RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 ZNF625Q96I27 306 aaPredicted RBP9.46□□□□□ -0.9
HCFC2-202ENST00000544223 PTTG1IPP53801 180 aa9.45□□□□□ -0.9
HCFC2-202ENST00000544223 NPC2P61916 151 aa9.45□□□□□ -0.9
HCFC2-202ENST00000544223 C10orf126Q8N4M7 172 aa9.45□□□□□ -0.9
HCFC2-202ENST00000544223 NHP2Q9NX24 153 aaKnown RBP9.45□□□□□ -0.9
HCFC2-202ENST00000544223 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
HCFC2-202ENST00000544223 RBX1P62877 108 aa9.44□□□□□ -0.9
HCFC2-202ENST00000544223 IGLV10-54A0A075B6I4 117 aa9.44□□□□□ -0.9
HCFC2-202ENST00000544223 LEPROTO15243 131 aa9.44□□□□□ -0.9
HCFC2-202ENST00000544223 CEND1Q8N111 149 aa9.43□□□□□ -0.9
HCFC2-202ENST00000544223 DAND5Q8N907 189 aa9.43□□□□□ -0.9
HCFC2-202ENST00000544223 HIGD1BQ9P298 99 aa9.43□□□□□ -0.9
HCFC2-202ENST00000544223 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
HCFC2-202ENST00000544223 CSDC2Q9Y534 153 aaKnown RBP9.43□□□□□ -0.9
HCFC2-202ENST00000544223 IGHV1-58A0A0C4DH39 117 aa9.42□□□□□ -0.9
HCFC2-202ENST00000544223 XCL1P47992 114 aa9.42□□□□□ -0.9
HCFC2-202ENST00000544223 C5orf38Q86SI9 138 aa9.42□□□□□ -0.9
HCFC2-202ENST00000544223 LINC00269Q8N2A0 174 aa9.42□□□□□ -0.9
HCFC2-202ENST00000544223 COX11Q9Y6N1 276 aa9.42□□□□□ -0.9
HCFC2-202ENST00000544223 ADAMTSL4-AS1Q5T5F5 129 aa9.41□□□□□ -0.9
HCFC2-202ENST00000544223 C11orf68Q9H3H3 251 aaKnown RBP9.41□□□□□ -0.9
HCFC2-202ENST00000544223 SMIM1B2RUZ4 78 aa9.4□□□□□ -0.9
HCFC2-202ENST00000544223 NDUFA12Q9UI09 145 aa9.4□□□□□ -0.9
HCFC2-202ENST00000544223 EIF4EBP3O60516 100 aaPredicted RBP9.4□□□□□ -0.91
HCFC2-202ENST00000544223 KPRPQ5T749 579 aaPredicted RBP9.4□□□□□ -0.91
HCFC2-202ENST00000544223 SFTA2Q6UW10 78 aa9.4□□□□□ -0.91
HCFC2-202ENST00000544223 C11orf45Q8TAV5 145 aa9.4□□□□□ -0.91
HCFC2-202ENST00000544223 A0A0J9YXY3 114 aa9.39□□□□□ -0.91
HCFC2-202ENST00000544223 ANGP03950 147 aaKnown RBP9.39□□□□□ -0.91
HCFC2-202ENST00000544223 HERVK_113P63121 156 aa9.39□□□□□ -0.91
HCFC2-202ENST00000544223 TOMM7Q9P0U1 55 aa9.39□□□□□ -0.91
HCFC2-202ENST00000544223 H3BUT2 72 aa9.39□□□□□ -0.91
HCFC2-202ENST00000544223 CCL25O15444 150 aa9.39□□□□□ -0.91
HCFC2-202ENST00000544223 TIRAPP58753 221 aa9.39□□□□□ -0.91
HCFC2-202ENST00000544223 MRPL23Q16540 153 aaKnown RBP9.39□□□□□ -0.91
HCFC2-202ENST00000544223 ICOSQ9Y6W8 199 aa9.39□□□□□ -0.91
HCFC2-202ENST00000544223 IGLV5-45A0A087WSX0 123 aa9.38□□□□□ -0.91
HCFC2-202ENST00000544223 LINC00959A0A1B0GUT2 108 aa9.38□□□□□ -0.91
HCFC2-202ENST00000544223 IGHV3-30P01768 117 aa9.38□□□□□ -0.91
HCFC2-202ENST00000544223 IGHV3-33P01772 117 aa9.38□□□□□ -0.91
HCFC2-202ENST00000544223 IGHV3-30-5P0DP03 117 aa9.38□□□□□ -0.91
HCFC2-202ENST00000544223 SEC11AP67812 179 aa9.38□□□□□ -0.91
HCFC2-202ENST00000544223 UBE2V1Q13404 147 aa9.38□□□□□ -0.91
HCFC2-202ENST00000544223 TM2D2Q9BX73 214 aa9.38□□□□□ -0.91
HCFC2-202ENST00000544223 DEFB131BA0A096LNP1 70 aa9.37□□□□□ -0.91
HCFC2-202ENST00000544223 LYPD5Q6UWN5 251 aa9.37□□□□□ -0.91
HCFC2-202ENST00000544223 A6NDN8 102 aa9.37□□□□□ -0.91
HCFC2-202ENST00000544223 APOMO95445 188 aa9.37□□□□□ -0.91
HCFC2-202ENST00000544223 WFDC10BQ8IUB3 73 aa9.37□□□□□ -0.91
HCFC2-202ENST00000544223 Q9H8V8 135 aa9.37□□□□□ -0.91
HCFC2-202ENST00000544223 TGP01266 2768 aa9.37□□□□□ -0.91
HCFC2-202ENST00000544223 H3BRM9 83 aa9.36□□□□□ -0.91
HCFC2-202ENST00000544223 H7C423 109 aa9.36□□□□□ -0.91
HCFC2-202ENST00000544223 PRSS2P07478 247 aa9.36□□□□□ -0.91
HCFC2-202ENST00000544223 VAMP3Q15836 100 aa9.36□□□□□ -0.91
HCFC2-202ENST00000544223 SMIM13P0DJ93 91 aa9.35□□□□□ -0.91
HCFC2-202ENST00000544223 PCP4P48539 62 aa9.35□□□□□ -0.91
HCFC2-202ENST00000544223 MUSTN1Q8IVN3 82 aa9.35□□□□□ -0.91
HCFC2-202ENST00000544223 LITAFQ99732 161 aa9.35□□□□□ -0.91
HCFC2-202ENST00000544223 KLK12Q9UKR0 248 aa9.35□□□□□ -0.91
HCFC2-202ENST00000544223 DNAH10Q8IVF4 4471 aa9.35□□□□□ -0.91
HCFC2-202ENST00000544223 IGHV3OR16-9A0A0B4J2B5 98 aa9.35□□□□□ -0.91
HCFC2-202ENST00000544223 IGLV5-39A0A0G2JS06 123 aa9.34□□□□□ -0.91
HCFC2-202ENST00000544223 TM2D3Q9BRN9 247 aa9.34□□□□□ -0.91
HCFC2-202ENST00000544223 ESRGQ1W209 222 aa9.34□□□□□ -0.91
HCFC2-202ENST00000544223 ZFAND6Q6FIF0 208 aa9.34□□□□□ -0.91
HCFC2-202ENST00000544223 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
HCFC2-202ENST00000544223 REG3AQ06141 175 aa9.33□□□□□ -0.92
HCFC2-202ENST00000544223 FAM19A3Q7Z5A8 133 aa9.33□□□□□ -0.92
HCFC2-202ENST00000544223 LINC00526Q96FQ7 95 aa9.33□□□□□ -0.92
HCFC2-202ENST00000544223 PLECQ15149 4684 aaKnown RBP9.33□□□□□ -0.92
HCFC2-202ENST00000544223 A0A1B0GUV1 79 aa9.33□□□□□ -0.92
HCFC2-202ENST00000544223 SMAGPQ0VAQ4 97 aa9.32□□□□□ -0.92
HCFC2-202ENST00000544223 A4D1N5 150 aa9.32□□□□□ -0.92
HCFC2-202ENST00000544223 H7C2G1 150 aa9.32□□□□□ -0.92
HCFC2-202ENST00000544223 LELP1Q5T871 98 aa9.32□□□□□ -0.92
HCFC2-202ENST00000544223 C9orf118A6NHY6 69 aa9.31□□□□□ -0.92
HCFC2-202ENST00000544223 C2orf82Q6UX34 121 aa9.31□□□□□ -0.92
HCFC2-202ENST00000544223 TAL2Q16559 108 aa9.31□□□□□ -0.92
HCFC2-202ENST00000544223 CHCHD10Q8WYQ3 142 aaPredicted RBP9.31□□□□□ -0.92
HCFC2-202ENST00000544223 CFC1BP0CG36 223 aa9.3□□□□□ -0.92
HCFC2-202ENST00000544223 CFC1P0CG37 223 aa9.3□□□□□ -0.92
HCFC2-202ENST00000544223 STARD9Q9P2P6 4700 aa9.3□□□□□ -0.92
HCFC2-202ENST00000544223 TEX48A0A1B0GUV7 120 aa9.3□□□□□ -0.92
HCFC2-202ENST00000544223 NDUFA1O15239 70 aa9.3□□□□□ -0.92
HCFC2-202ENST00000544223 SS18Q15532 418 aa9.3□□□□□ -0.92
HCFC2-202ENST00000544223 COX7B2Q8TF08 81 aa9.29□□□□□ -0.92
HCFC2-202ENST00000544223 ENHOQ6UWT2 76 aa9.29□□□□□ -0.92
HCFC2-202ENST00000544223 UBE2WQ96B02 151 aa9.29□□□□□ -0.92
HCFC2-202ENST00000544223 SPANXB1Q9NS25 103 aaPredicted RBP9.29□□□□□ -0.92
HCFC2-202ENST00000544223 PGPEP1Q9NXJ5 209 aa9.29□□□□□ -0.92
HCFC2-202ENST00000544223 A0A087WZ39 114 aa9.28□□□□□ -0.92
HCFC2-202ENST00000544223 IGLL5B9A064 214 aa9.28□□□□□ -0.92
HCFC2-202ENST00000544223 MEIG1Q5JSS6 88 aa9.28□□□□□ -0.92
HCFC2-202ENST00000544223 TMEM238C9JI98 176 aa9.28□□□□□ -0.92
HCFC2-202ENST00000544223 DNAH1Q9P2D7 4330 aa9.28□□□□□ -0.92
HCFC2-202ENST00000544223 A0A1W2PPM0 123 aa9.27□□□□□ -0.93
HCFC2-202ENST00000544223 PFN2P35080 140 aa9.27□□□□□ -0.93
HCFC2-202ENST00000544223 MTURNQ8N3F0 131 aa9.27□□□□□ -0.93
HCFC2-202ENST00000544223 SOSTDC1Q6X4U4 206 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms