RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 PACRGQ96M98 296 aaPredicted RBP4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 MAP1LC3CQ9BXW4 147 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 HSPB8Q9UJY1 196 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 CYSLTR1Q9Y271 337 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 TRBV25-1A0A075B6N4 114 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 A0A096LNJ9 63 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 IGKV2-29A2NJV5 120 aaPredicted RBP4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 LINC01549A6NIU2 74 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 IFITM10A6NMD0 228 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 TMEM262E9PQX1 116 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 ATP5LO75964 103 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 RPL39P62891 51 aaKnown RBP4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 SMAGPQ0VAQ4 97 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 AMMECR1LQ6DCA0 310 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 Q6ZN92 141 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 SH2D6Q7Z4S9 175 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 BAALCQ8WXS3 180 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 TOMM6Q96B49 74 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 IFI27L1Q96BM0 104 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 CHCHD5Q9BSY4 110 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 TMEM243Q9BU79 118 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 CHCHD7Q9BUK0 85 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 TM2D2Q9BX73 214 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 GTSF1LQ9H1H1 148 aa4.92□□□□□ -1.62
CHMP4A-209ENST00000542700 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.91□□□□□ -1.62
CHMP4A-209ENST00000542700 C3orf79P0CE67 100 aa4.91□□□□□ -1.62
CHMP4A-209ENST00000542700 GAGE6Q13070 117 aa4.91□□□□□ -1.62
CHMP4A-209ENST00000542700 PRR4Q16378 134 aa4.91□□□□□ -1.62
CHMP4A-209ENST00000542700 ERASQ7Z444 233 aa4.91□□□□□ -1.62
CHMP4A-209ENST00000542700 TRBV6-8A0A0A6YYG3 113 aa4.9□□□□□ -1.63
CHMP4A-209ENST00000542700 TMEM141Q96I45 108 aa4.9□□□□□ -1.63
CHMP4A-209ENST00000542700 TMEM101Q96IK0 257 aa4.9□□□□□ -1.63
CHMP4A-209ENST00000542700 OPRPNQ99935 248 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-209ENST00000542700 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.9□□□□□ -1.63
CHMP4A-209ENST00000542700 TRAV8-6A0A0B4J262 113 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 C20orf202A1L168 122 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 SYS1-DBNDD2H3BUS1 97 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 IGHV3-30P01768 117 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 IGHV3-33P01772 117 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 LINC00694P0DN24 101 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 IGHV3-30-3P0DP02 117 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 IGHV3-30-5P0DP03 117 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 FGF6P10767 208 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 LINC01556Q5JQF7 62 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 REG3GQ6UW15 175 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 PET117Q6UWS5 81 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 VCX2Q9H322 139 aa4.89□□□□□ -1.63
CHMP4A-209ENST00000542700 IGIPA6NJ69 53 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 H7C423 109 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 JOSD1Q15040 202 aaPredicted RBP4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 PMVKQ15126 192 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 RNASE13Q5GAN3 156 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 PAPPA-AS1Q5QFB9 102 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 ZC2HC1BQ5TFG8 222 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 Q8N976 141 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 OR5A1Q8NGJ0 315 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 TIMM17AQ99595 171 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 PMCHL2Q9BQD1 86 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 UBE2D4Q9Y2X8 147 aa4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 CHTOPQ9Y3Y2 248 aaKnown RBP4.88□□□□□ -1.63
CHMP4A-209ENST00000542700 IGLV4-3A0A075B6K6 122 aa4.87□□□□□ -1.63
CHMP4A-209ENST00000542700 A0A087WX48 190 aa4.87□□□□□ -1.63
CHMP4A-209ENST00000542700 IGKV3OR2-268A0A0C4DH90 116 aa4.87□□□□□ -1.63
CHMP4A-209ENST00000542700 LINC01547P58512 204 aaPredicted RBP4.87□□□□□ -1.63
CHMP4A-209ENST00000542700 TEX43Q6ZNM6 134 aa4.87□□□□□ -1.63
CHMP4A-209ENST00000542700 TIMM21Q9BVV7 248 aa4.87□□□□□ -1.63
CHMP4A-209ENST00000542700 SPANXA1Q9NS26 97 aa4.87□□□□□ -1.63
CHMP4A-209ENST00000542700 PYGO1Q9Y3Y4 419 aa4.87□□□□□ -1.63
CHMP4A-209ENST00000542700 TIRAPP58753 221 aa4.86□□□□□ -1.63
CHMP4A-209ENST00000542700 PKIAP61925 76 aa4.86□□□□□ -1.63
CHMP4A-209ENST00000542700 RBX1P62877 108 aa4.86□□□□□ -1.63
CHMP4A-209ENST00000542700 PYY3Q5JQD4 70 aa4.86□□□□□ -1.63
CHMP4A-209ENST00000542700 MRPL52Q86TS9 123 aaKnown RBP4.86□□□□□ -1.63
CHMP4A-209ENST00000542700 ATOH7Q8N100 152 aa4.86□□□□□ -1.63
CHMP4A-209ENST00000542700 ZNF664Q8N3J9 261 aa4.86□□□□□ -1.63
CHMP4A-209ENST00000542700 CST9LQ9H4G1 147 aa4.86□□□□□ -1.63
CHMP4A-209ENST00000542700 IGLV4-60A0A075B6I1 120 aa4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 TRAV12-1A0A0B4J245 112 aa4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 ANGP03950 147 aaKnown RBP4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 ZNF25P17030 456 aaPredicted RBP4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 S100A12P80511 92 aa4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 MRPS36P82909 103 aaKnown RBP4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 LINC01545Q5VT33 79 aa4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 Q6ZUT4 128 aa4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 C2orf88Q9BSF0 95 aa4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 CDC42SE2Q9NRR3 84 aa4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 CSDC2Q9Y534 153 aaKnown RBP4.85□□□□□ -1.63
CHMP4A-209ENST00000542700 TRAV13-1A0A0B4J241 112 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 A0A1B0GUV1 79 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 HSBP1L1C9JCN9 74 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 F8VRH5 84 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 DPM2O94777 84 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 IGKCP01834 107 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 NPSP0C0P6 89 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 SS18Q15532 418 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 MPV17L2Q567V2 206 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 AMELXQ99217 191 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 C12orf57Q99622 126 aa4.84□□□□□ -1.63
CHMP4A-209ENST00000542700 MRPL35Q9NZE8 188 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms