RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 PPDPFLQ8WWR9 84 aa6.56□□□□□ -1.36
GNE-206ENST00000543356 TIMM21Q9BVV7 248 aa6.56□□□□□ -1.36
GNE-206ENST00000543356 C11orf68Q9H3H3 251 aaKnown RBP6.56□□□□□ -1.36
GNE-206ENST00000543356 UBE2D4Q9Y2X8 147 aa6.56□□□□□ -1.36
GNE-206ENST00000543356 FAM19A5Q7Z5A7 132 aaPredicted RBP6.55□□□□□ -1.36
GNE-206ENST00000543356 SBSPONQ8IVN8 264 aa6.55□□□□□ -1.36
GNE-206ENST00000543356 RETNQ9HD89 108 aa6.55□□□□□ -1.36
GNE-206ENST00000543356 COL6A5A8TX70 2615 aa6.55□□□□□ -1.36
GNE-206ENST00000543356 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.55□□□□□ -1.36
GNE-206ENST00000543356 IGKV2-29A2NJV5 120 aaPredicted RBP6.55□□□□□ -1.36
GNE-206ENST00000543356 ATP5G1P05496 136 aa6.55□□□□□ -1.36
GNE-206ENST00000543356 NTM-AS1Q6ZSK4 140 aa6.55□□□□□ -1.36
GNE-206ENST00000543356 HIGD1BQ9P298 99 aa6.55□□□□□ -1.36
GNE-206ENST00000543356 PKD1L1Q8TDX9 2849 aa6.55□□□□□ -1.36
GNE-206ENST00000543356 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
GNE-206ENST00000543356 AMELXQ99217 191 aa6.54□□□□□ -1.36
GNE-206ENST00000543356 TMEM126AQ9H061 195 aa6.54□□□□□ -1.36
GNE-206ENST00000543356 IGLV4-69A0A075B6H9 119 aa6.54□□□□□ -1.36
GNE-206ENST00000543356 GYPEP15421 78 aa6.54□□□□□ -1.36
GNE-206ENST00000543356 MRPS36P82909 103 aaKnown RBP6.54□□□□□ -1.36
GNE-206ENST00000543356 TRBV25-1A0A075B6N4 114 aa6.53□□□□□ -1.36
GNE-206ENST00000543356 H7C423 109 aa6.53□□□□□ -1.36
GNE-206ENST00000543356 K7EIL1 84 aa6.53□□□□□ -1.36
GNE-206ENST00000543356 ZC2HC1BQ5TFG8 222 aa6.53□□□□□ -1.36
GNE-206ENST00000543356 TEN1Q86WV5 123 aa6.53□□□□□ -1.36
GNE-206ENST00000543356 OPRPNQ99935 248 aaPredicted RBP6.53□□□□□ -1.36
GNE-206ENST00000543356 F5H768 121 aa6.53□□□□□ -1.36
GNE-206ENST00000543356 PAX4O43316 350 aa6.53□□□□□ -1.36
GNE-206ENST00000543356 TMEM243Q9BU79 118 aa6.53□□□□□ -1.36
GNE-206ENST00000543356 SNCGO76070 127 aa6.52□□□□□ -1.37
GNE-206ENST00000543356 CEMP1Q6PRD7 247 aaPredicted RBP6.52□□□□□ -1.37
GNE-206ENST00000543356 VSIG2Q96IQ7 327 aa6.52□□□□□ -1.37
GNE-206ENST00000543356 TRBV6-8A0A0A6YYG3 113 aa6.51□□□□□ -1.37
GNE-206ENST00000543356 C11orf86A6NJI1 115 aa6.51□□□□□ -1.37
GNE-206ENST00000543356 TMEM101Q96IK0 257 aa6.51□□□□□ -1.37
GNE-206ENST00000543356 UBE2L6O14933 153 aa6.51□□□□□ -1.37
GNE-206ENST00000543356 SFTA2Q6UW10 78 aa6.51□□□□□ -1.37
GNE-206ENST00000543356 TM2D3Q9BRN9 247 aa6.51□□□□□ -1.37
GNE-206ENST00000543356 A0A0U1RRA0 63 aa6.5□□□□□ -1.37
GNE-206ENST00000543356 C9JAW5 83 aa6.5□□□□□ -1.37
GNE-206ENST00000543356 PRB2P02812 416 aaPredicted RBP6.5□□□□□ -1.37
GNE-206ENST00000543356 DGAT2L7PQ6IED9 249 aa6.5□□□□□ -1.37
GNE-206ENST00000543356 Q6Q795 121 aa6.5□□□□□ -1.37
GNE-206ENST00000543356 ANKRD29Q8N6D5 301 aa6.5□□□□□ -1.37
GNE-206ENST00000543356 CHCHD5Q9BSY4 110 aa6.5□□□□□ -1.37
GNE-206ENST00000543356 TMEM262E9PQX1 116 aa6.49□□□□□ -1.37
GNE-206ENST00000543356 PSMB2P49721 201 aa6.49□□□□□ -1.37
GNE-206ENST00000543356 KLK5Q9Y337 293 aaPredicted RBP6.49□□□□□ -1.37
GNE-206ENST00000543356 NBEAL2Q6ZNJ1 2754 aa6.49□□□□□ -1.37
GNE-206ENST00000543356 A0A0J9YWU9 116 aa6.49□□□□□ -1.37
GNE-206ENST00000543356 A0A0J9YY99 117 aa6.49□□□□□ -1.37
GNE-206ENST00000543356 HERVK_113P61574 105 aa6.49□□□□□ -1.37
GNE-206ENST00000543356 MAPKAPK5-AS1Q8N8E1 139 aa6.49□□□□□ -1.37
GNE-206ENST00000543356 MRAPQ8TCY5 172 aa6.49□□□□□ -1.37
GNE-206ENST00000543356 A0A0J9YXV3 536 aa6.48□□□□□ -1.37
GNE-206ENST00000543356 TINCRA0A1B0GVN0 87 aa6.48□□□□□ -1.37
GNE-206ENST00000543356 HTN3P15516 51 aa6.48□□□□□ -1.37
GNE-206ENST00000543356 UBE2D1P51668 147 aa6.48□□□□□ -1.37
GNE-206ENST00000543356 RNASE13Q5GAN3 156 aaKnown RBP6.48□□□□□ -1.37
GNE-206ENST00000543356 FAM19A3Q7Z5A8 133 aa6.48□□□□□ -1.37
GNE-206ENST00000543356 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
GNE-206ENST00000543356 ICOSQ9Y6W8 199 aa6.48□□□□□ -1.37
GNE-206ENST00000543356 H3BNG1 76 aa6.48□□□□□ -1.37
GNE-206ENST00000543356 ZNF22P17026 224 aaPredicted RBP6.48□□□□□ -1.37
GNE-206ENST00000543356 J3KT08 172 aa6.47□□□□□ -1.37
GNE-206ENST00000543356 DEFB121Q5J5C9 76 aa6.47□□□□□ -1.37
GNE-206ENST00000543356 TMEM170BQ5T4T1 132 aa6.47□□□□□ -1.37
GNE-206ENST00000543356 TMEM223A0PJW6 202 aa6.47□□□□□ -1.37
GNE-206ENST00000543356 SRSF9Q13242 221 aaKnown RBP eCLIP6.46□□□□□ -1.38
GNE-206ENST00000543356 Q6ZTC4 211 aa6.46□□□□□ -1.38
GNE-206ENST00000543356 C11orf45Q8TAV5 145 aa6.46□□□□□ -1.38
GNE-206ENST00000543356 IGLV5-45A0A087WSX0 123 aa6.46□□□□□ -1.38
GNE-206ENST00000543356 HERVK_113P63121 156 aa6.46□□□□□ -1.38
GNE-206ENST00000543356 C15orf53Q8NAA6 179 aa6.46□□□□□ -1.38
GNE-206ENST00000543356 A0A096LPF7 62 aa6.45□□□□□ -1.38
GNE-206ENST00000543356 LOC107984156A0A0G2JMH3 177 aa6.45□□□□□ -1.38
GNE-206ENST00000543356 TCL1BO95988 128 aa6.45□□□□□ -1.38
GNE-206ENST00000543356 ARL17AQ8IVW1 177 aa6.45□□□□□ -1.38
GNE-206ENST00000543356 HIST1H4GQ99525 98 aa6.45□□□□□ -1.38
GNE-206ENST00000543356 A0A1B0GUV1 79 aa6.45□□□□□ -1.38
GNE-206ENST00000543356 TAL2Q16559 108 aa6.45□□□□□ -1.38
GNE-206ENST00000543356 LEPROTO15243 131 aa6.44□□□□□ -1.38
GNE-206ENST00000543356 NANOS2P60321 138 aaKnown RBP6.44□□□□□ -1.38
GNE-206ENST00000543356 OR13C6PQ8NH95 151 aa6.44□□□□□ -1.38
GNE-206ENST00000543356 IGLV4-60A0A075B6I1 120 aa6.44□□□□□ -1.38
GNE-206ENST00000543356 MYMXA0A1B0GTQ4 84 aa6.44□□□□□ -1.38
GNE-206ENST00000543356 C4orf26Q17RF5 130 aa6.44□□□□□ -1.38
GNE-206ENST00000543356 LINC00242Q5T6M2 205 aa6.44□□□□□ -1.38
GNE-206ENST00000543356 LELP1Q5T871 98 aa6.44□□□□□ -1.38
GNE-206ENST00000543356 A0A1B0GX51 115 aa6.43□□□□□ -1.38
GNE-206ENST00000543356 C4orf48Q5BLP8 95 aa6.43□□□□□ -1.38
GNE-206ENST00000543356 KRTAP21-3Q3LHN1 58 aa6.43□□□□□ -1.38
GNE-206ENST00000543356 PLEKHB2Q96CS7 222 aa6.43□□□□□ -1.38
GNE-206ENST00000543356 DEFB131BA0A096LNP1 70 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 J3QQQ9 107 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 TSPEAR-AS2P59090 65 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 C9orf153Q5TBE3 101 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 HRCT1Q6UXD1 115 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 TRAV13-1A0A0B4J241 112 aa6.42□□□□□ -1.38
GNE-206ENST00000543356 IGHV1-58A0A0C4DH39 117 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 155.2 ms