RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 RNF223E7ERA6 249 aa8.25□□□□□ -1.09
CDH4-201ENST00000543233 PSMG3-AS1Q96PY0 264 aa8.25□□□□□ -1.09
CDH4-201ENST00000543233 UBR5O95071 2799 aaPredicted RBP8.25□□□□□ -1.09
CDH4-201ENST00000543233 A0A087WWL8 130 aa8.25□□□□□ -1.09
CDH4-201ENST00000543233 PPP1R17O96001 155 aa8.25□□□□□ -1.09
CDH4-201ENST00000543233 SNRPD3P62318 126 aaKnown RBP8.25□□□□□ -1.09
CDH4-201ENST00000543233 FLNAP21333 2647 aaKnown RBP8.25□□□□□ -1.09
CDH4-201ENST00000543233 RNASE4P34096 147 aaKnown RBP8.25□□□□□ -1.09
CDH4-201ENST00000543233 RPL28P46779 137 aaKnown RBP8.25□□□□□ -1.09
CDH4-201ENST00000543233 DEFB112Q30KQ8 113 aa8.25□□□□□ -1.09
CDH4-201ENST00000543233 RHPN1-AS1Q9BWJ2 59 aa8.25□□□□□ -1.09
CDH4-201ENST00000543233 U3KQE9 123 aa8.25□□□□□ -1.09
CDH4-201ENST00000543233 ITPR2Q14571 2701 aa8.24□□□□□ -1.09
CDH4-201ENST00000543233 F8WEM9 126 aa8.24□□□□□ -1.09
CDH4-201ENST00000543233 VCYO14598 125 aa8.24□□□□□ -1.09
CDH4-201ENST00000543233 UBE2D4Q9Y2X8 147 aa8.24□□□□□ -1.09
CDH4-201ENST00000543233 TRBV7-6A0A0J9YX20 115 aa8.24□□□□□ -1.09
CDH4-201ENST00000543233 A0A0J9YX75 114 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 B4DSR2 109 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 H7BZZ5 65 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 FAM19A1Q7Z5A9 133 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 COPS9Q8WXC6 57 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 RMI2Q96E14 147 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 Q96MF0 132 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 A6NDX4 124 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 KRTAP10-9P60411 292 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 Q8N2B8 174 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 FAM218AQ96MZ4 157 aa8.23□□□□□ -1.09
CDH4-201ENST00000543233 ENHOQ6UWT2 76 aa8.22□□□□□ -1.09
CDH4-201ENST00000543233 GPHB5Q86YW7 130 aa8.22□□□□□ -1.09
CDH4-201ENST00000543233 GNRH2O43555 120 aa8.22□□□□□ -1.09
CDH4-201ENST00000543233 LYPD5Q6UWN5 251 aa8.22□□□□□ -1.09
CDH4-201ENST00000543233 ITPR3Q14573 2671 aa8.22□□□□□ -1.09
CDH4-201ENST00000543233 IGHV4-4A0A075B6R2 117 aa8.21□□□□□ -1.09
CDH4-201ENST00000543233 CD28P10747 220 aa8.21□□□□□ -1.09
CDH4-201ENST00000543233 APCP25054 2843 aa8.21□□□□□ -1.09
CDH4-201ENST00000543233 TMEM89A2RUT3 159 aa8.21□□□□□ -1.1
CDH4-201ENST00000543233 CCKP06307 115 aa8.21□□□□□ -1.1
CDH4-201ENST00000543233 C9orf129Q5T035 196 aaKnown RBP8.21□□□□□ -1.1
CDH4-201ENST00000543233 TRBV27A0A0K0K1C4 114 aa8.2□□□□□ -1.1
CDH4-201ENST00000543233 NDUFA4O00483 81 aa8.2□□□□□ -1.1
CDH4-201ENST00000543233 SUMO4Q6EEV6 95 aa8.2□□□□□ -1.1
CDH4-201ENST00000543233 NIPBLQ6KC79 2804 aaeCLIP8.2□□□□□ -1.1
CDH4-201ENST00000543233 NCR3O14931 201 aa8.2□□□□□ -1.1
CDH4-201ENST00000543233 C19orf54Q5BKX5 351 aa8.2□□□□□ -1.1
CDH4-201ENST00000543233 KHDC1LQ5JSQ8 128 aa8.2□□□□□ -1.1
CDH4-201ENST00000543233 C9orf47Q6ZRZ4 202 aa8.2□□□□□ -1.1
CDH4-201ENST00000543233 ZNF469Q96JG9 3925 aaPredicted RBP8.19□□□□□ -1.1
CDH4-201ENST00000543233 SOCS3O14543 225 aa8.19□□□□□ -1.1
CDH4-201ENST00000543233 HTN1P15515 57 aa8.19□□□□□ -1.1
CDH4-201ENST00000543233 IGHV1-58A0A0C4DH39 117 aa8.18□□□□□ -1.1
CDH4-201ENST00000543233 DEFB136Q30KP8 78 aa8.18□□□□□ -1.1
CDH4-201ENST00000543233 VSIG2Q96IQ7 327 aa8.18□□□□□ -1.1
CDH4-201ENST00000543233 C22orf24Q9Y442 160 aa8.18□□□□□ -1.1
CDH4-201ENST00000543233 FAM222AQ5U5X8 452 aa8.18□□□□□ -1.1
CDH4-201ENST00000543233 ZFAND2AQ8N6M9 145 aa8.18□□□□□ -1.1
CDH4-201ENST00000543233 USMG5Q96IX5 58 aa8.18□□□□□ -1.1
CDH4-201ENST00000543233 EPM2AB3EWF7 344 aa8.18□□□□□ -1.1
CDH4-201ENST00000543233 TRAV21A0A0B4J279 112 aa8.17□□□□□ -1.1
CDH4-201ENST00000543233 POLR2KP53803 58 aaKnown RBP8.17□□□□□ -1.1
CDH4-201ENST00000543233 HIVEP2P31629 2446 aa8.16□□□□□ -1.1
CDH4-201ENST00000543233 IGLV4-3A0A075B6K6 122 aa8.16□□□□□ -1.1
CDH4-201ENST00000543233 MRPS36P82909 103 aaKnown RBP8.16□□□□□ -1.1
CDH4-201ENST00000543233 C11orf44Q8N8P7 122 aa8.16□□□□□ -1.1
CDH4-201ENST00000543233 LINC01356Q8N9X3 169 aa8.16□□□□□ -1.1
CDH4-201ENST00000543233 SETXQ7Z333 2677 aaKnown RBP8.16□□□□□ -1.1
CDH4-201ENST00000543233 BEAN1Q3B7T3 259 aa8.16□□□□□ -1.1
CDH4-201ENST00000543233 LINC00308Q8TCZ7 52 aa8.16□□□□□ -1.1
CDH4-201ENST00000543233 C18orf65Q6ZTR6 163 aa8.15□□□□□ -1.1
CDH4-201ENST00000543233 UNC79Q9P2D8 2635 aa8.15□□□□□ -1.1
CDH4-201ENST00000543233 KLK9Q9UKQ9 250 aa8.15□□□□□ -1.11
CDH4-201ENST00000543233 PAX4O43316 350 aa8.14□□□□□ -1.11
CDH4-201ENST00000543233 IGLV1-40P01703 118 aa8.14□□□□□ -1.11
CDH4-201ENST00000543233 MUC4Q99102 2169 aa8.14□□□□□ -1.11
CDH4-201ENST00000543233 A0A087WZ39 114 aa8.14□□□□□ -1.11
CDH4-201ENST00000543233 MRPL55Q7Z7F7 128 aaKnown RBP8.14□□□□□ -1.11
CDH4-201ENST00000543233 FN1P02751 2386 aaKnown RBP8.14□□□□□ -1.11
CDH4-201ENST00000543233 SLPIP03973 132 aa8.14□□□□□ -1.11
CDH4-201ENST00000543233 SPINK13Q1W4C9 94 aa8.14□□□□□ -1.11
CDH4-201ENST00000543233 KLK9Q2XQG4 91 aa8.14□□□□□ -1.11
CDH4-201ENST00000543233 FAM229BQ4G0N7 80 aa8.14□□□□□ -1.11
CDH4-201ENST00000543233 MRPL53Q96EL3 112 aaKnown RBP8.14□□□□□ -1.11
CDH4-201ENST00000543233 RNASE1P07998 156 aaKnown RBP8.13□□□□□ -1.11
CDH4-201ENST00000543233 DAD1P61803 113 aa8.13□□□□□ -1.11
CDH4-201ENST00000543233 Q9H8V8 135 aa8.13□□□□□ -1.11
CDH4-201ENST00000543233 IGHV4OR15-8A0A075B7B6 117 aa8.13□□□□□ -1.11
CDH4-201ENST00000543233 A0A087WW49 117 aa8.13□□□□□ -1.11
CDH4-201ENST00000543233 PRM2P04554 102 aa8.13□□□□□ -1.11
CDH4-201ENST00000543233 TRAV7A0A075B6U4 112 aa8.12□□□□□ -1.11
CDH4-201ENST00000543233 A0A087WYN8 130 aa8.12□□□□□ -1.11
CDH4-201ENST00000543233 PIK3CD-AS1Q5SR53 167 aa8.12□□□□□ -1.11
CDH4-201ENST00000543233 C20orf203Q8NBC4 194 aa8.12□□□□□ -1.11
CDH4-201ENST00000543233 PLA2G2AP14555 144 aa8.12□□□□□ -1.11
CDH4-201ENST00000543233 CD164Q04900 197 aa8.12□□□□□ -1.11
CDH4-201ENST00000543233 LECT2O14960 151 aa8.12□□□□□ -1.11
CDH4-201ENST00000543233 BAHCC1Q9P281 2608 aa8.11□□□□□ -1.11
CDH4-201ENST00000543233 CRPP02741 224 aa8.11□□□□□ -1.11
CDH4-201ENST00000543233 RNASE3P12724 160 aaKnown RBP8.11□□□□□ -1.11
CDH4-201ENST00000543233 SLURP1P55000 103 aa8.11□□□□□ -1.11
CDH4-201ENST00000543233 H3BUA1 57 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 169.8 ms