RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 C2orf88Q9BSF0 95 aa8.69□□□□□ -1.02
DDX11-227ENST00000544652 FRAS1Q86XX4 4008 aa8.69□□□□□ -1.02
DDX11-227ENST00000544652 TRAV13-1A0A0B4J241 112 aa8.68□□□□□ -1.02
DDX11-227ENST00000544652 PMVKQ15126 192 aa8.68□□□□□ -1.02
DDX11-227ENST00000544652 IFI27L1Q96BM0 104 aa8.68□□□□□ -1.02
DDX11-227ENST00000544652 PACRGQ96M98 296 aaPredicted RBP8.68□□□□□ -1.02
DDX11-227ENST00000544652 FOXI1Q12951 378 aa8.67□□□□□ -1.02
DDX11-227ENST00000544652 LINC00242Q5T6M2 205 aa8.67□□□□□ -1.02
DDX11-227ENST00000544652 CD164L2Q6UWJ8 174 aa8.67□□□□□ -1.02
DDX11-227ENST00000544652 CST9LQ9H4G1 147 aa8.67□□□□□ -1.02
DDX11-227ENST00000544652 LRCOL1A6NCL2 159 aa8.66□□□□□ -1.02
DDX11-227ENST00000544652 GAGE12HA6NDE8 117 aa8.66□□□□□ -1.02
DDX11-227ENST00000544652 PSCAO43653 123 aa8.66□□□□□ -1.02
DDX11-227ENST00000544652 MALP21145 153 aa8.66□□□□□ -1.02
DDX11-227ENST00000544652 LINC00336Q6ZUF6 198 aa8.66□□□□□ -1.02
DDX11-227ENST00000544652 HSPB8Q9UJY1 196 aa8.66□□□□□ -1.02
DDX11-227ENST00000544652 DNAH2Q9P225 4427 aa8.65□□□□□ -1.02
DDX11-227ENST00000544652 TRAV12-1A0A0B4J245 112 aa8.65□□□□□ -1.02
DDX11-227ENST00000544652 IGHV3OR16-9A0A0B4J2B5 98 aa8.65□□□□□ -1.02
DDX11-227ENST00000544652 PRSS29PA6NIE9 313 aa8.65□□□□□ -1.02
DDX11-227ENST00000544652 S100A6P06703 90 aa8.65□□□□□ -1.02
DDX11-227ENST00000544652 XCL1P47992 114 aa8.65□□□□□ -1.02
DDX11-227ENST00000544652 DNAH10Q8IVF4 4471 aa8.65□□□□□ -1.03
DDX11-227ENST00000544652 FABP4P15090 132 aa8.64□□□□□ -1.03
DDX11-227ENST00000544652 SEC11AP67812 179 aa8.64□□□□□ -1.03
DDX11-227ENST00000544652 HIST3H2BBQ8N257 126 aa8.64□□□□□ -1.03
DDX11-227ENST00000544652 RYR3Q15413 4870 aa8.64□□□□□ -1.03
DDX11-227ENST00000544652 A0A087WTM6 91 aa8.63□□□□□ -1.03
DDX11-227ENST00000544652 A0A0J9YXV3 536 aa8.63□□□□□ -1.03
DDX11-227ENST00000544652 TINCRA0A1B0GVN0 87 aa8.63□□□□□ -1.03
DDX11-227ENST00000544652 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
DDX11-227ENST00000544652 PRSS1P07477 247 aa8.63□□□□□ -1.03
DDX11-227ENST00000544652 COX6A2Q02221 97 aa8.63□□□□□ -1.03
DDX11-227ENST00000544652 IGLV4-69A0A075B6H9 119 aa8.62□□□□□ -1.03
DDX11-227ENST00000544652 IGLV5-45A0A087WSX0 123 aa8.62□□□□□ -1.03
DDX11-227ENST00000544652 IGLC3P0DOY3 106 aa8.62□□□□□ -1.03
DDX11-227ENST00000544652 HERVK_113P63121 156 aa8.62□□□□□ -1.03
DDX11-227ENST00000544652 WFDC2Q14508 124 aa8.62□□□□□ -1.03
DDX11-227ENST00000544652 DNAH17Q9UFH2 4485 aa8.62□□□□□ -1.03
DDX11-227ENST00000544652 A0A087WZ39 114 aa8.61□□□□□ -1.03
DDX11-227ENST00000544652 SNRPEP62304 92 aaKnown RBP8.61□□□□□ -1.03
DDX11-227ENST00000544652 SPATA12Q7Z6I5 190 aa8.61□□□□□ -1.03
DDX11-227ENST00000544652 LINC01561Q8N1V8 128 aa8.61□□□□□ -1.03
DDX11-227ENST00000544652 MAP1LC3CQ9BXW4 147 aa8.61□□□□□ -1.03
DDX11-227ENST00000544652 USP17L23D6RBM5 183 aa8.6□□□□□ -1.03
DDX11-227ENST00000544652 F8VRH5 84 aa8.6□□□□□ -1.03
DDX11-227ENST00000544652 COX7A2LO14548 114 aa8.6□□□□□ -1.03
DDX11-227ENST00000544652 C15orf56Q8N910 161 aa8.6□□□□□ -1.03
DDX11-227ENST00000544652 CHTOPQ9Y3Y2 248 aaKnown RBP8.6□□□□□ -1.03
DDX11-227ENST00000544652 IGHV1-58A0A0C4DH39 117 aa8.59□□□□□ -1.03
DDX11-227ENST00000544652 SYS1-DBNDD2H3BUS1 97 aa8.59□□□□□ -1.03
DDX11-227ENST00000544652 C5orf38Q86SI9 138 aa8.59□□□□□ -1.03
DDX11-227ENST00000544652 Q8N814 137 aa8.59□□□□□ -1.03
DDX11-227ENST00000544652 HIST1H2BLQ99880 126 aa8.59□□□□□ -1.03
DDX11-227ENST00000544652 CHAC1Q9BUX1 264 aa8.59□□□□□ -1.03
DDX11-227ENST00000544652 GEMIN7Q9H840 131 aaKnown RBP8.59□□□□□ -1.03
DDX11-227ENST00000544652 CDKN2A-AS1Q9UH64 79 aa8.59□□□□□ -1.03
DDX11-227ENST00000544652 A0A1B0GVY2 172 aa8.58□□□□□ -1.04
DDX11-227ENST00000544652 LECT2O14960 151 aa8.58□□□□□ -1.04
DDX11-227ENST00000544652 C3orf79P0CE67 100 aa8.58□□□□□ -1.04
DDX11-227ENST00000544652 S100A2P29034 98 aa8.58□□□□□ -1.04
DDX11-227ENST00000544652 C14orf177Q52M58 125 aa8.58□□□□□ -1.04
DDX11-227ENST00000544652 CFAP161Q6P656 301 aa8.58□□□□□ -1.04
DDX11-227ENST00000544652 MRPL35Q9NZE8 188 aaKnown RBP8.58□□□□□ -1.04
DDX11-227ENST00000544652 IGHV3-64A0A075B6Q5 118 aa8.57□□□□□ -1.04
DDX11-227ENST00000544652 GVQW2A0A096LPI5 108 aaPredicted RBP8.57□□□□□ -1.04
DDX11-227ENST00000544652 C11orf86A6NJI1 115 aa8.57□□□□□ -1.04
DDX11-227ENST00000544652 APOMO95445 188 aa8.57□□□□□ -1.04
DDX11-227ENST00000544652 ZNF22P17026 224 aaPredicted RBP8.57□□□□□ -1.04
DDX11-227ENST00000544652 PET117Q6UWS5 81 aa8.57□□□□□ -1.04
DDX11-227ENST00000544652 FAT2Q9NYQ8 4349 aa8.56□□□□□ -1.04
DDX11-227ENST00000544652 H0Y8G0 127 aa8.56□□□□□ -1.04
DDX11-227ENST00000544652 LINC01545Q5VT33 79 aa8.56□□□□□ -1.04
DDX11-227ENST00000544652 LINC00469Q8N7U9 141 aa8.56□□□□□ -1.04
DDX11-227ENST00000544652 OR10D4PQ8NGN7 298 aa8.55□□□□□ -1.04
DDX11-227ENST00000544652 SMIM1B2RUZ4 78 aa8.54□□□□□ -1.04
DDX11-227ENST00000544652 PLNP26678 52 aa8.54□□□□□ -1.04
DDX11-227ENST00000544652 KRTDAPP60985 99 aa8.54□□□□□ -1.04
DDX11-227ENST00000544652 hDV102S1A0JD36 115 aa8.53□□□□□ -1.04
DDX11-227ENST00000544652 H3BRM9 83 aa8.53□□□□□ -1.04
DDX11-227ENST00000544652 DPM2O94777 84 aa8.53□□□□□ -1.04
DDX11-227ENST00000544652 KIAA0087Q14695 138 aa8.53□□□□□ -1.04
DDX11-227ENST00000544652 NTN5Q8WTR8 489 aaPredicted RBP8.53□□□□□ -1.04
DDX11-227ENST00000544652 ORAOV1Q8WV07 137 aa8.53□□□□□ -1.04
DDX11-227ENST00000544652 PKD1P98161 4303 aa8.53□□□□□ -1.04
DDX11-227ENST00000544652 TMEM223A0PJW6 202 aa8.52□□□□□ -1.05
DDX11-227ENST00000544652 IGKCP01834 107 aa8.52□□□□□ -1.05
DDX11-227ENST00000544652 SLPIP03973 132 aa8.52□□□□□ -1.05
DDX11-227ENST00000544652 KRTAP10-2P60368 255 aa8.52□□□□□ -1.05
DDX11-227ENST00000544652 CNBPP62633 177 aaKnown RBP8.52□□□□□ -1.05
DDX11-227ENST00000544652 HIGD2BQ4VC39 106 aa8.52□□□□□ -1.05
DDX11-227ENST00000544652 TMEM170BQ5T4T1 132 aa8.52□□□□□ -1.05
DDX11-227ENST00000544652 PMCHL2Q9BQD1 86 aa8.52□□□□□ -1.05
DDX11-227ENST00000544652 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.51□□□□□ -1.05
DDX11-227ENST00000544652 IGLV5-39A0A0G2JS06 123 aa8.51□□□□□ -1.05
DDX11-227ENST00000544652 F8WDY8 70 aa8.51□□□□□ -1.05
DDX11-227ENST00000544652 SPINK8P0C7L1 97 aa8.51□□□□□ -1.05
DDX11-227ENST00000544652 SPAG11BQ08648 103 aa8.51□□□□□ -1.05
DDX11-227ENST00000544652 Q8IZM0 81 aa8.51□□□□□ -1.05
DDX11-227ENST00000544652 C2orf48Q96LS8 159 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms