RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 Q8N2B8 174 aa4.9□□□□□ -1.63
NECAP1-208ENST00000545807 IGIPA6NJ69 53 aa4.89□□□□□ -1.63
NECAP1-208ENST00000545807 LYPD1Q8N2G4 141 aa4.89□□□□□ -1.63
NECAP1-208ENST00000545807 C11orf45Q8TAV5 145 aa4.89□□□□□ -1.63
NECAP1-208ENST00000545807 MRPL53Q96EL3 112 aaKnown RBP4.89□□□□□ -1.63
NECAP1-208ENST00000545807 CCDC140Q96MF4 163 aa4.89□□□□□ -1.63
NECAP1-208ENST00000545807 MAST4O15021 2626 aa4.89□□□□□ -1.63
NECAP1-208ENST00000545807 PVRIGQ6DKI7 326 aa4.89□□□□□ -1.63
NECAP1-208ENST00000545807 U3KQE9 123 aa4.89□□□□□ -1.63
NECAP1-208ENST00000545807 IGKV3D-7A0A0C4DH55 119 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 DEFB1P60022 68 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 TRBV19A0A075B6N1 114 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 LEPROTO15243 131 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 LGALS3P17931 250 aaKnown RBP4.88□□□□□ -1.63
NECAP1-208ENST00000545807 DEFB136Q30KP8 78 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 UNQ9165/PRO28630Q6UXU0 137 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 LITAFQ99732 161 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 TM2D3Q9BRN9 247 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 RBM12B-AS1Q9P1G2 102 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 UBE2E2Q96LR5 201 aa4.88□□□□□ -1.63
NECAP1-208ENST00000545807 IGHV1-58A0A0C4DH39 117 aa4.87□□□□□ -1.63
NECAP1-208ENST00000545807 ADAMTSL4-AS1Q5T5F5 129 aa4.87□□□□□ -1.63
NECAP1-208ENST00000545807 C6orf223Q8N319 242 aa4.87□□□□□ -1.63
NECAP1-208ENST00000545807 NACAE9PAV3 2078 aa4.87□□□□□ -1.63
NECAP1-208ENST00000545807 C2orf66Q6UXQ4 117 aa4.87□□□□□ -1.63
NECAP1-208ENST00000545807 C18orf65Q6ZTR6 163 aa4.87□□□□□ -1.63
NECAP1-208ENST00000545807 TMEM61Q8N0U2 210 aa4.87□□□□□ -1.63
NECAP1-208ENST00000545807 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
NECAP1-208ENST00000545807 KRTAP3-2Q9BYR7 98 aa4.87□□□□□ -1.63
NECAP1-208ENST00000545807 TRAV7A0A075B6U4 112 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 IGKV2-40A0A087WW87 121 aaPredicted RBP4.86□□□□□ -1.63
NECAP1-208ENST00000545807 COX7A2LO14548 114 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 NDUFC1O43677 76 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 IGKV2D-40P01614 121 aaPredicted RBP4.86□□□□□ -1.63
NECAP1-208ENST00000545807 Q8TAT8 98 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 TENM1Q9UKZ4 2725 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 TRAV13-2A0A0B4J235 113 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 NXPH4O95158 308 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 TSHBP01222 138 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 RPL28P46779 137 aaKnown RBP4.86□□□□□ -1.63
NECAP1-208ENST00000545807 RBM3P98179 157 aaKnown RBP4.86□□□□□ -1.63
NECAP1-208ENST00000545807 ATP5EP2Q5VTU8 51 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 STAB1Q9NY15 2570 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 H3BRN7 92 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 DGAT2L7PQ6IED9 249 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 LINC00846Q9NV44 126 aa4.86□□□□□ -1.63
NECAP1-208ENST00000545807 A0A0J9YXY3 114 aa4.85□□□□□ -1.63
NECAP1-208ENST00000545807 Q6YL49 198 aa4.85□□□□□ -1.63
NECAP1-208ENST00000545807 OBSCN-AS1Q96MR7 158 aa4.85□□□□□ -1.63
NECAP1-208ENST00000545807 BAALC-AS2P0C853 105 aa4.85□□□□□ -1.63
NECAP1-208ENST00000545807 FAM229BQ4G0N7 80 aa4.85□□□□□ -1.63
NECAP1-208ENST00000545807 IGHV4-4A0A075B6R2 117 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 IGF1P05019 195 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 ZNF80P51504 273 aaPredicted RBP4.84□□□□□ -1.63
NECAP1-208ENST00000545807 ZNF876PQ49A33 203 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 VWFP04275 2813 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 TRBV10-3A0A0K0K1G6 114 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 PRAC2D3DTV9 90 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 F8WEM9 126 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 APOC4P55056 127 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.84□□□□□ -1.63
NECAP1-208ENST00000545807 ESM1Q9NQ30 184 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 SMAD5-AS1Q9Y6J3 95 aa4.84□□□□□ -1.63
NECAP1-208ENST00000545807 CLPSL1A2RUU4 121 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 DNAJC9-AS1A6NH13 148 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 DNAL4O96015 105 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 IGKV3-20P01619 116 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 HOXD3P31249 432 aaPredicted RBP4.83□□□□□ -1.64
NECAP1-208ENST00000545807 SUMO2P61956 95 aaKnown RBP4.83□□□□□ -1.64
NECAP1-208ENST00000545807 KTN1-AS1Q86SY8 53 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 ZFAND3Q9H8U3 227 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 COL6A5A8TX70 2615 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 NBEAL2Q6ZNJ1 2754 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 F6UB75 175 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 H3BS24 57 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 MIAQ16674 131 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 ZNF702PQ9H963 129 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 Q6ZSV7 163 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 TMEM141Q96I45 108 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 TIMM17AQ99595 171 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 AKAP9Q99996 3911 aa4.83□□□□□ -1.64
NECAP1-208ENST00000545807 KRTAP1-1Q07627 177 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 PDE6HQ13956 83 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 RHPN1-AS1Q9BWJ2 59 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 IGHV4OR15-8A0A075B7B6 117 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 A0A087WW49 117 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 INAFM1C9JVW0 142 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 LY6G6DO95868 133 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 FSHBP01225 129 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 SLURP1P55000 103 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 DAD1P61803 113 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 MPLKIPQ8TAP9 179 aa4.82□□□□□ -1.64
NECAP1-208ENST00000545807 TRAV23DV6A0A075B6W5 121 aa4.81□□□□□ -1.64
NECAP1-208ENST00000545807 C19orf54Q5BKX5 351 aa4.81□□□□□ -1.64
NECAP1-208ENST00000545807 TRBV27A0A0K0K1C4 114 aa4.81□□□□□ -1.64
NECAP1-208ENST00000545807 M0R381 172 aa4.81□□□□□ -1.64
NECAP1-208ENST00000545807 IGLV1-40P01703 118 aa4.81□□□□□ -1.64
NECAP1-208ENST00000545807 RNASE4P34096 147 aaKnown RBP4.81□□□□□ -1.64
NECAP1-208ENST00000545807 ESRGQ1W209 222 aa4.81□□□□□ -1.64
NECAP1-208ENST00000545807 RMI2Q96E14 147 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms