RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 KIAA0087Q14695 138 aa5.53□□□□□ -1.52
C2CD3-220ENST00000544293 C9orf129Q5T035 196 aaKnown RBP5.53□□□□□ -1.52
C2CD3-220ENST00000544293 SMDT1Q9H4I9 107 aa5.53□□□□□ -1.52
C2CD3-220ENST00000544293 ST20Q9HBF5 79 aa5.53□□□□□ -1.52
C2CD3-220ENST00000544293 MANBALQ9NQG1 85 aa5.53□□□□□ -1.52
C2CD3-220ENST00000544293 MED9Q9NWA0 146 aa5.53□□□□□ -1.52
C2CD3-220ENST00000544293 C7orf77A4D0Y5 90 aa5.52□□□□□ -1.53
C2CD3-220ENST00000544293 RAB4AP20338 218 aa5.52□□□□□ -1.53
C2CD3-220ENST00000544293 ZNF345Q14585 488 aa5.52□□□□□ -1.53
C2CD3-220ENST00000544293 GAGE2EQ4V326 116 aa5.52□□□□□ -1.53
C2CD3-220ENST00000544293 Q6ZUT4 128 aa5.52□□□□□ -1.53
C2CD3-220ENST00000544293 TSKUQ8WUA8 353 aa5.52□□□□□ -1.53
C2CD3-220ENST00000544293 RETNLBQ9BQ08 111 aa5.52□□□□□ -1.53
C2CD3-220ENST00000544293 GAGE2DQ9UEU5 116 aa5.52□□□□□ -1.53
C2CD3-220ENST00000544293 OR10D4PQ8NGN7 298 aa5.51□□□□□ -1.53
C2CD3-220ENST00000544293 FAM210AQ96ND0 272 aa5.51□□□□□ -1.53
C2CD3-220ENST00000544293 IMMP2LQ96T52 175 aa5.51□□□□□ -1.53
C2CD3-220ENST00000544293 SMKR1H3BMG3 65 aa5.5□□□□□ -1.53
C2CD3-220ENST00000544293 M0QXV9 152 aa5.5□□□□□ -1.53
C2CD3-220ENST00000544293 TMEM241Q24JQ0 296 aa5.5□□□□□ -1.53
C2CD3-220ENST00000544293 KRTAP13-2Q52LG2 175 aa5.5□□□□□ -1.53
C2CD3-220ENST00000544293 NRACQ8N912 160 aa5.5□□□□□ -1.53
C2CD3-220ENST00000544293 ORAOV1Q8WV07 137 aa5.5□□□□□ -1.53
C2CD3-220ENST00000544293 KRTAP4-1Q9BYQ7 146 aa5.5□□□□□ -1.53
C2CD3-220ENST00000544293 BIN3Q9NQY0 253 aa5.5□□□□□ -1.53
C2CD3-220ENST00000544293 ANAPC11Q9NYG5 84 aa5.5□□□□□ -1.53
C2CD3-220ENST00000544293 HMSDA8MTL9 139 aa5.49□□□□□ -1.53
C2CD3-220ENST00000544293 F8WDY8 70 aa5.49□□□□□ -1.53
C2CD3-220ENST00000544293 VCYO14598 125 aa5.49□□□□□ -1.53
C2CD3-220ENST00000544293 NDUFA1O15239 70 aa5.49□□□□□ -1.53
C2CD3-220ENST00000544293 PDE6DO43924 150 aa5.49□□□□□ -1.53
C2CD3-220ENST00000544293 AMN1Q8IY45 258 aa5.49□□□□□ -1.53
C2CD3-220ENST00000544293 TMEM191AQ9H0A3 160 aa5.49□□□□□ -1.53
C2CD3-220ENST00000544293 UBE2BP63146 152 aa5.48□□□□□ -1.53
C2CD3-220ENST00000544293 TPRXLQ17RH7 258 aa5.48□□□□□ -1.53
C2CD3-220ENST00000544293 SMIM15Q7Z3B0 74 aa5.48□□□□□ -1.53
C2CD3-220ENST00000544293 TIMM21Q9BVV7 248 aa5.48□□□□□ -1.53
C2CD3-220ENST00000544293 hCG_2014768A0A024R1R8 64 aa5.47□□□□□ -1.53
C2CD3-220ENST00000544293 RPL39P62891 51 aaKnown RBP5.47□□□□□ -1.53
C2CD3-220ENST00000544293 C2orf82Q6UX34 121 aa5.47□□□□□ -1.53
C2CD3-220ENST00000544293 FAM231DQ6ZW35 169 aa5.47□□□□□ -1.53
C2CD3-220ENST00000544293 CTDSP1Q9GZU7 261 aa5.47□□□□□ -1.53
C2CD3-220ENST00000544293 C22orf24Q9Y442 160 aa5.47□□□□□ -1.53
C2CD3-220ENST00000544293 C9orf118A6NHY6 69 aa5.46□□□□□ -1.54
C2CD3-220ENST00000544293 GATCO43716 136 aaKnown RBP5.46□□□□□ -1.54
C2CD3-220ENST00000544293 SUMO2P61956 95 aaKnown RBP5.46□□□□□ -1.54
C2CD3-220ENST00000544293 KRTAP19-4Q3LI73 84 aa5.46□□□□□ -1.54
C2CD3-220ENST00000544293 LINC00242Q5T6M2 205 aa5.46□□□□□ -1.54
C2CD3-220ENST00000544293 TYMSOSQ8TAI1 123 aa5.46□□□□□ -1.54
C2CD3-220ENST00000544293 KANTRA0A1W2PQU2 76 aa5.45□□□□□ -1.54
C2CD3-220ENST00000544293 NDUFC2-KCTD14E9PQ53 114 aa5.45□□□□□ -1.54
C2CD3-220ENST00000544293 CRYGAP11844 174 aa5.45□□□□□ -1.54
C2CD3-220ENST00000544293 IGLV7-46A0A075B6I9 117 aa5.44□□□□□ -1.54
C2CD3-220ENST00000544293 A0A1B0GUT8 65 aa5.44□□□□□ -1.54
C2CD3-220ENST00000544293 HIGD1CA8MV81 97 aa5.44□□□□□ -1.54
C2CD3-220ENST00000544293 A8MWL6 223 aa5.44□□□□□ -1.54
C2CD3-220ENST00000544293 FCER1GP30273 86 aa5.44□□□□□ -1.54
C2CD3-220ENST00000544293 CT83Q5H943 113 aa5.44□□□□□ -1.54
C2CD3-220ENST00000544293 KRTAP13-1Q8IUC0 172 aa5.44□□□□□ -1.54
C2CD3-220ENST00000544293 TRBV30A0A0K0K1B3 111 aa5.43□□□□□ -1.54
C2CD3-220ENST00000544293 NUPR1O60356 82 aa5.43□□□□□ -1.54
C2CD3-220ENST00000544293 MRPS36P82909 103 aaKnown RBP5.43□□□□□ -1.54
C2CD3-220ENST00000544293 MRPL51Q4U2R6 128 aaKnown RBP5.43□□□□□ -1.54
C2CD3-220ENST00000544293 TRBV24-1A0A075B6N3 115 aa5.42□□□□□ -1.54
C2CD3-220ENST00000544293 LINC00469Q8N7U9 141 aa5.42□□□□□ -1.54
C2CD3-220ENST00000544293 KIR2DL4Q99706 377 aa5.42□□□□□ -1.54
C2CD3-220ENST00000544293 ZNF727A8MUV8 499 aa5.41□□□□□ -1.54
C2CD3-220ENST00000544293 BCE1O60756 84 aa5.41□□□□□ -1.54
C2CD3-220ENST00000544293 RPL32P62910 135 aaKnown RBP5.41□□□□□ -1.54
C2CD3-220ENST00000544293 PPDPFQ9H3Y8 114 aa5.41□□□□□ -1.54
C2CD3-220ENST00000544293 XAGE1AQ9HD64 81 aa5.41□□□□□ -1.54
C2CD3-220ENST00000544293 SMAGPQ0VAQ4 97 aa5.4□□□□□ -1.54
C2CD3-220ENST00000544293 ASB16-AS1Q495Z4 193 aa5.4□□□□□ -1.54
C2CD3-220ENST00000544293 FAM104BQ5XKR9 115 aa5.4□□□□□ -1.54
C2CD3-220ENST00000544293 LINC00173Q6ZV60 143 aa5.4□□□□□ -1.54
C2CD3-220ENST00000544293 LINC00304Q8N9R0 145 aa5.4□□□□□ -1.54
C2CD3-220ENST00000544293 C20orf78Q9BR46 151 aa5.4□□□□□ -1.54
C2CD3-220ENST00000544293 SPANXA1Q9NS26 97 aa5.4□□□□□ -1.54
C2CD3-220ENST00000544293 V9GYV3 84 aa5.4□□□□□ -1.54
C2CD3-220ENST00000544293 IFITM10A6NMD0 228 aa5.39□□□□□ -1.55
C2CD3-220ENST00000544293 TEX46H3BTG2 121 aa5.39□□□□□ -1.55
C2CD3-220ENST00000544293 TCAPO15273 167 aa5.39□□□□□ -1.55
C2CD3-220ENST00000544293 RPL28P46779 137 aaKnown RBP5.39□□□□□ -1.55
C2CD3-220ENST00000544293 HBBP68871 147 aa5.39□□□□□ -1.55
C2CD3-220ENST00000544293 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
C2CD3-220ENST00000544293 ZC2HC1BQ5TFG8 222 aa5.39□□□□□ -1.55
C2CD3-220ENST00000544293 LINC01551Q86U37 167 aa5.39□□□□□ -1.55
C2CD3-220ENST00000544293 TMEM18Q96B42 140 aa5.39□□□□□ -1.55
C2CD3-220ENST00000544293 PACRGQ96M98 296 aaPredicted RBP5.39□□□□□ -1.55
C2CD3-220ENST00000544293 LINC00167Q96N53 147 aa5.39□□□□□ -1.55
C2CD3-220ENST00000544293 IGLV4-3A0A075B6K6 122 aa5.38□□□□□ -1.55
C2CD3-220ENST00000544293 RPL37AP8A6NKH3 93 aa5.38□□□□□ -1.55
C2CD3-220ENST00000544293 TMEM250H0YL14 139 aa5.38□□□□□ -1.55
C2CD3-220ENST00000544293 TNFRSF6BO95407 300 aa5.38□□□□□ -1.55
C2CD3-220ENST00000544293 PPP1R17O96001 155 aa5.38□□□□□ -1.55
C2CD3-220ENST00000544293 TAGLN2P37802 199 aaKnown RBP5.38□□□□□ -1.55
C2CD3-220ENST00000544293 LINC01547P58512 204 aaPredicted RBP5.38□□□□□ -1.55
C2CD3-220ENST00000544293 FAM229BQ4G0N7 80 aa5.38□□□□□ -1.55
C2CD3-220ENST00000544293 LBHQ53QV2 105 aaPredicted RBP5.38□□□□□ -1.55
C2CD3-220ENST00000544293 MRPL55Q7Z7F7 128 aaKnown RBP5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms