RNA–Protein interactions for RNA: ENST00000544513.1

SEMA4D-224, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-224ENST00000544513 IGHV3OR16-9A0A0B4J2B5 98 aa8.45□□□□□ -1.06
SEMA4D-224ENST00000544513 F8WDY8 70 aa8.45□□□□□ -1.06
SEMA4D-224ENST00000544513 RPL18AQ02543 176 aaKnown RBP8.45□□□□□ -1.06
SEMA4D-224ENST00000544513 NDUFA5Q16718 116 aa8.45□□□□□ -1.06
SEMA4D-224ENST00000544513 FAM74A3Q4VXF1 159 aa8.45□□□□□ -1.06
SEMA4D-224ENST00000544513 TMEM18Q96B42 140 aa8.45□□□□□ -1.06
SEMA4D-224ENST00000544513 SMIM27A0A1W2PRY6 76 aa8.44□□□□□ -1.06
SEMA4D-224ENST00000544513 RPL39P62891 51 aaKnown RBP8.44□□□□□ -1.06
SEMA4D-224ENST00000544513 C1orf137Q5JT78 98 aa8.44□□□□□ -1.06
SEMA4D-224ENST00000544513 TCAPO15273 167 aa8.43□□□□□ -1.06
SEMA4D-224ENST00000544513 TLX1NBP0CAT3 122 aa8.43□□□□□ -1.06
SEMA4D-224ENST00000544513 RPL23P62829 140 aaKnown RBP8.43□□□□□ -1.06
SEMA4D-224ENST00000544513 MRPS36P82909 103 aaKnown RBP8.43□□□□□ -1.06
SEMA4D-224ENST00000544513 TMEM241Q24JQ0 296 aa8.43□□□□□ -1.06
SEMA4D-224ENST00000544513 KRTAP11-1Q8IUC1 163 aa8.43□□□□□ -1.06
SEMA4D-224ENST00000544513 SPANXA1Q9NS26 97 aa8.43□□□□□ -1.06
SEMA4D-224ENST00000544513 A0A1B0GW15 77 aa8.42□□□□□ -1.06
SEMA4D-224ENST00000544513 C9JQL5 133 aa8.42□□□□□ -1.06
SEMA4D-224ENST00000544513 TNFRSF6BO95407 300 aa8.42□□□□□ -1.06
SEMA4D-224ENST00000544513 IGLV7-43P04211 117 aa8.42□□□□□ -1.06
SEMA4D-224ENST00000544513 C10orf25Q5T742 122 aa8.42□□□□□ -1.06
SEMA4D-224ENST00000544513 ORAOV1Q8WV07 137 aa8.42□□□□□ -1.06
SEMA4D-224ENST00000544513 DIRC1Q969H9 104 aa8.42□□□□□ -1.06
SEMA4D-224ENST00000544513 IMMP2LQ96T52 175 aa8.42□□□□□ -1.06
SEMA4D-224ENST00000544513 MUC2Q02817 5179 aa8.41□□□□□ -1.06
SEMA4D-224ENST00000544513 FAM168BA1KXE4 195 aa8.41□□□□□ -1.06
SEMA4D-224ENST00000544513 NDUFA1O15239 70 aa8.41□□□□□ -1.06
SEMA4D-224ENST00000544513 CKS2P33552 79 aa8.41□□□□□ -1.06
SEMA4D-224ENST00000544513 SMIM2Q9BVW6 85 aa8.41□□□□□ -1.06
SEMA4D-224ENST00000544513 TMEM218A2RU14 115 aa8.4□□□□□ -1.06
SEMA4D-224ENST00000544513 F8W036 122 aa8.4□□□□□ -1.06
SEMA4D-224ENST00000544513 UNQ6190/PRO20217Q6UXQ8 127 aa8.4□□□□□ -1.06
SEMA4D-224ENST00000544513 KRTAP7-1Q8IUC3 87 aa8.4□□□□□ -1.06
SEMA4D-224ENST00000544513 PRR26Q8N8Z3 221 aa8.4□□□□□ -1.06
SEMA4D-224ENST00000544513 C6orf48Q9UBA6 75 aa8.4□□□□□ -1.06
SEMA4D-224ENST00000544513 NAT8Q9UHE5 227 aa8.4□□□□□ -1.06
SEMA4D-224ENST00000544513 H0Y9J4 135 aa8.39□□□□□ -1.07
SEMA4D-224ENST00000544513 HBBP68871 147 aa8.39□□□□□ -1.07
SEMA4D-224ENST00000544513 KIAA0087Q14695 138 aa8.39□□□□□ -1.07
SEMA4D-224ENST00000544513 ADIRFQ15847 76 aa8.39□□□□□ -1.07
SEMA4D-224ENST00000544513 A0A087WZ39 114 aa8.38□□□□□ -1.07
SEMA4D-224ENST00000544513 A0A1B0GXF2 115 aa8.38□□□□□ -1.07
SEMA4D-224ENST00000544513 D6R8Y8 96 aa8.38□□□□□ -1.07
SEMA4D-224ENST00000544513 PNRC1Q12796 327 aaPredicted RBP8.38□□□□□ -1.07
SEMA4D-224ENST00000544513 SEC11CQ9BY50 192 aa8.38□□□□□ -1.07
SEMA4D-224ENST00000544513 IFITM10A6NMD0 228 aa8.37□□□□□ -1.07
SEMA4D-224ENST00000544513 NPYP01303 97 aa8.37□□□□□ -1.07
SEMA4D-224ENST00000544513 KRTAP1-4P0C5Y4 121 aa8.37□□□□□ -1.07
SEMA4D-224ENST00000544513 SLC7A5P1Q8MH63 180 aa8.37□□□□□ -1.07
SEMA4D-224ENST00000544513 PPBPP02775 128 aa8.36□□□□□ -1.07
SEMA4D-224ENST00000544513 S100A8P05109 93 aa8.36□□□□□ -1.07
SEMA4D-224ENST00000544513 FAM19A5Q7Z5A7 132 aaPredicted RBP8.36□□□□□ -1.07
SEMA4D-224ENST00000544513 PYGO1Q9Y3Y4 419 aa8.36□□□□□ -1.07
SEMA4D-224ENST00000544513 IGLV1-50A0A075B6I6 118 aa8.35□□□□□ -1.07
SEMA4D-224ENST00000544513 TGIF2-C20orf24A0A0A6YYL0 155 aa8.35□□□□□ -1.07
SEMA4D-224ENST00000544513 ADCYAP1P18509 176 aa8.35□□□□□ -1.07
SEMA4D-224ENST00000544513 GAGE2EQ4V326 116 aa8.35□□□□□ -1.07
SEMA4D-224ENST00000544513 LINC00242Q5T6M2 205 aa8.35□□□□□ -1.07
SEMA4D-224ENST00000544513 MRPL54Q6P161 138 aaKnown RBP8.35□□□□□ -1.07
SEMA4D-224ENST00000544513 GAGE2DQ9UEU5 116 aa8.35□□□□□ -1.07
SEMA4D-224ENST00000544513 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
SEMA4D-224ENST00000544513 CARHSP1Q9Y2V2 147 aaKnown RBP8.34□□□□□ -1.07
SEMA4D-224ENST00000544513 IGLV4-3A0A075B6K6 122 aa8.33□□□□□ -1.08
SEMA4D-224ENST00000544513 NDUFC2-KCTD14E9PQ53 114 aa8.33□□□□□ -1.08
SEMA4D-224ENST00000544513 C10orf91Q5T1B1 145 aa8.33□□□□□ -1.08
SEMA4D-224ENST00000544513 PRSS47A8MTI9 375 aa8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 M0QXV9 152 aa8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 APOC3P02656 99 aa8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 RAB5AP20339 215 aa8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 IFI27P40305 119 aaPredicted RBP8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 C9orf129Q5T035 196 aaKnown RBP8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 TMEM136Q6ZRR5 245 aa8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 ORMDL3Q8N138 153 aa8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
SEMA4D-224ENST00000544513 MT-ND4LP03901 98 aa8.31□□□□□ -1.08
SEMA4D-224ENST00000544513 UBE2D1P51668 147 aa8.31□□□□□ -1.08
SEMA4D-224ENST00000544513 ATP5L2Q7Z4Y8 100 aa8.31□□□□□ -1.08
SEMA4D-224ENST00000544513 SVBPQ8N300 66 aa8.31□□□□□ -1.08
SEMA4D-224ENST00000544513 TMEM141Q96I45 108 aa8.31□□□□□ -1.08
SEMA4D-224ENST00000544513 PRELID3AQ96N28 172 aa8.31□□□□□ -1.08
SEMA4D-224ENST00000544513 SNAPINO95295 136 aa8.3□□□□□ -1.08
SEMA4D-224ENST00000544513 ANAPC16Q96DE5 110 aa8.3□□□□□ -1.08
SEMA4D-224ENST00000544513 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
SEMA4D-224ENST00000544513 UBE2BP63146 152 aa8.29□□□□□ -1.08
SEMA4D-224ENST00000544513 RHEBQ15382 184 aa8.29□□□□□ -1.08
SEMA4D-224ENST00000544513 LINC00173Q6ZV60 143 aa8.29□□□□□ -1.08
SEMA4D-224ENST00000544513 TEX43Q6ZNM6 134 aa8.28□□□□□ -1.08
SEMA4D-224ENST00000544513 PACRGQ96M98 296 aaPredicted RBP8.28□□□□□ -1.08
SEMA4D-224ENST00000544513 AMELXQ99217 191 aa8.28□□□□□ -1.08
SEMA4D-224ENST00000544513 CTDSP1Q9GZU7 261 aa8.28□□□□□ -1.08
SEMA4D-224ENST00000544513 LAMTOR2Q9Y2Q5 125 aa8.28□□□□□ -1.08
SEMA4D-224ENST00000544513 ZC2HC1BQ5TFG8 222 aa8.27□□□□□ -1.09
SEMA4D-224ENST00000544513 FAM19A3Q7Z5A8 133 aa8.27□□□□□ -1.09
SEMA4D-224ENST00000544513 ZNF861PO60384 105 aa8.26□□□□□ -1.09
SEMA4D-224ENST00000544513 NPSP0C0P6 89 aa8.26□□□□□ -1.09
SEMA4D-224ENST00000544513 C2orf88Q9BSF0 95 aa8.26□□□□□ -1.09
SEMA4D-224ENST00000544513 RPS10P5Q9NQ39 176 aa8.26□□□□□ -1.09
SEMA4D-224ENST00000544513 LOC389332A0A1B0GUA5 103 aa8.25□□□□□ -1.09
SEMA4D-224ENST00000544513 IGIPA6NJ69 53 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms