RNA–Protein interactions for RNA: ENST00000546961.1

SCN8A-204, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 465 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-204ENST00000546961 FAM74A3Q4VXF1 159 aa12.21□□□□□ -0.45
SCN8A-204ENST00000546961 C10orf25Q5T742 122 aa12.21□□□□□ -0.45
SCN8A-204ENST00000546961 FAM104AQ969W3 186 aa12.21□□□□□ -0.45
SCN8A-204ENST00000546961 IGHV3OR16-9A0A0B4J2B5 98 aa12.2□□□□□ -0.46
SCN8A-204ENST00000546961 F8WDY8 70 aa12.2□□□□□ -0.46
SCN8A-204ENST00000546961 NDUFA1O15239 70 aa12.2□□□□□ -0.46
SCN8A-204ENST00000546961 TNFRSF6BO95407 300 aa12.2□□□□□ -0.46
SCN8A-204ENST00000546961 RPL23P62829 140 aaKnown RBP12.2□□□□□ -0.46
SCN8A-204ENST00000546961 UNQ6190/PRO20217Q6UXQ8 127 aa12.2□□□□□ -0.46
SCN8A-204ENST00000546961 KRTAP11-1Q8IUC1 163 aa12.2□□□□□ -0.46
SCN8A-204ENST00000546961 TCAPO15273 167 aa12.19□□□□□ -0.46
SCN8A-204ENST00000546961 RPL32P62910 135 aaKnown RBP12.19□□□□□ -0.46
SCN8A-204ENST00000546961 ADIRFQ15847 76 aa12.19□□□□□ -0.46
SCN8A-204ENST00000546961 GAGE2EQ4V326 116 aa12.19□□□□□ -0.46
SCN8A-204ENST00000546961 SPANXA1Q9NS26 97 aa12.19□□□□□ -0.46
SCN8A-204ENST00000546961 GAGE2DQ9UEU5 116 aa12.19□□□□□ -0.46
SCN8A-204ENST00000546961 hCG_2014768A0A024R1R8 64 aa12.18□□□□□ -0.46
SCN8A-204ENST00000546961 SMIM27A0A1W2PRY6 76 aa12.18□□□□□ -0.46
SCN8A-204ENST00000546961 FAM19A5Q7Z5A7 132 aaPredicted RBP12.17□□□□□ -0.46
SCN8A-204ENST00000546961 SMIM2Q9BVW6 85 aa12.17□□□□□ -0.46
SCN8A-204ENST00000546961 C6orf48Q9UBA6 75 aa12.17□□□□□ -0.46
SCN8A-204ENST00000546961 LPAP08519 4548 aa12.17□□□□□ -0.46
SCN8A-204ENST00000546961 A0A1B0GW15 77 aa12.16□□□□□ -0.46
SCN8A-204ENST00000546961 IFITM10A6NMD0 228 aa12.16□□□□□ -0.46
SCN8A-204ENST00000546961 D6R8Y8 96 aa12.16□□□□□ -0.46
SCN8A-204ENST00000546961 HBBP68871 147 aa12.16□□□□□ -0.46
SCN8A-204ENST00000546961 MRPS36P82909 103 aaKnown RBP12.16□□□□□ -0.46
SCN8A-204ENST00000546961 H0Y9J4 135 aa12.15□□□□□ -0.46
SCN8A-204ENST00000546961 TLX1NBP0CAT3 122 aa12.15□□□□□ -0.46
SCN8A-204ENST00000546961 NAT8Q9UHE5 227 aa12.15□□□□□ -0.46
SCN8A-204ENST00000546961 TGIF2-C20orf24A0A0A6YYL0 155 aa12.13□□□□□ -0.47
SCN8A-204ENST00000546961 C9JQL5 133 aa12.13□□□□□ -0.47
SCN8A-204ENST00000546961 NPYP01303 97 aa12.13□□□□□ -0.47
SCN8A-204ENST00000546961 MRPL54Q6P161 138 aaKnown RBP12.13□□□□□ -0.47
SCN8A-204ENST00000546961 F8W036 122 aa12.12□□□□□ -0.47
SCN8A-204ENST00000546961 S100A8P05109 93 aa12.12□□□□□ -0.47
SCN8A-204ENST00000546961 KRTAP7-1Q8IUC3 87 aa12.12□□□□□ -0.47
SCN8A-204ENST00000546961 SMDT1Q9H4I9 107 aa12.12□□□□□ -0.47
SCN8A-204ENST00000546961 RAB5AP20339 215 aa12.11□□□□□ -0.47
SCN8A-204ENST00000546961 UBE2BP63146 152 aa12.11□□□□□ -0.47
SCN8A-204ENST00000546961 KIAA0087Q14695 138 aa12.11□□□□□ -0.47
SCN8A-204ENST00000546961 IGLV1-50A0A075B6I6 118 aa12.1□□□□□ -0.47
SCN8A-204ENST00000546961 M0QXV9 152 aa12.09□□□□□ -0.47
SCN8A-204ENST00000546961 PPBPP02775 128 aa12.09□□□□□ -0.47
SCN8A-204ENST00000546961 IFI27P40305 119 aaPredicted RBP12.09□□□□□ -0.47
SCN8A-204ENST00000546961 LINC00242Q5T6M2 205 aa12.09□□□□□ -0.47
SCN8A-204ENST00000546961 C2orf82Q6UX34 121 aa12.09□□□□□ -0.47
SCN8A-204ENST00000546961 SRSF3P84103 164 aaKnown RBP12.08□□□□□ -0.48
SCN8A-204ENST00000546961 TMEM136Q6ZRR5 245 aa12.08□□□□□ -0.48
SCN8A-204ENST00000546961 A0A1B0GXF2 115 aa12.07□□□□□ -0.48
SCN8A-204ENST00000546961 KRTAP1-4P0C5Y4 121 aa12.07□□□□□ -0.48
SCN8A-204ENST00000546961 PEA15Q15121 130 aa12.07□□□□□ -0.48
SCN8A-204ENST00000546961 TRBV30A0A0K0K1B3 111 aa12.06□□□□□ -0.48
SCN8A-204ENST00000546961 UBE2D1P51668 147 aa12.06□□□□□ -0.48
SCN8A-204ENST00000546961 ORMDL3Q8N138 153 aa12.06□□□□□ -0.48
SCN8A-204ENST00000546961 PACRGQ96M98 296 aaPredicted RBP12.06□□□□□ -0.48
SCN8A-204ENST00000546961 PYGO1Q9Y3Y4 419 aa12.06□□□□□ -0.48
SCN8A-204ENST00000546961 IGLV4-3A0A075B6K6 122 aa12.05□□□□□ -0.48
SCN8A-204ENST00000546961 NDUFC2-KCTD14E9PQ53 114 aa12.05□□□□□ -0.48
SCN8A-204ENST00000546961 C9orf129Q5T035 196 aaKnown RBP12.05□□□□□ -0.48
SCN8A-204ENST00000546961 TMEM141Q96I45 108 aa12.05□□□□□ -0.48
SCN8A-204ENST00000546961 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
SCN8A-204ENST00000546961 PRR4Q16378 134 aa12.04□□□□□ -0.48
SCN8A-204ENST00000546961 LOC389332A0A1B0GUA5 103 aa12.03□□□□□ -0.48
SCN8A-204ENST00000546961 ZC2HC1BQ5TFG8 222 aa12.02□□□□□ -0.49
SCN8A-204ENST00000546961 TEX43Q6ZNM6 134 aa12.02□□□□□ -0.49
SCN8A-204ENST00000546961 RPL13AP40429 203 aaKnown RBP12.01□□□□□ -0.49
SCN8A-204ENST00000546961 PRSS2P07478 247 aa12□□□□□ -0.49
SCN8A-204ENST00000546961 LINC01561Q8N1V8 128 aa12□□□□□ -0.49
SCN8A-204ENST00000546961 C2orf88Q9BSF0 95 aa12□□□□□ -0.49
SCN8A-204ENST00000546961 TOMM7Q9P0U1 55 aa12□□□□□ -0.49
SCN8A-204ENST00000546961 CKS1BP61024 79 aa11.99□□□□□ -0.49
SCN8A-204ENST00000546961 C6orf226Q5I0X4 101 aa11.99□□□□□ -0.49
SCN8A-204ENST00000546961 LINC00469Q8N7U9 141 aa11.99□□□□□ -0.49
SCN8A-204ENST00000546961 VCX2Q9H322 139 aa11.99□□□□□ -0.49
SCN8A-204ENST00000546961 PRSS47A8MTI9 375 aa11.98□□□□□ -0.49
SCN8A-204ENST00000546961 ZNF861PO60384 105 aa11.98□□□□□ -0.49
SCN8A-204ENST00000546961 Q6ZN92 141 aa11.98□□□□□ -0.49
SCN8A-204ENST00000546961 ATP5L2Q7Z4Y8 100 aa11.98□□□□□ -0.49
SCN8A-204ENST00000546961 CARHSP1Q9Y2V2 147 aaKnown RBP11.98□□□□□ -0.49
SCN8A-204ENST00000546961 C2orf66Q6UXQ4 117 aa11.97□□□□□ -0.49
SCN8A-204ENST00000546961 MAP1LC3AQ9H492 121 aa11.97□□□□□ -0.49
SCN8A-204ENST00000546961 CYSLTR1Q9Y271 337 aa11.97□□□□□ -0.49
SCN8A-204ENST00000546961 C22orf24Q9Y442 160 aa11.97□□□□□ -0.49
SCN8A-204ENST00000546961 XAGE1AQ9HD64 81 aa11.96□□□□□ -0.49
SCN8A-204ENST00000546961 TSPAN13O95857 204 aa11.95□□□□□ -0.5
SCN8A-204ENST00000546961 LBHQ53QV2 105 aaPredicted RBP11.95□□□□□ -0.5
SCN8A-204ENST00000546961 LINC00173Q6ZV60 143 aa11.95□□□□□ -0.5
SCN8A-204ENST00000546961 Q8N8P6 123 aa11.95□□□□□ -0.5
SCN8A-204ENST00000546961 AMELXQ99217 191 aa11.95□□□□□ -0.5
SCN8A-204ENST00000546961 ALKBH7Q9BT30 221 aaPredicted RBP11.95□□□□□ -0.5
SCN8A-204ENST00000546961 LAMTOR2Q9Y2Q5 125 aa11.95□□□□□ -0.5
SCN8A-204ENST00000546961 CTDSP1Q9GZU7 261 aa11.94□□□□□ -0.5
SCN8A-204ENST00000546961 NUPR1O60356 82 aa11.93□□□□□ -0.5
SCN8A-204ENST00000546961 Q8IZM0 81 aa11.92□□□□□ -0.5
SCN8A-204ENST00000546961 IGIPA6NJ69 53 aa11.91□□□□□ -0.5
SCN8A-204ENST00000546961 ORMDL2Q53FV1 153 aa11.91□□□□□ -0.5
SCN8A-204ENST00000546961 A0A1B0GVG6 124 aa11.89□□□□□ -0.51
SCN8A-204ENST00000546961 CDKN2A-AS1Q9UH64 79 aa11.89□□□□□ -0.51
SCN8A-204ENST00000546961 NPSP0C0P6 89 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms