RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 IMMP2LQ96T52 175 aa4.51□□□□□ -1.69
NUP43-206ENST00000543637 PLA2G2DQ9UNK4 145 aa4.51□□□□□ -1.69
NUP43-206ENST00000543637 SRRM2Q9UQ35 2752 aaKnown RBP4.5□□□□□ -1.69
NUP43-206ENST00000543637 TGIF2-C20orf24A0A0A6YYL0 155 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 LOC389332A0A1B0GUA5 103 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 IFITM10A6NMD0 228 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 NDUFA1O15239 70 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 NPYP01303 97 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 G0S2P27469 103 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 PTTG1IPP53801 180 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 MRPS36P82909 103 aaKnown RBP4.5□□□□□ -1.69
NUP43-206ENST00000543637 RPL18AQ02543 176 aaKnown RBP4.5□□□□□ -1.69
NUP43-206ENST00000543637 RNF151Q2KHN1 245 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 REG3GQ6UW15 175 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 SPINK6Q6UWN8 80 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 Q6ZUT4 128 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 ORAOV1Q8WV07 137 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 MAP1LC3AQ9H492 121 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 LAMTOR2Q9Y2Q5 125 aa4.5□□□□□ -1.69
NUP43-206ENST00000543637 A0A1B0GXF2 115 aa4.49□□□□□ -1.69
NUP43-206ENST00000543637 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
NUP43-206ENST00000543637 SPAG11BQ08648 103 aa4.49□□□□□ -1.69
NUP43-206ENST00000543637 Q6ZN92 141 aa4.49□□□□□ -1.69
NUP43-206ENST00000543637 TEX43Q6ZNM6 134 aa4.49□□□□□ -1.69
NUP43-206ENST00000543637 PYGO1Q9Y3Y4 419 aa4.49□□□□□ -1.69
NUP43-206ENST00000543637 FLG2Q5D862 2391 aaPredicted RBP4.49□□□□□ -1.69
NUP43-206ENST00000543637 IGHV3OR16-9A0A0B4J2B5 98 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 PRSS47A8MTI9 375 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 MT-ND6P03923 174 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 PRR3P79522 188 aaKnown RBP4.48□□□□□ -1.69
NUP43-206ENST00000543637 ORMDL2Q53FV1 153 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 TMEM141Q96I45 108 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 OPRPNQ99935 248 aaPredicted RBP4.48□□□□□ -1.69
NUP43-206ENST00000543637 C2orf88Q9BSF0 95 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 KRTAP9-2Q9BYQ4 174 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 CTDSP1Q9GZU7 261 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 VCX2Q9H322 139 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 CYSLTR1Q9Y271 337 aa4.48□□□□□ -1.69
NUP43-206ENST00000543637 A0A0J9YXV3 536 aa4.47□□□□□ -1.69
NUP43-206ENST00000543637 K7EMI3 77 aa4.47□□□□□ -1.69
NUP43-206ENST00000543637 PRSS2P07478 247 aa4.47□□□□□ -1.69
NUP43-206ENST00000543637 C9orf116Q5BN46 136 aaPredicted RBP4.47□□□□□ -1.69
NUP43-206ENST00000543637 PAPPA-AS1Q5QFB9 102 aa4.47□□□□□ -1.69
NUP43-206ENST00000543637 Q8N8P6 123 aa4.47□□□□□ -1.69
NUP43-206ENST00000543637 PACRGQ96M98 296 aaPredicted RBP4.47□□□□□ -1.69
NUP43-206ENST00000543637 LINC01600Q96MT4 127 aa4.47□□□□□ -1.69
NUP43-206ENST00000543637 NXT2Q9NPJ8 142 aaKnown RBP4.47□□□□□ -1.69
NUP43-206ENST00000543637 MRPL35Q9NZE8 188 aaKnown RBP4.47□□□□□ -1.69
NUP43-206ENST00000543637 VPS13BQ7Z7G8 4022 aa4.47□□□□□ -1.69
NUP43-206ENST00000543637 FAT1Q14517 4588 aa4.46□□□□□ -1.7
NUP43-206ENST00000543637 DNAH8Q96JB1 4490 aa4.46□□□□□ -1.7
NUP43-206ENST00000543637 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
NUP43-206ENST00000543637 A0A1W2PNN7 141 aa4.46□□□□□ -1.7
NUP43-206ENST00000543637 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.46□□□□□ -1.7
NUP43-206ENST00000543637 S100PP25815 95 aa4.46□□□□□ -1.7
NUP43-206ENST00000543637 SEC11AP67812 179 aa4.46□□□□□ -1.7
NUP43-206ENST00000543637 C6orf226Q5I0X4 101 aa4.46□□□□□ -1.7
NUP43-206ENST00000543637 C2orf66Q6UXQ4 117 aa4.46□□□□□ -1.7
NUP43-206ENST00000543637 IGLV4-3A0A075B6K6 122 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 A0A087WZ39 114 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 TRBV30A0A0K0K1B3 111 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 LINC01549A6NIU2 74 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 NPSP0C0P6 89 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 CKS1BP61024 79 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 SRSF9Q13242 221 aaKnown RBP eCLIP4.45□□□□□ -1.7
NUP43-206ENST00000543637 GAGE2EQ4V326 116 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 C1orf137Q5JT78 98 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 CLLU1Q5K131 121 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 LINC00242Q5T6M2 205 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 UNQ6190/PRO20217Q6UXQ8 127 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 LINC01561Q8N1V8 128 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 TOMM7Q9P0U1 55 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 GAGE2DQ9UEU5 116 aa4.45□□□□□ -1.7
NUP43-206ENST00000543637 DMBT1Q9UGM3 2413 aaPredicted RBP4.44□□□□□ -1.7
NUP43-206ENST00000543637 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
NUP43-206ENST00000543637 UBE2D1P51668 147 aa4.44□□□□□ -1.7
NUP43-206ENST00000543637 UQCC3Q6UW78 93 aa4.44□□□□□ -1.7
NUP43-206ENST00000543637 PHF5AQ7RTV0 110 aaKnown RBP4.44□□□□□ -1.7
NUP43-206ENST00000543637 FAM104AQ969W3 186 aa4.44□□□□□ -1.7
NUP43-206ENST00000543637 GEMIN7Q9H840 131 aaKnown RBP4.44□□□□□ -1.7
NUP43-206ENST00000543637 PSORS1C2Q9UIG4 136 aa4.44□□□□□ -1.7
NUP43-206ENST00000543637 TRAV9-1A0A075B6T8 112 aa4.43□□□□□ -1.7
NUP43-206ENST00000543637 HERVK_113P63121 156 aa4.43□□□□□ -1.7
NUP43-206ENST00000543637 UBE2BP63146 152 aa4.43□□□□□ -1.7
NUP43-206ENST00000543637 COX19Q49B96 90 aa4.43□□□□□ -1.7
NUP43-206ENST00000543637 C10orf25Q5T742 122 aa4.43□□□□□ -1.7
NUP43-206ENST00000543637 SCGB3A1Q96QR1 104 aa4.43□□□□□ -1.7
NUP43-206ENST00000543637 ALKBH7Q9BT30 221 aaPredicted RBP4.43□□□□□ -1.7
NUP43-206ENST00000543637 C6orf48Q9UBA6 75 aa4.43□□□□□ -1.7
NUP43-206ENST00000543637 TMEM218A2RU14 115 aa4.42□□□□□ -1.7
NUP43-206ENST00000543637 NDUFC2-KCTD14E9PQ53 114 aa4.42□□□□□ -1.7
NUP43-206ENST00000543637 KIAA0087Q14695 138 aa4.42□□□□□ -1.7
NUP43-206ENST00000543637 KIAA1644Q3SXP7 199 aa4.42□□□□□ -1.7
NUP43-206ENST00000543637 C2orf82Q6UX34 121 aa4.42□□□□□ -1.7
NUP43-206ENST00000543637 ERASQ7Z444 233 aa4.42□□□□□ -1.7
NUP43-206ENST00000543637 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
NUP43-206ENST00000543637 DIRC1Q969H9 104 aa4.42□□□□□ -1.7
NUP43-206ENST00000543637 AMELXQ99217 191 aa4.42□□□□□ -1.7
NUP43-206ENST00000543637 SMCO4Q9NRQ5 59 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms