-208ENST00000548522 SPACA4Q8TDM5 124 aa10.43□□□□□ -0.74
SSH1-208ENST00000548522 SCGB3A1Q96QR1 104 aa10.43□□□□□ -0.74
SSH1-208ENST00000548522 F8VRH5 84 aa10.42□□□□□ -0.74
SSH1-208ENST00000548522 I3L3M4 83 aa10.42□□□□□ -0.74
SSH1-208ENST00000548522 PAPPA-AS1Q5QFB9 102 aa10.42□□□□□ -0.74
SSH1-208ENST00000548522 IGLV4-60A0A075B6I1 120 aa10.41□□□□□ -0.74
SSH1-208ENST00000548522 IGHV3-64A0A075B6Q5 118 aa10.4□□□□□ -0.74
SSH1-208ENST00000548522 IGIPA6NJ69 53 aa10.4□□□□□ -0.74
SSH1-208ENST00000548522 TMEM97Q5BJF2 176 aa10.4□□□□□ -0.74
SSH1-208ENST00000548522 BOD1L2Q8IYS8 172 aa10.4□□□□□ -0.74
SSH1-208ENST00000548522 DPH3Q96FX2 82 aa10.39□□□□□ -0.75
SSH1-208ENST00000548522 TSHBP01222 138 aa10.38□□□□□ -0.75
SSH1-208ENST00000548522 FGF6P10767 208 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms