RNA–Protein interactions for RNA: ENST00000543239.1

CIT-212, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-212ENST00000543239 PKIGQ9Y2B9 76 aa10.4□□□□□ -0.74
CIT-212ENST00000543239 IGHV3OR16-9A0A0B4J2B5 98 aa10.39□□□□□ -0.75
CIT-212ENST00000543239 TEX43Q6ZNM6 134 aa10.39□□□□□ -0.75
CIT-212ENST00000543239 C5orf38Q86SI9 138 aa10.39□□□□□ -0.75
CIT-212ENST00000543239 ALKBH7Q9BT30 221 aaPredicted RBP10.39□□□□□ -0.75
CIT-212ENST00000543239 SRRM2Q9UQ35 2752 aaKnown RBP10.39□□□□□ -0.75
CIT-212ENST00000543239 VPS13BQ7Z7G8 4022 aa10.39□□□□□ -0.75
CIT-212ENST00000543239 COX6A2Q02221 97 aa10.38□□□□□ -0.75
CIT-212ENST00000543239 Q6ZN92 141 aa10.38□□□□□ -0.75
CIT-212ENST00000543239 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
CIT-212ENST00000543239 LINC00526Q96FQ7 95 aa10.38□□□□□ -0.75
CIT-212ENST00000543239 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
CIT-212ENST00000543239 MRPL18Q9H0U6 180 aaKnown RBP10.38□□□□□ -0.75
CIT-212ENST00000543239 SYCNQ0VAF6 134 aa10.37□□□□□ -0.75
CIT-212ENST00000543239 FABP9Q0Z7S8 132 aa10.37□□□□□ -0.75
CIT-212ENST00000543239 OR10D4PQ8NGN7 298 aa10.37□□□□□ -0.75
CIT-212ENST00000543239 PRSS3P2Q8NHM4 247 aa10.37□□□□□ -0.75
CIT-212ENST00000543239 C2orf48Q96LS8 159 aa10.37□□□□□ -0.75
CIT-212ENST00000543239 IGLV4-69A0A075B6H9 119 aa10.36□□□□□ -0.75
CIT-212ENST00000543239 TGIF2-C20orf24A0A0A6YYL0 155 aa10.36□□□□□ -0.75
CIT-212ENST00000543239 LINC01546A6NGU7 62 aa10.36□□□□□ -0.75
CIT-212ENST00000543239 IGIPA6NJ69 53 aa10.36□□□□□ -0.75
CIT-212ENST00000543239 PAPPA-AS1Q5QFB9 102 aa10.36□□□□□ -0.75
CIT-212ENST00000543239 TOMM6Q96B49 74 aa10.36□□□□□ -0.75
CIT-212ENST00000543239 AMELXQ99217 191 aa10.36□□□□□ -0.75
CIT-212ENST00000543239 C2orf88Q9BSF0 95 aa10.36□□□□□ -0.75
CIT-212ENST00000543239 LINC01549A6NIU2 74 aa10.35□□□□□ -0.75
CIT-212ENST00000543239 CHTF8P0CG12 524 aa10.35□□□□□ -0.75
CIT-212ENST00000543239 UBE2D1P51668 147 aa10.35□□□□□ -0.75
CIT-212ENST00000543239 LINC00242Q5T6M2 205 aa10.35□□□□□ -0.75
CIT-212ENST00000543239 LINC00173Q6ZV60 143 aa10.35□□□□□ -0.75
CIT-212ENST00000543239 TIMM17AQ99595 171 aa10.35□□□□□ -0.75
CIT-212ENST00000543239 VCX2Q9H322 139 aa10.35□□□□□ -0.75
CIT-212ENST00000543239 SPAG11BQ08648 103 aa10.34□□□□□ -0.75
CIT-212ENST00000543239 DPH3Q96FX2 82 aa10.34□□□□□ -0.75
CIT-212ENST00000543239 CAMK2N2Q96S95 79 aa10.34□□□□□ -0.75
CIT-212ENST00000543239 A0A087WYN8 130 aa10.33□□□□□ -0.76
CIT-212ENST00000543239 A0A087WZ39 114 aa10.33□□□□□ -0.76
CIT-212ENST00000543239 F8WDY8 70 aa10.33□□□□□ -0.76
CIT-212ENST00000543239 Q6ZRU5 148 aa10.33□□□□□ -0.76
CIT-212ENST00000543239 ORAOV1Q8WV07 137 aa10.33□□□□□ -0.76
CIT-212ENST00000543239 PLAC8Q9NZF1 115 aa10.33□□□□□ -0.76
CIT-212ENST00000543239 LINC00474Q9P2X8 69 aa10.33□□□□□ -0.76
CIT-212ENST00000543239 TRAPPC1Q9Y5R8 145 aa10.33□□□□□ -0.76
CIT-212ENST00000543239 A0A096LNI7 61 aa10.32□□□□□ -0.76
CIT-212ENST00000543239 KRTAP10-4P60372 401 aaPredicted RBP10.32□□□□□ -0.76
CIT-212ENST00000543239 ERASQ7Z444 233 aa10.32□□□□□ -0.76
CIT-212ENST00000543239 FAM19A3Q7Z5A8 133 aa10.32□□□□□ -0.76
CIT-212ENST00000543239 IGKV2-24A0A0C4DH68 120 aa10.31□□□□□ -0.76
CIT-212ENST00000543239 MAJINQ3KP22 176 aa10.31□□□□□ -0.76
CIT-212ENST00000543239 FA2HQ7L5A8 372 aa10.31□□□□□ -0.76
CIT-212ENST00000543239 LINC01561Q8N1V8 128 aa10.31□□□□□ -0.76
CIT-212ENST00000543239 SMCO4Q9NRQ5 59 aa10.31□□□□□ -0.76
CIT-212ENST00000543239 LOC107984640A0A0U1RRK4 108 aa10.3□□□□□ -0.76
CIT-212ENST00000543239 RPL37AP61513 92 aaKnown RBP10.3□□□□□ -0.76
CIT-212ENST00000543239 SEC11AP67812 179 aa10.3□□□□□ -0.76
CIT-212ENST00000543239 RNF151Q2KHN1 245 aa10.3□□□□□ -0.76
CIT-212ENST00000543239 ZC2HC1BQ5TFG8 222 aa10.3□□□□□ -0.76
CIT-212ENST00000543239 SCGB3A1Q96QR1 104 aa10.3□□□□□ -0.76
CIT-212ENST00000543239 MRPL35Q9NZE8 188 aaKnown RBP10.29□□□□□ -0.76
CIT-212ENST00000543239 NDUFA1O15239 70 aa10.28□□□□□ -0.76
CIT-212ENST00000543239 STPG4Q8N801 248 aa10.28□□□□□ -0.76
CIT-212ENST00000543239 C18orf32Q8TCD1 76 aa10.28□□□□□ -0.76
CIT-212ENST00000543239 YPEL4Q96NS1 127 aa10.28□□□□□ -0.76
CIT-212ENST00000543239 PTTG1IPP53801 180 aa10.27□□□□□ -0.77
CIT-212ENST00000543239 HERVK_113P63121 156 aa10.27□□□□□ -0.77
CIT-212ENST00000543239 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.26□□□□□ -0.77
CIT-212ENST00000543239 KIAA0087Q14695 138 aa10.26□□□□□ -0.77
CIT-212ENST00000543239 C7orf33Q8WU49 177 aa10.25□□□□□ -0.77
CIT-212ENST00000543239 MYCBP2O75592 4640 aa10.24□□□□□ -0.77
CIT-212ENST00000543239 LINC00614P0C842 121 aa10.24□□□□□ -0.77
CIT-212ENST00000543239 RAB5BP61020 215 aa10.24□□□□□ -0.77
CIT-212ENST00000543239 GAGE2BQ13066 116 aa10.24□□□□□ -0.77
CIT-212ENST00000543239 URB1-AS1Q96HZ7 61 aa10.24□□□□□ -0.77
CIT-212ENST00000543239 GEMIN7Q9H840 131 aaKnown RBP10.24□□□□□ -0.77
CIT-212ENST00000543239 FLG2Q5D862 2391 aaPredicted RBP10.24□□□□□ -0.77
CIT-212ENST00000543239 RPL18AQ02543 176 aaKnown RBP10.23□□□□□ -0.77
CIT-212ENST00000543239 C10orf25Q5T742 122 aa10.23□□□□□ -0.77
CIT-212ENST00000543239 UNQ6190/PRO20217Q6UXQ8 127 aa10.23□□□□□ -0.77
CIT-212ENST00000543239 CBLN2Q8IUK8 224 aa10.23□□□□□ -0.77
CIT-212ENST00000543239 SLC7A5P1Q8MH63 180 aa10.23□□□□□ -0.77
CIT-212ENST00000543239 CDKN2A-AS1Q9UH64 79 aa10.23□□□□□ -0.77
CIT-212ENST00000543239 A0A096LNJ9 63 aa10.22□□□□□ -0.77
CIT-212ENST00000543239 A0A0J9YXV3 536 aa10.22□□□□□ -0.77
CIT-212ENST00000543239 TRBV30A0A0K0K1B3 111 aa10.22□□□□□ -0.77
CIT-212ENST00000543239 TINCRA0A1B0GVN0 87 aa10.22□□□□□ -0.77
CIT-212ENST00000543239 TLX1NBP0CAT3 122 aa10.22□□□□□ -0.77
CIT-212ENST00000543239 PMVKQ15126 192 aa10.22□□□□□ -0.77
CIT-212ENST00000543239 CST9LQ9H4G1 147 aa10.22□□□□□ -0.77
CIT-212ENST00000543239 C6orf48Q9UBA6 75 aa10.22□□□□□ -0.77
CIT-212ENST00000543239 HBDP02042 147 aa10.21□□□□□ -0.77
CIT-212ENST00000543239 PRSS2P07478 247 aa10.21□□□□□ -0.77
CIT-212ENST00000543239 Q8IZM0 81 aa10.21□□□□□ -0.77
CIT-212ENST00000543239 PACRGQ96M98 296 aaPredicted RBP10.21□□□□□ -0.77
CIT-212ENST00000543239 IGLV5-45A0A087WSX0 123 aa10.2□□□□□ -0.78
CIT-212ENST00000543239 C2orf82Q6UX34 121 aa10.2□□□□□ -0.78
CIT-212ENST00000543239 LINC00469Q8N7U9 141 aa10.2□□□□□ -0.78
CIT-212ENST00000543239 TOMM7Q9P0U1 55 aa10.19□□□□□ -0.78
CIT-212ENST00000543239 CKS1BP61024 79 aa10.18□□□□□ -0.78
CIT-212ENST00000543239 PDZD11Q5EBL8 140 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms