RNA–Protein interactions for RNA: ENST00000542953.1

NPIPB3-211, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-211ENST00000542953 ADIRFQ15847 76 aa2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 MRPL51Q4U2R6 128 aaKnown RBP2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 HIGD2BQ4VC39 106 aa2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 AMMECR1LQ6DCA0 310 aa2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 RNASEKQ6P5S7 137 aaKnown RBP2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 PRSS3P2Q8NHM4 247 aa2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 NAT8BQ9UHF3 227 aa2.9□□□□□ -1.95
NPIPB3-211ENST00000542953 IGLV1-50A0A075B6I6 118 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 TRBV24-1A0A075B6N3 115 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 XCL1P47992 114 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 CAMPP49913 170 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 SUMO2P61956 95 aaKnown RBP2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 RPL32P62910 135 aaKnown RBP2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 COX6A2Q02221 97 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 PEA15Q15121 130 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 C21orf62-AS1Q17RA5 79 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 MAJINQ3KP22 176 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 CFAP161Q6P656 301 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 STPG4Q8N801 248 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 BORCS7Q96B45 105 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 LINC00526Q96FQ7 95 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 SMDT1Q9H4I9 107 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 UBE2D4Q9Y2X8 147 aa2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 CSDC2Q9Y534 153 aaKnown RBP2.89□□□□□ -1.95
NPIPB3-211ENST00000542953 A0A096LNI7 61 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 C7orf77A4D0Y5 90 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 LINC00862A6NCI5 91 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 ZNF561-AS1K7EIQ3 104 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 TNFRSF6BO95407 300 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 NPYP01303 97 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 RPL39P62891 51 aaKnown RBP2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 RNASE13Q5GAN3 156 aaKnown RBP2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 MRPL54Q6P161 138 aaKnown RBP2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 CD164L2Q6UWJ8 174 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 Q6ZUT4 128 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 Q8N9P0 234 aaPredicted RBP2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 TMEM101Q96IK0 257 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 BTF3L4Q96K17 158 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 OPRPNQ99935 248 aaPredicted RBP2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 C20orf78Q9BR46 151 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 TIMM21Q9BVV7 248 aa2.88□□□□□ -1.95
NPIPB3-211ENST00000542953 IGHV1-58A0A0C4DH39 117 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 IGKV2-24A0A0C4DH68 120 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 A0A1B0GW15 77 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 D6R8Y8 96 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 PPP1R2P9O14990 202 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 TCAPO15273 167 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 PPP1R17O96001 155 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 KRTAP1-4P0C5Y4 121 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 FCER1GP30273 86 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 CKS2P33552 79 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 HBBP68871 147 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 SS18Q15532 418 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 SMIM2Q9BVW6 85 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 LINC00474Q9P2X8 69 aa2.87□□□□□ -1.95
NPIPB3-211ENST00000542953 IGLV4-69A0A075B6H9 119 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 TRAV13-1A0A0B4J241 112 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 A0A1W2PNN7 141 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 PRSS47A8MTI9 375 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 C1orf196B1AJZ1 125 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 RPL13AP40429 203 aaKnown RBP2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 IFITM2Q01629 132 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 SYCNQ0VAF6 134 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 TPRXLQ17RH7 258 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 C5orf38Q86SI9 138 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 DIRC1Q969H9 104 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 KIR2DL4Q99706 377 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 USH2AO75445 5202 aa2.86□□□□□ -1.95
NPIPB3-211ENST00000542953 IGLV4-3A0A075B6K6 122 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 IGHV3OR16-9A0A0B4J2B5 98 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 F8W036 122 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 H0Y9J4 135 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 COX7A2LO14548 114 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 PPBPP02775 128 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 S100A8P05109 93 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 ADCYAP1P18509 176 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 PTTG1IPP53801 180 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 MRPS36P82909 103 aaKnown RBP2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 CLLU1Q5K131 121 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 C10orf25Q5T742 122 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 TMEM136Q6ZRR5 245 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 ATP5L2Q7Z4Y8 100 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 ORMDL3Q8N138 153 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 C2orf48Q96LS8 159 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 CARD19Q96LW7 228 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 PRELID3AQ96N28 172 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 SPANXA1Q9NS26 97 aa2.85□□□□□ -1.95
NPIPB3-211ENST00000542953 FCGBPQ9Y6R7 5405 aaPredicted RBP2.84□□□□□ -1.95
NPIPB3-211ENST00000542953 CFC1BP0CG36 223 aa2.84□□□□□ -1.95
NPIPB3-211ENST00000542953 PNRC1Q12796 327 aaPredicted RBP2.84□□□□□ -1.95
NPIPB3-211ENST00000542953 KIAA0087Q14695 138 aa2.84□□□□□ -1.95
NPIPB3-211ENST00000542953 LINC00242Q5T6M2 205 aa2.84□□□□□ -1.95
NPIPB3-211ENST00000542953 ZC2HC1BQ5TFG8 222 aa2.84□□□□□ -1.95
NPIPB3-211ENST00000542953 LINC00173Q6ZV60 143 aa2.84□□□□□ -1.95
NPIPB3-211ENST00000542953 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
NPIPB3-211ENST00000542953 KRTAP7-1Q8IUC3 87 aa2.84□□□□□ -1.95
NPIPB3-211ENST00000542953 PKIGQ9Y2B9 76 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms