RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 CT83Q5H943 113 aa8.59□□□□□ -1.03
RTN3-214ENST00000545432 C9orf129Q5T035 196 aaKnown RBP8.59□□□□□ -1.03
RTN3-214ENST00000545432 GAGE2DQ9UEU5 116 aa8.59□□□□□ -1.03
RTN3-214ENST00000545432 NUPR1O60356 82 aa8.58□□□□□ -1.04
RTN3-214ENST00000545432 CTAG1AP78358 180 aa8.58□□□□□ -1.04
RTN3-214ENST00000545432 NRACQ8N912 160 aa8.58□□□□□ -1.04
RTN3-214ENST00000545432 TRBV30A0A0K0K1B3 111 aa8.57□□□□□ -1.04
RTN3-214ENST00000545432 FCER1GP30273 86 aa8.57□□□□□ -1.04
RTN3-214ENST00000545432 NDUFC2-KCTD14E9PQ53 114 aa8.56□□□□□ -1.04
RTN3-214ENST00000545432 GATCO43716 136 aaKnown RBP8.56□□□□□ -1.04
RTN3-214ENST00000545432 PPP1R17O96001 155 aa8.56□□□□□ -1.04
RTN3-214ENST00000545432 CRYGAP11844 174 aa8.56□□□□□ -1.04
RTN3-214ENST00000545432 TAGLN2P37802 199 aaKnown RBP8.56□□□□□ -1.04
RTN3-214ENST00000545432 SUMO2P61956 95 aaKnown RBP8.56□□□□□ -1.04
RTN3-214ENST00000545432 TYMSOSQ8TAI1 123 aa8.56□□□□□ -1.04
RTN3-214ENST00000545432 A0A1B0GUT8 65 aa8.55□□□□□ -1.04
RTN3-214ENST00000545432 MRPS36P82909 103 aaKnown RBP8.55□□□□□ -1.04
RTN3-214ENST00000545432 AMN1Q8IY45 258 aa8.55□□□□□ -1.04
RTN3-214ENST00000545432 TMEM18Q96B42 140 aa8.55□□□□□ -1.04
RTN3-214ENST00000545432 KIR2DL4Q99706 377 aa8.55□□□□□ -1.04
RTN3-214ENST00000545432 RPL32P62910 135 aaKnown RBP8.54□□□□□ -1.04
RTN3-214ENST00000545432 CDIP1Q9H305 208 aa8.54□□□□□ -1.04
RTN3-214ENST00000545432 KRTAP13-2Q52LG2 175 aa8.53□□□□□ -1.04
RTN3-214ENST00000545432 LINC00242Q5T6M2 205 aa8.53□□□□□ -1.04
RTN3-214ENST00000545432 CTDSP1Q9GZU7 261 aa8.53□□□□□ -1.04
RTN3-214ENST00000545432 SMKR1H3BMG3 65 aa8.52□□□□□ -1.05
RTN3-214ENST00000545432 PPP1R2P9O14990 202 aa8.52□□□□□ -1.05
RTN3-214ENST00000545432 SLC51BQ86UW2 128 aa8.52□□□□□ -1.05
RTN3-214ENST00000545432 TCTE3Q8IZS6 198 aa8.52□□□□□ -1.05
RTN3-214ENST00000545432 SPANXA1Q9NS26 97 aa8.52□□□□□ -1.05
RTN3-214ENST00000545432 C22orf24Q9Y442 160 aa8.52□□□□□ -1.05
RTN3-214ENST00000545432 IGLV7-46A0A075B6I9 117 aa8.51□□□□□ -1.05
RTN3-214ENST00000545432 TRBV24-1A0A075B6N3 115 aa8.51□□□□□ -1.05
RTN3-214ENST00000545432 HIGD1CA8MV81 97 aa8.51□□□□□ -1.05
RTN3-214ENST00000545432 BORCS7Q96B45 105 aa8.51□□□□□ -1.05
RTN3-214ENST00000545432 RETNLBQ9BQ08 111 aa8.51□□□□□ -1.05
RTN3-214ENST00000545432 C20orf78Q9BR46 151 aa8.51□□□□□ -1.05
RTN3-214ENST00000545432 TMEM250H0YL14 139 aa8.5□□□□□ -1.05
RTN3-214ENST00000545432 TCAPO15273 167 aa8.5□□□□□ -1.05
RTN3-214ENST00000545432 RPL28P46779 137 aaKnown RBP8.5□□□□□ -1.05
RTN3-214ENST00000545432 RPL39P62891 51 aaKnown RBP8.5□□□□□ -1.05
RTN3-214ENST00000545432 LBHQ53QV2 105 aaPredicted RBP8.5□□□□□ -1.05
RTN3-214ENST00000545432 LINC01561Q8N1V8 128 aa8.5□□□□□ -1.05
RTN3-214ENST00000545432 TP73-AS1Q9UF72 201 aa8.5□□□□□ -1.05
RTN3-214ENST00000545432 BCE1O60756 84 aa8.49□□□□□ -1.05
RTN3-214ENST00000545432 C2orf82Q6UX34 121 aa8.49□□□□□ -1.05
RTN3-214ENST00000545432 PACRGQ96M98 296 aaPredicted RBP8.49□□□□□ -1.05
RTN3-214ENST00000545432 LINC00862A6NCI5 91 aa8.48□□□□□ -1.05
RTN3-214ENST00000545432 HBBP68871 147 aa8.48□□□□□ -1.05
RTN3-214ENST00000545432 FAM229BQ4G0N7 80 aa8.48□□□□□ -1.05
RTN3-214ENST00000545432 KRTAP13-1Q8IUC0 172 aa8.48□□□□□ -1.05
RTN3-214ENST00000545432 ZNF727A8MUV8 499 aa8.47□□□□□ -1.05
RTN3-214ENST00000545432 LINC00173Q6ZV60 143 aa8.47□□□□□ -1.05
RTN3-214ENST00000545432 LINC00304Q8N9R0 145 aa8.47□□□□□ -1.05
RTN3-214ENST00000545432 ANAPC11Q9NYG5 84 aa8.47□□□□□ -1.05
RTN3-214ENST00000545432 TGIF2-C20orf24A0A0A6YYL0 155 aa8.46□□□□□ -1.06
RTN3-214ENST00000545432 IFITM10A6NMD0 228 aa8.46□□□□□ -1.06
RTN3-214ENST00000545432 MRPL51Q4U2R6 128 aaKnown RBP8.46□□□□□ -1.06
RTN3-214ENST00000545432 FAM104BQ5XKR9 115 aa8.46□□□□□ -1.06
RTN3-214ENST00000545432 OSTCQ9NRP0 149 aa8.46□□□□□ -1.06
RTN3-214ENST00000545432 LINC01547P58512 204 aaPredicted RBP8.45□□□□□ -1.06
RTN3-214ENST00000545432 RIGQ13278 110 aa8.45□□□□□ -1.06
RTN3-214ENST00000545432 PYGO1Q9Y3Y4 419 aa8.45□□□□□ -1.06
RTN3-214ENST00000545432 BLOC1S1P78537 153 aa8.44□□□□□ -1.06
RTN3-214ENST00000545432 ASB16-AS1Q495Z4 193 aa8.44□□□□□ -1.06
RTN3-214ENST00000545432 MRPL55Q7Z7F7 128 aaKnown RBP8.44□□□□□ -1.06
RTN3-214ENST00000545432 LINC01551Q86U37 167 aa8.43□□□□□ -1.06
RTN3-214ENST00000545432 SMIM2Q9BVW6 85 aa8.43□□□□□ -1.06
RTN3-214ENST00000545432 KRTAP4-1Q9BYQ7 146 aa8.43□□□□□ -1.06
RTN3-214ENST00000545432 PPDPFQ9H3Y8 114 aa8.43□□□□□ -1.06
RTN3-214ENST00000545432 V9GYV3 84 aa8.43□□□□□ -1.06
RTN3-214ENST00000545432 AKAP14Q86UN6 197 aa8.42□□□□□ -1.06
RTN3-214ENST00000545432 TNFRSF6BO95407 300 aa8.41□□□□□ -1.06
RTN3-214ENST00000545432 LINC00469Q8N7U9 141 aa8.41□□□□□ -1.06
RTN3-214ENST00000545432 LINC00167Q96N53 147 aa8.41□□□□□ -1.06
RTN3-214ENST00000545432 XAGE1AQ9HD64 81 aa8.41□□□□□ -1.06
RTN3-214ENST00000545432 IGLV4-3A0A075B6K6 122 aa8.4□□□□□ -1.06
RTN3-214ENST00000545432 CKS2P33552 79 aa8.39□□□□□ -1.07
RTN3-214ENST00000545432 CEBPGP53567 150 aa8.39□□□□□ -1.07
RTN3-214ENST00000545432 ALKAL2Q6UX46 152 aa8.39□□□□□ -1.07
RTN3-214ENST00000545432 FAM19A3Q7Z5A8 133 aa8.39□□□□□ -1.07
RTN3-214ENST00000545432 Q8IZM0 81 aa8.39□□□□□ -1.07
RTN3-214ENST00000545432 IFI27P40305 119 aaPredicted RBP8.38□□□□□ -1.07
RTN3-214ENST00000545432 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
RTN3-214ENST00000545432 Q6ZN92 141 aa8.38□□□□□ -1.07
RTN3-214ENST00000545432 FP248Q71RG6 208 aaPredicted RBP8.38□□□□□ -1.07
RTN3-214ENST00000545432 NAT8BQ9UHF3 227 aa8.38□□□□□ -1.07
RTN3-214ENST00000545432 IGLV5-37A0A075B6J1 123 aa8.37□□□□□ -1.07
RTN3-214ENST00000545432 FAM74A3Q4VXF1 159 aa8.37□□□□□ -1.07
RTN3-214ENST00000545432 TMEM141Q96I45 108 aa8.37□□□□□ -1.07
RTN3-214ENST00000545432 SMIM7Q9BQ49 75 aa8.37□□□□□ -1.07
RTN3-214ENST00000545432 EIF5A2Q9GZV4 153 aaKnown RBP8.37□□□□□ -1.07
RTN3-214ENST00000545432 IGKV2D-26A0A0A0MRZ7 120 aa8.36□□□□□ -1.07
RTN3-214ENST00000545432 CKS1BP61024 79 aa8.36□□□□□ -1.07
RTN3-214ENST00000545432 C6orf226Q5I0X4 101 aa8.36□□□□□ -1.07
RTN3-214ENST00000545432 LCE2CQ5TA81 110 aa8.36□□□□□ -1.07
RTN3-214ENST00000545432 AMELXQ99217 191 aa8.36□□□□□ -1.07
RTN3-214ENST00000545432 A0A1B0GW15 77 aa8.35□□□□□ -1.07
RTN3-214ENST00000545432 RPL37AP8A6NKH3 93 aa8.35□□□□□ -1.07
RTN3-214ENST00000545432 PRSS47A8MTI9 375 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms