RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 CTDSP1Q9GZU7 261 aa9.74□□□□□ -0.85
CSF1R-209ENST00000543093 IFITM10A6NMD0 228 aa9.73□□□□□ -0.85
CSF1R-209ENST00000543093 PRSS47A8MTI9 375 aa9.73□□□□□ -0.85
CSF1R-209ENST00000543093 APOMO95445 188 aa9.73□□□□□ -0.85
CSF1R-209ENST00000543093 SYCNQ0VAF6 134 aa9.73□□□□□ -0.85
CSF1R-209ENST00000543093 COMMD7Q86VX2 200 aa9.73□□□□□ -0.85
CSF1R-209ENST00000543093 PRR3P79522 188 aaKnown RBP9.72□□□□□ -0.85
CSF1R-209ENST00000543093 STPG4Q8N801 248 aa9.72□□□□□ -0.85
CSF1R-209ENST00000543093 OPRPNQ99935 248 aaPredicted RBP9.72□□□□□ -0.85
CSF1R-209ENST00000543093 SEC11CQ9BY50 192 aa9.72□□□□□ -0.85
CSF1R-209ENST00000543093 IGLV4-69A0A075B6H9 119 aa9.71□□□□□ -0.86
CSF1R-209ENST00000543093 TRAV9-1A0A075B6T8 112 aa9.71□□□□□ -0.86
CSF1R-209ENST00000543093 A0A096LNI7 61 aa9.71□□□□□ -0.86
CSF1R-209ENST00000543093 C5orf38Q86SI9 138 aa9.71□□□□□ -0.86
CSF1R-209ENST00000543093 Q8N8P6 123 aa9.71□□□□□ -0.86
CSF1R-209ENST00000543093 FAM104AQ969W3 186 aa9.71□□□□□ -0.86
CSF1R-209ENST00000543093 LINC01600Q96MT4 127 aa9.71□□□□□ -0.86
CSF1R-209ENST00000543093 ODF1Q14990 250 aa9.7□□□□□ -0.86
CSF1R-209ENST00000543093 CAMK2N2Q96S95 79 aa9.7□□□□□ -0.86
CSF1R-209ENST00000543093 LINC00474Q9P2X8 69 aa9.7□□□□□ -0.86
CSF1R-209ENST00000543093 PYGO1Q9Y3Y4 419 aa9.7□□□□□ -0.86
CSF1R-209ENST00000543093 K7EMI3 77 aa9.69□□□□□ -0.86
CSF1R-209ENST00000543093 S100PP25815 95 aa9.69□□□□□ -0.86
CSF1R-209ENST00000543093 SPAG11BQ08648 103 aa9.69□□□□□ -0.86
CSF1R-209ENST00000543093 ORMDL2Q53FV1 153 aa9.69□□□□□ -0.86
CSF1R-209ENST00000543093 OR10D4PQ8NGN7 298 aa9.69□□□□□ -0.86
CSF1R-209ENST00000543093 TMEM141Q96I45 108 aa9.69□□□□□ -0.86
CSF1R-209ENST00000543093 CYSLTR1Q9Y271 337 aa9.69□□□□□ -0.86
CSF1R-209ENST00000543093 IGLV4-3A0A075B6K6 122 aa9.68□□□□□ -0.86
CSF1R-209ENST00000543093 TGIF2-C20orf24A0A0A6YYL0 155 aa9.68□□□□□ -0.86
CSF1R-209ENST00000543093 C2orf66Q6UXQ4 117 aa9.68□□□□□ -0.86
CSF1R-209ENST00000543093 TEX43Q6ZNM6 134 aa9.68□□□□□ -0.86
CSF1R-209ENST00000543093 C2orf48Q96LS8 159 aa9.68□□□□□ -0.86
CSF1R-209ENST00000543093 NXT2Q9NPJ8 142 aaKnown RBP9.68□□□□□ -0.86
CSF1R-209ENST00000543093 TNXBP22105 4242 aa9.67□□□□□ -0.86
CSF1R-209ENST00000543093 IGHV3OR16-9A0A0B4J2B5 98 aa9.67□□□□□ -0.86
CSF1R-209ENST00000543093 LOC107984640A0A0U1RRK4 108 aa9.67□□□□□ -0.86
CSF1R-209ENST00000543093 Q6ZN92 141 aa9.67□□□□□ -0.86
CSF1R-209ENST00000543093 ORAOV1Q8WV07 137 aa9.67□□□□□ -0.86
CSF1R-209ENST00000543093 C2orf88Q9BSF0 95 aa9.67□□□□□ -0.86
CSF1R-209ENST00000543093 LRP2P98164 4655 aa9.65□□□□□ -0.86
CSF1R-209ENST00000543093 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
CSF1R-209ENST00000543093 PTTG1IPP53801 180 aa9.65□□□□□ -0.86
CSF1R-209ENST00000543093 RHEBQ15382 184 aa9.65□□□□□ -0.86
CSF1R-209ENST00000543093 KIAA1644Q3SXP7 199 aa9.65□□□□□ -0.86
CSF1R-209ENST00000543093 NPSP0C0P6 89 aa9.64□□□□□ -0.87
CSF1R-209ENST00000543093 G0S2P27469 103 aa9.64□□□□□ -0.87
CSF1R-209ENST00000543093 C10orf91Q5T1B1 145 aa9.64□□□□□ -0.87
CSF1R-209ENST00000543093 SPINK6Q6UWN8 80 aa9.64□□□□□ -0.87
CSF1R-209ENST00000543093 CARHSP1Q9Y2V2 147 aaKnown RBP9.64□□□□□ -0.87
CSF1R-209ENST00000543093 F8WDY8 70 aa9.63□□□□□ -0.87
CSF1R-209ENST00000543093 NDUFA1O15239 70 aa9.63□□□□□ -0.87
CSF1R-209ENST00000543093 RPL18AQ02543 176 aaKnown RBP9.63□□□□□ -0.87
CSF1R-209ENST00000543093 GAGE2BQ13066 116 aa9.63□□□□□ -0.87
CSF1R-209ENST00000543093 COX19Q49B96 90 aa9.63□□□□□ -0.87
CSF1R-209ENST00000543093 LINC00242Q5T6M2 205 aa9.63□□□□□ -0.87
CSF1R-209ENST00000543093 REG3GQ6UW15 175 aa9.63□□□□□ -0.87
CSF1R-209ENST00000543093 GNB1LQ9BYB4 327 aa9.63□□□□□ -0.87
CSF1R-209ENST00000543093 A0A087WZ39 114 aa9.62□□□□□ -0.87
CSF1R-209ENST00000543093 UBE2D1P51668 147 aa9.62□□□□□ -0.87
CSF1R-209ENST00000543093 KRTAP10-8P60410 259 aa9.62□□□□□ -0.87
CSF1R-209ENST00000543093 RNF151Q2KHN1 245 aa9.62□□□□□ -0.87
CSF1R-209ENST00000543093 VCX2Q9H322 139 aa9.62□□□□□ -0.87
CSF1R-209ENST00000543093 RPS10P5Q9NQ39 176 aa9.62□□□□□ -0.87
CSF1R-209ENST00000543093 MRPL35Q9NZE8 188 aaKnown RBP9.62□□□□□ -0.87
CSF1R-209ENST00000543093 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.61□□□□□ -0.87
CSF1R-209ENST00000543093 MT-ND6P03923 174 aa9.61□□□□□ -0.87
CSF1R-209ENST00000543093 PAPPA-AS1Q5QFB9 102 aa9.61□□□□□ -0.87
CSF1R-209ENST00000543093 LINC00173Q6ZV60 143 aa9.61□□□□□ -0.87
CSF1R-209ENST00000543093 AMELXQ99217 191 aa9.61□□□□□ -0.87
CSF1R-209ENST00000543093 IGIPA6NJ69 53 aa9.6□□□□□ -0.87
CSF1R-209ENST00000543093 SRSF9Q13242 221 aaKnown RBP eCLIP9.6□□□□□ -0.87
CSF1R-209ENST00000543093 ZC2HC1BQ5TFG8 222 aa9.6□□□□□ -0.87
CSF1R-209ENST00000543093 Q6ZRP5 223 aa9.6□□□□□ -0.87
CSF1R-209ENST00000543093 TIMM17AQ99595 171 aa9.6□□□□□ -0.87
CSF1R-209ENST00000543093 TOMM6Q96B49 74 aa9.59□□□□□ -0.87
CSF1R-209ENST00000543093 ALKBH7Q9BT30 221 aaPredicted RBP9.59□□□□□ -0.87
CSF1R-209ENST00000543093 MRPL18Q9H0U6 180 aaKnown RBP9.59□□□□□ -0.87
CSF1R-209ENST00000543093 LINC01561Q8N1V8 128 aa9.58□□□□□ -0.88
CSF1R-209ENST00000543093 RNF213Q63HN8 5207 aa9.57□□□□□ -0.88
CSF1R-209ENST00000543093 SEC11AP67812 179 aa9.57□□□□□ -0.88
CSF1R-209ENST00000543093 FABP9Q0Z7S8 132 aa9.57□□□□□ -0.88
CSF1R-209ENST00000543093 NDUFA5Q16718 116 aa9.57□□□□□ -0.88
CSF1R-209ENST00000543093 FAM19A3Q7Z5A8 133 aa9.57□□□□□ -0.88
CSF1R-209ENST00000543093 C6orf48Q9UBA6 75 aa9.57□□□□□ -0.88
CSF1R-209ENST00000543093 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
CSF1R-209ENST00000543093 HERVK_113P63121 156 aa9.56□□□□□ -0.88
CSF1R-209ENST00000543093 C10orf25Q5T742 122 aa9.56□□□□□ -0.88
CSF1R-209ENST00000543093 UNQ6190/PRO20217Q6UXQ8 127 aa9.56□□□□□ -0.88
CSF1R-209ENST00000543093 SCGB3A1Q96QR1 104 aa9.56□□□□□ -0.88
CSF1R-209ENST00000543093 SMCO4Q9NRQ5 59 aa9.56□□□□□ -0.88
CSF1R-209ENST00000543093 LINC01546A6NGU7 62 aa9.55□□□□□ -0.88
CSF1R-209ENST00000543093 APOC3P02656 99 aa9.55□□□□□ -0.88
CSF1R-209ENST00000543093 PRSS2P07478 247 aa9.55□□□□□ -0.88
CSF1R-209ENST00000543093 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
CSF1R-209ENST00000543093 KIAA0087Q14695 138 aa9.55□□□□□ -0.88
CSF1R-209ENST00000543093 C9orf116Q5BN46 136 aaPredicted RBP9.55□□□□□ -0.88
CSF1R-209ENST00000543093 FA2HQ7L5A8 372 aa9.55□□□□□ -0.88
CSF1R-209ENST00000543093 ERASQ7Z444 233 aa9.55□□□□□ -0.88
CSF1R-209ENST00000543093 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms