RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 HIST1H2BDP58876 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 KRTAP10-2P60368 255 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST1H2BCP62807 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 PMVKQ15126 192 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST2H2BEQ16778 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.16□□□□□ -1.74
LTBR-212ENST00000543542 CDPF1Q6NVV7 123 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 KRTAP26-1Q6PEX3 210 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 NTN5Q8WTR8 489 aaPredicted RBP4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST1H2BHQ93079 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 AMELXQ99217 191 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST1H2BNQ99877 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 HIST1H2BMQ99879 126 aa4.16□□□□□ -1.74
LTBR-212ENST00000543542 A0A096LNJ9 63 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.15□□□□□ -1.75
LTBR-212ENST00000543542 A0A0J9YXV3 536 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 GCSHP23434 173 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 HERVK_113P63121 156 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 PDZD11Q5EBL8 140 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 LINC00242Q5T6M2 205 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 LINC00173Q6ZV60 143 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 FAM104AQ969W3 186 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 IFI27L1Q96BM0 104 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 PACRGQ96M98 296 aaPredicted RBP4.15□□□□□ -1.75
LTBR-212ENST00000543542 CST9LQ9H4G1 147 aa4.15□□□□□ -1.75
LTBR-212ENST00000543542 DNAH11Q96DT5 4516 aa4.14□□□□□ -1.75
LTBR-212ENST00000543542 PRSS2P07478 247 aa4.14□□□□□ -1.75
LTBR-212ENST00000543542 COX6A2Q02221 97 aa4.14□□□□□ -1.75
LTBR-212ENST00000543542 LINC00469Q8N7U9 141 aa4.14□□□□□ -1.75
LTBR-212ENST00000543542 C15orf56Q8N910 161 aa4.14□□□□□ -1.75
LTBR-212ENST00000543542 ORAOV1Q8WV07 137 aa4.14□□□□□ -1.75
LTBR-212ENST00000543542 TOMM7Q9P0U1 55 aa4.14□□□□□ -1.75
LTBR-212ENST00000543542 HSPB8Q9UJY1 196 aa4.14□□□□□ -1.75
LTBR-212ENST00000543542 CHTOPQ9Y3Y2 248 aaKnown RBP4.14□□□□□ -1.75
LTBR-212ENST00000543542 EPPK1P58107 5090 aaKnown RBP4.14□□□□□ -1.75
LTBR-212ENST00000543542 IGLV4-69A0A075B6H9 119 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 GVQW2A0A096LPI5 108 aaPredicted RBP4.13□□□□□ -1.75
LTBR-212ENST00000543542 IGHV3OR16-9A0A0B4J2B5 98 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 TINCRA0A1B0GVN0 87 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 H3BRM9 83 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 NUPR1O60356 82 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 S100A6P06703 90 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 SPAG11BQ08648 103 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 OR10D4PQ8NGN7 298 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 LINC00526Q96FQ7 95 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 CAMK2N2Q96S95 79 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 CHAC1Q9BUX1 264 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 MAP1LC3CQ9BXW4 147 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 HECTD4Q9Y4D8 3996 aa4.13□□□□□ -1.75
LTBR-212ENST00000543542 IGHV3-64A0A075B6Q5 118 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 A0A087WZ39 114 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 LINC00310P59036 64 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 SYCNQ0VAF6 134 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 LINC01620Q4KN68 170 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 C6orf226Q5I0X4 101 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 TMEM170BQ5T4T1 132 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 FAM19A3Q7Z5A8 133 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 DPH3Q96FX2 82 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 CARD19Q96LW7 228 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 CDKN2A-AS1Q9UH64 79 aa4.12□□□□□ -1.75
LTBR-212ENST00000543542 TRAV12-1A0A0B4J245 112 aa4.11□□□□□ -1.75
LTBR-212ENST00000543542 NDUFA1O15239 70 aa4.11□□□□□ -1.75
LTBR-212ENST00000543542 SPINK8P0C7L1 97 aa4.11□□□□□ -1.75
LTBR-212ENST00000543542 IGLC3P0DOY3 106 aa4.11□□□□□ -1.75
LTBR-212ENST00000543542 S100A2P29034 98 aa4.11□□□□□ -1.75
LTBR-212ENST00000543542 CKS1BP61024 79 aa4.11□□□□□ -1.75
LTBR-212ENST00000543542 CNBPP62633 177 aaKnown RBP4.11□□□□□ -1.75
LTBR-212ENST00000543542 LINC01561Q8N1V8 128 aa4.11□□□□□ -1.75
LTBR-212ENST00000543542 PKIGQ9Y2B9 76 aa4.11□□□□□ -1.75
LTBR-212ENST00000543542 C11orf86A6NJI1 115 aa4.1□□□□□ -1.75
LTBR-212ENST00000543542 F8VRH5 84 aa4.1□□□□□ -1.75
LTBR-212ENST00000543542 ZNF22P17026 224 aaPredicted RBP4.1□□□□□ -1.75
LTBR-212ENST00000543542 KRTAP10-1P60331 282 aa4.1□□□□□ -1.75
LTBR-212ENST00000543542 Q6ZRU5 148 aa4.1□□□□□ -1.75
LTBR-212ENST00000543542 C9orf163Q8N9P6 203 aa4.1□□□□□ -1.75
LTBR-212ENST00000543542 COX7B2Q8TF08 81 aa4.1□□□□□ -1.75
LTBR-212ENST00000543542 C2orf48Q96LS8 159 aa4.1□□□□□ -1.75
LTBR-212ENST00000543542 MRPL35Q9NZE8 188 aaKnown RBP4.1□□□□□ -1.75
LTBR-212ENST00000543542 DYNC1H1Q14204 4646 aaKnown RBP4.09□□□□□ -1.75
LTBR-212ENST00000543542 IGKV2-24A0A0C4DH68 120 aa4.09□□□□□ -1.75
LTBR-212ENST00000543542 SMIM1B2RUZ4 78 aa4.09□□□□□ -1.75
LTBR-212ENST00000543542 F8WDY8 70 aa4.09□□□□□ -1.75
LTBR-212ENST00000543542 DPM2O94777 84 aa4.09□□□□□ -1.75
LTBR-212ENST00000543542 SLPIP03973 132 aa4.09□□□□□ -1.75
LTBR-212ENST00000543542 PLNP26678 52 aa4.09□□□□□ -1.75
LTBR-212ENST00000543542 KRTDAPP60985 99 aa4.09□□□□□ -1.75
LTBR-212ENST00000543542 RPL18AQ02543 176 aaKnown RBP4.09□□□□□ -1.75
LTBR-212ENST00000543542 COA6Q5JTJ3 125 aaKnown RBP4.09□□□□□ -1.75
LTBR-212ENST00000543542 Q8IZM0 81 aa4.09□□□□□ -1.75
LTBR-212ENST00000543542 PMCHL2Q9BQD1 86 aa4.09□□□□□ -1.75
LTBR-212ENST00000543542 DNAH5Q8TE73 4624 aa4.09□□□□□ -1.76
LTBR-212ENST00000543542 IGLV5-45A0A087WSX0 123 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 LOC107984640A0A0U1RRK4 108 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 C20orf202A1L168 122 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 SYS1-DBNDD2H3BUS1 97 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 IGKCP01834 107 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 PKHD1P08F94 4074 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 CXCL5P42830 114 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 HERVK_113P61574 105 aa4.08□□□□□ -1.76
LTBR-212ENST00000543542 GAGE2BQ13066 116 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms