RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 PMVKQ15126 192 aa11.4□□□□□ -0.58
CD9-211ENST00000546073 C9orf163Q8N9P6 203 aa11.4□□□□□ -0.58
CD9-211ENST00000546073 OR10D4PQ8NGN7 298 aa11.4□□□□□ -0.58
CD9-211ENST00000546073 DNAH17Q9UFH2 4485 aa11.4□□□□□ -0.58
CD9-211ENST00000546073 EPPK1P58107 5090 aaKnown RBP11.4□□□□□ -0.59
CD9-211ENST00000546073 PRSS2P07478 247 aa11.39□□□□□ -0.59
CD9-211ENST00000546073 LINC00242Q5T6M2 205 aa11.39□□□□□ -0.59
CD9-211ENST00000546073 ORAOV1Q8WV07 137 aa11.39□□□□□ -0.59
CD9-211ENST00000546073 CAMK2N2Q96S95 79 aa11.39□□□□□ -0.59
CD9-211ENST00000546073 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
CD9-211ENST00000546073 F8WDY8 70 aa11.38□□□□□ -0.59
CD9-211ENST00000546073 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
CD9-211ENST00000546073 CARD19Q96LW7 228 aa11.38□□□□□ -0.59
CD9-211ENST00000546073 FAT2Q9NYQ8 4349 aa11.37□□□□□ -0.59
CD9-211ENST00000546073 A0A087WZ39 114 aa11.37□□□□□ -0.59
CD9-211ENST00000546073 SYCNQ0VAF6 134 aa11.37□□□□□ -0.59
CD9-211ENST00000546073 LINC01561Q8N1V8 128 aa11.37□□□□□ -0.59
CD9-211ENST00000546073 HECTD4Q9Y4D8 3996 aa11.37□□□□□ -0.59
CD9-211ENST00000546073 SCO1O75880 301 aa11.36□□□□□ -0.59
CD9-211ENST00000546073 PMCHL1Q16048 86 aa11.36□□□□□ -0.59
CD9-211ENST00000546073 LINC01620Q4KN68 170 aa11.36□□□□□ -0.59
CD9-211ENST00000546073 FAM104AQ969W3 186 aa11.36□□□□□ -0.59
CD9-211ENST00000546073 C2orf48Q96LS8 159 aa11.36□□□□□ -0.59
CD9-211ENST00000546073 CST9LQ9H4G1 147 aa11.36□□□□□ -0.59
CD9-211ENST00000546073 IGLV4-69A0A075B6H9 119 aa11.35□□□□□ -0.59
CD9-211ENST00000546073 H3BRM9 83 aa11.35□□□□□ -0.59
CD9-211ENST00000546073 ZC2HC1BQ5TFG8 222 aa11.35□□□□□ -0.59
CD9-211ENST00000546073 LINC00469Q8N7U9 141 aa11.35□□□□□ -0.59
CD9-211ENST00000546073 TINCRA0A1B0GVN0 87 aa11.34□□□□□ -0.59
CD9-211ENST00000546073 NDUFA1O15239 70 aa11.34□□□□□ -0.59
CD9-211ENST00000546073 LINC00173Q6ZV60 143 aa11.34□□□□□ -0.59
CD9-211ENST00000546073 CKS1BP61024 79 aa11.33□□□□□ -0.6
CD9-211ENST00000546073 C6orf226Q5I0X4 101 aa11.33□□□□□ -0.6
CD9-211ENST00000546073 FAM19A3Q7Z5A8 133 aa11.33□□□□□ -0.6
CD9-211ENST00000546073 LINC00474Q9P2X8 69 aa11.33□□□□□ -0.6
CD9-211ENST00000546073 A0A0J9YXV3 536 aa11.32□□□□□ -0.6
CD9-211ENST00000546073 COX6A2Q02221 97 aa11.32□□□□□ -0.6
CD9-211ENST00000546073 PDZD11Q5EBL8 140 aa11.32□□□□□ -0.6
CD9-211ENST00000546073 LINC00526Q96FQ7 95 aa11.32□□□□□ -0.6
CD9-211ENST00000546073 URB1-AS1Q96HZ7 61 aa11.32□□□□□ -0.6
CD9-211ENST00000546073 TOMM7Q9P0U1 55 aa11.32□□□□□ -0.6
CD9-211ENST00000546073 BIRC6Q9NR09 4857 aa11.32□□□□□ -0.6
CD9-211ENST00000546073 FAM229AH3BQW9 127 aa11.31□□□□□ -0.6
CD9-211ENST00000546073 IFI27L1Q96BM0 104 aa11.31□□□□□ -0.6
CD9-211ENST00000546073 HSPB8Q9UJY1 196 aa11.31□□□□□ -0.6
CD9-211ENST00000546073 PKD1P98161 4303 aa11.3□□□□□ -0.6
CD9-211ENST00000546073 LEPROTL1O95214 131 aa11.3□□□□□ -0.6
CD9-211ENST00000546073 SDIM1Q6ZPB5 146 aa11.3□□□□□ -0.6
CD9-211ENST00000546073 CHAC1Q9BUX1 264 aa11.3□□□□□ -0.6
CD9-211ENST00000546073 LOC107984640A0A0U1RRK4 108 aa11.29□□□□□ -0.6
CD9-211ENST00000546073 ATP6V1G1O75348 118 aa11.29□□□□□ -0.6
CD9-211ENST00000546073 SERF1AO75920 110 aa11.29□□□□□ -0.6
CD9-211ENST00000546073 CDKN2A-AS1Q9UH64 79 aa11.29□□□□□ -0.6
CD9-211ENST00000546073 A0A096LNJ9 63 aa11.28□□□□□ -0.6
CD9-211ENST00000546073 SLPIP03973 132 aa11.28□□□□□ -0.6
CD9-211ENST00000546073 FAM19A2Q8N3H0 131 aa11.28□□□□□ -0.6
CD9-211ENST00000546073 FAM30AQ9NZY2 134 aa11.28□□□□□ -0.6
CD9-211ENST00000546073 CHTOPQ9Y3Y2 248 aaKnown RBP11.28□□□□□ -0.6
CD9-211ENST00000546073 XGP55808 180 aa11.27□□□□□ -0.61
CD9-211ENST00000546073 RNF151Q2KHN1 245 aa11.27□□□□□ -0.61
CD9-211ENST00000546073 Q6ZRU5 148 aa11.27□□□□□ -0.61
CD9-211ENST00000546073 Q6ZSA8 131 aa11.27□□□□□ -0.61
CD9-211ENST00000546073 CXCL5P42830 114 aa11.26□□□□□ -0.61
CD9-211ENST00000546073 Q8IZM0 81 aa11.26□□□□□ -0.61
CD9-211ENST00000546073 MRPL35Q9NZE8 188 aaKnown RBP11.26□□□□□ -0.61
CD9-211ENST00000546073 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
CD9-211ENST00000546073 IGKV2-24A0A0C4DH68 120 aa11.25□□□□□ -0.61
CD9-211ENST00000546073 EPM2AB3EWF7 344 aa11.25□□□□□ -0.61
CD9-211ENST00000546073 IGLC3P0DOY3 106 aa11.25□□□□□ -0.61
CD9-211ENST00000546073 RPL18AQ02543 176 aaKnown RBP11.25□□□□□ -0.61
CD9-211ENST00000546073 MAJINQ3KP22 176 aa11.25□□□□□ -0.61
CD9-211ENST00000546073 TMEM170BQ5T4T1 132 aa11.25□□□□□ -0.61
CD9-211ENST00000546073 TRBV30A0A0K0K1B3 111 aa11.24□□□□□ -0.61
CD9-211ENST00000546073 H0Y8G0 127 aa11.24□□□□□ -0.61
CD9-211ENST00000546073 GAGE2BQ13066 116 aa11.24□□□□□ -0.61
CD9-211ENST00000546073 SCXQ7RTU7 201 aa11.24□□□□□ -0.61
CD9-211ENST00000546073 Q8N1X5 172 aa11.24□□□□□ -0.61
CD9-211ENST00000546073 HIST1H2BKO60814 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST1H2BJP06899 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 FABP4P15090 132 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST1H2BOP23527 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST1H2BBP33778 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST1H2BDP58876 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST1H2BCP62807 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST2H2BEQ16778 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.23□□□□□ -0.61
CD9-211ENST00000546073 COX7B2Q8TF08 81 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST1H2BHQ93079 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST1H2BNQ99877 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 HIST1H2BMQ99879 126 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 MAP1LC3CQ9BXW4 147 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 PKHD1P08F94 4074 aa11.23□□□□□ -0.61
CD9-211ENST00000546073 IGLV5-45A0A087WSX0 123 aa11.22□□□□□ -0.61
CD9-211ENST00000546073 SMR3BP02814 79 aaPredicted RBP11.22□□□□□ -0.61
CD9-211ENST00000546073 PLA2G1BP04054 148 aaKnown RBP11.22□□□□□ -0.61
CD9-211ENST00000546073 HAMPP81172 84 aa11.22□□□□□ -0.61
CD9-211ENST00000546073 CIRBP-AS1Q8TBR5 109 aa11.22□□□□□ -0.61
CD9-211ENST00000546073 DNAH11Q96DT5 4516 aa11.21□□□□□ -0.61
CD9-211ENST00000546073 F8VRH5 84 aa11.21□□□□□ -0.61
CD9-211ENST00000546073 SPINK8P0C7L1 97 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms