RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 FDCSPQ8NFU4 85 aa4.05□□□□□ -1.76
XRCC4-206ENST00000542685 CYP4F30PQ9H0H9 118 aa4.05□□□□□ -1.76
XRCC4-206ENST00000542685 ESM1Q9NQ30 184 aa4.05□□□□□ -1.76
XRCC4-206ENST00000542685 CDH23Q9H251 3354 aa4.05□□□□□ -1.76
XRCC4-206ENST00000542685 MALRD1Q5VYJ5 2156 aa4.04□□□□□ -1.76
XRCC4-206ENST00000542685 A0A0J9YXV3 536 aa4.04□□□□□ -1.76
XRCC4-206ENST00000542685 LOC100131303A0A0U1RQF7 123 aa4.04□□□□□ -1.76
XRCC4-206ENST00000542685 ODF3BA8MYP8 253 aa4.04□□□□□ -1.76
XRCC4-206ENST00000542685 ZNF73O43830 326 aaPredicted RBP4.04□□□□□ -1.76
XRCC4-206ENST00000542685 LINC00315P59091 139 aa4.04□□□□□ -1.76
XRCC4-206ENST00000542685 LCA10Q71F78 164 aa4.04□□□□□ -1.76
XRCC4-206ENST00000542685 Q8N6K4 173 aa4.04□□□□□ -1.76
XRCC4-206ENST00000542685 FAM218AQ96MZ4 157 aa4.04□□□□□ -1.76
XRCC4-206ENST00000542685 PRO3102Q9H379 93 aa4.04□□□□□ -1.76
XRCC4-206ENST00000542685 LAMA2P24043 3122 aaKnown RBP4.03□□□□□ -1.76
XRCC4-206ENST00000542685 CNTRLQ7Z7A1 2325 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 RPL39P62891 51 aaKnown RBP4.03□□□□□ -1.76
XRCC4-206ENST00000542685 NREPQ16612 68 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 MINOS1Q5TGZ0 78 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 LYPD2Q6UXB3 125 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 C7orf65Q6ZTY9 151 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.03□□□□□ -1.76
XRCC4-206ENST00000542685 PRSS33Q8NF86 280 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 ZNF625Q96I27 306 aaPredicted RBP4.03□□□□□ -1.76
XRCC4-206ENST00000542685 BPESC1Q9GZL8 116 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 DPM3Q9P2X0 92 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 SNURFQ9Y675 71 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 MINOS1-NBL1R4GNA1 71 aa4.03□□□□□ -1.76
XRCC4-206ENST00000542685 C8orf87E5RJ46 101 aa4.02□□□□□ -1.77
XRCC4-206ENST00000542685 ATP6V0E1O15342 81 aa4.02□□□□□ -1.77
XRCC4-206ENST00000542685 DEFB114Q30KQ6 69 aa4.02□□□□□ -1.77
XRCC4-206ENST00000542685 FAM229BQ4G0N7 80 aa4.02□□□□□ -1.77
XRCC4-206ENST00000542685 SOSTDC1Q6X4U4 206 aa4.02□□□□□ -1.77
XRCC4-206ENST00000542685 Q9H8V8 135 aa4.02□□□□□ -1.77
XRCC4-206ENST00000542685 POLEQ07864 2286 aa4.02□□□□□ -1.77
XRCC4-206ENST00000542685 IGHV3-64A0A075B6Q5 118 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 IGHV3-21A0A0B4J1V1 117 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 IGHV3-72A0A0B4J1Y9 119 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 C9orf66Q5T8R8 295 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 ATP1A1-AS1Q5TC04 95 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 UNQ9165/PRO28630Q6UXU0 137 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 MIR7-3HGQ8N6C7 128 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 C11orf45Q8TAV5 145 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 DIRC1Q969H9 104 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 LIMD2Q9BT23 127 aa4.01□□□□□ -1.77
XRCC4-206ENST00000542685 TECTAO75443 2155 aa4□□□□□ -1.77
XRCC4-206ENST00000542685 ARFGEF3Q5TH69 2177 aa4□□□□□ -1.77
XRCC4-206ENST00000542685 A0A087WZ39 114 aa4□□□□□ -1.77
XRCC4-206ENST00000542685 LY6G6DO95868 133 aa4□□□□□ -1.77
XRCC4-206ENST00000542685 BSPH1Q075Z2 132 aa4□□□□□ -1.77
XRCC4-206ENST00000542685 ASB16-AS1Q495Z4 193 aa4□□□□□ -1.77
XRCC4-206ENST00000542685 Q6ZRP5 223 aa4□□□□□ -1.77
XRCC4-206ENST00000542685 ITLN2Q8WWU7 325 aaPredicted RBP4□□□□□ -1.77
XRCC4-206ENST00000542685 CCL17Q92583 94 aa4□□□□□ -1.77
XRCC4-206ENST00000542685 Q9HAA7 133 aa4□□□□□ -1.77
XRCC4-206ENST00000542685 RANBP2P49792 3224 aaKnown RBP4□□□□□ -1.77
XRCC4-206ENST00000542685 TRAV22A0A0B4J277 110 aa3.99□□□□□ -1.77
XRCC4-206ENST00000542685 LCE6AA0A183 80 aa3.99□□□□□ -1.77
XRCC4-206ENST00000542685 CLPSL1A2RUU4 121 aa3.99□□□□□ -1.77
XRCC4-206ENST00000542685 A6NN06 94 aa3.99□□□□□ -1.77
XRCC4-206ENST00000542685 M0QY20 66 aa3.99□□□□□ -1.77
XRCC4-206ENST00000542685 NDUFB1O75438 58 aa3.99□□□□□ -1.77
XRCC4-206ENST00000542685 RNASE3P12724 160 aaKnown RBP3.99□□□□□ -1.77
XRCC4-206ENST00000542685 ELOF1P60002 83 aaKnown RBP3.99□□□□□ -1.77
XRCC4-206ENST00000542685 SYCNQ0VAF6 134 aa3.99□□□□□ -1.77
XRCC4-206ENST00000542685 ZFAND2AQ8N6M9 145 aa3.99□□□□□ -1.77
XRCC4-206ENST00000542685 PLXNB1O43157 2135 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 ZGRF1Q86YA3 2104 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 TRBV6-8A0A0A6YYG3 113 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 IGHV7-81A0A0B4J1V7 117 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 IGKV2-29A2NJV5 120 aaPredicted RBP3.98□□□□□ -1.77
XRCC4-206ENST00000542685 BPY2O14599 106 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 NCR3O14931 201 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 LECT2O14960 151 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 LY6HO94772 140 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 APELAP0DMC3 54 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 NDPQ00604 133 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 FBXL19-AS1Q494R0 122 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 Q6ZQT0 140 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 LINC00269Q8N2A0 174 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 NKAPP1Q8N9T2 125 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 SMIM11BQ8TCY0 68 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 XIRP2A4UGR9 3374 aa3.98□□□□□ -1.77
XRCC4-206ENST00000542685 CUL9Q8IWT3 2517 aa3.97□□□□□ -1.77
XRCC4-206ENST00000542685 TRAV10A0A0B4J240 114 aa3.97□□□□□ -1.77
XRCC4-206ENST00000542685 H3BUA1 57 aa3.97□□□□□ -1.77
XRCC4-206ENST00000542685 K7EMT4 169 aa3.97□□□□□ -1.77
XRCC4-206ENST00000542685 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
XRCC4-206ENST00000542685 CLEC19AQ6UXS0 136 aa3.97□□□□□ -1.77
XRCC4-206ENST00000542685 Q8N9W7 124 aa3.97□□□□□ -1.77
XRCC4-206ENST00000542685 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
XRCC4-206ENST00000542685 KLLNB2CW77 178 aa3.96□□□□□ -1.78
XRCC4-206ENST00000542685 COX7A1P24310 79 aa3.96□□□□□ -1.78
XRCC4-206ENST00000542685 C9orf129Q5T035 196 aaKnown RBP3.96□□□□□ -1.78
XRCC4-206ENST00000542685 SND1-IT1Q9HBX3 110 aa3.96□□□□□ -1.78
XRCC4-206ENST00000542685 ARHGAP32A7KAX9 2087 aa3.96□□□□□ -1.78
XRCC4-206ENST00000542685 A0A1B0GW54 56 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 A8MUN3 132 aa3.95□□□□□ -1.78
XRCC4-206ENST00000542685 NDUFA4O00483 81 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 298.3 ms