RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 TMEM141Q96I45 108 aa12.83□□□□□ -0.36
CACNA2D4-215ENST00000542340 IGHV3OR16-9A0A0B4J2B5 98 aa12.82□□□□□ -0.36
CACNA2D4-215ENST00000542340 SNAPINO95295 136 aa12.82□□□□□ -0.36
CACNA2D4-215ENST00000542340 APOMO95445 188 aa12.82□□□□□ -0.36
CACNA2D4-215ENST00000542340 NPSP0C0P6 89 aa12.82□□□□□ -0.36
CACNA2D4-215ENST00000542340 COX6A2Q02221 97 aa12.82□□□□□ -0.36
CACNA2D4-215ENST00000542340 ALKBH7Q9BT30 221 aaPredicted RBP12.82□□□□□ -0.36
CACNA2D4-215ENST00000542340 SYCNQ0VAF6 134 aa12.81□□□□□ -0.36
CACNA2D4-215ENST00000542340 PRSS3P2Q8NHM4 247 aa12.81□□□□□ -0.36
CACNA2D4-215ENST00000542340 CARD19Q96LW7 228 aa12.81□□□□□ -0.36
CACNA2D4-215ENST00000542340 MRPL18Q9H0U6 180 aaKnown RBP12.81□□□□□ -0.36
CACNA2D4-215ENST00000542340 IGLV4-69A0A075B6H9 119 aa12.8□□□□□ -0.36
CACNA2D4-215ENST00000542340 FABP9Q0Z7S8 132 aa12.8□□□□□ -0.36
CACNA2D4-215ENST00000542340 TEX43Q6ZNM6 134 aa12.8□□□□□ -0.36
CACNA2D4-215ENST00000542340 SPACA4Q8TDM5 124 aa12.8□□□□□ -0.36
CACNA2D4-215ENST00000542340 DPH3Q96FX2 82 aa12.8□□□□□ -0.36
CACNA2D4-215ENST00000542340 PKIGQ9Y2B9 76 aa12.8□□□□□ -0.36
CACNA2D4-215ENST00000542340 IGIPA6NJ69 53 aa12.79□□□□□ -0.36
CACNA2D4-215ENST00000542340 CHTF8P0CG12 524 aa12.79□□□□□ -0.36
CACNA2D4-215ENST00000542340 Q6ZN92 141 aa12.79□□□□□ -0.36
CACNA2D4-215ENST00000542340 TGIF2-C20orf24A0A0A6YYL0 155 aa12.78□□□□□ -0.36
CACNA2D4-215ENST00000542340 LINC00242Q5T6M2 205 aa12.78□□□□□ -0.36
CACNA2D4-215ENST00000542340 OR10D4PQ8NGN7 298 aa12.78□□□□□ -0.36
CACNA2D4-215ENST00000542340 C2orf48Q96LS8 159 aa12.78□□□□□ -0.36
CACNA2D4-215ENST00000542340 AMELXQ99217 191 aa12.78□□□□□ -0.36
CACNA2D4-215ENST00000542340 C2orf88Q9BSF0 95 aa12.78□□□□□ -0.36
CACNA2D4-215ENST00000542340 VCX2Q9H322 139 aa12.78□□□□□ -0.36
CACNA2D4-215ENST00000542340 LINC01546A6NGU7 62 aa12.77□□□□□ -0.37
CACNA2D4-215ENST00000542340 TOMM6Q96B49 74 aa12.77□□□□□ -0.37
CACNA2D4-215ENST00000542340 A0A087WYN8 130 aa12.76□□□□□ -0.37
CACNA2D4-215ENST00000542340 UBE2D1P51668 147 aa12.76□□□□□ -0.37
CACNA2D4-215ENST00000542340 SPAG11BQ08648 103 aa12.76□□□□□ -0.37
CACNA2D4-215ENST00000542340 PAPPA-AS1Q5QFB9 102 aa12.76□□□□□ -0.37
CACNA2D4-215ENST00000542340 LINC00173Q6ZV60 143 aa12.76□□□□□ -0.37
CACNA2D4-215ENST00000542340 CAMK2N2Q96S95 79 aa12.76□□□□□ -0.37
CACNA2D4-215ENST00000542340 TIMM17AQ99595 171 aa12.76□□□□□ -0.37
CACNA2D4-215ENST00000542340 A0A087WZ39 114 aa12.75□□□□□ -0.37
CACNA2D4-215ENST00000542340 KRTAP10-4P60372 401 aaPredicted RBP12.75□□□□□ -0.37
CACNA2D4-215ENST00000542340 Q6ZRU5 148 aa12.75□□□□□ -0.37
CACNA2D4-215ENST00000542340 PLAC8Q9NZF1 115 aa12.75□□□□□ -0.37
CACNA2D4-215ENST00000542340 IGKV2-24A0A0C4DH68 120 aa12.74□□□□□ -0.37
CACNA2D4-215ENST00000542340 LINC01549A6NIU2 74 aa12.74□□□□□ -0.37
CACNA2D4-215ENST00000542340 ORAOV1Q8WV07 137 aa12.74□□□□□ -0.37
CACNA2D4-215ENST00000542340 LINC00474Q9P2X8 69 aa12.74□□□□□ -0.37
CACNA2D4-215ENST00000542340 TRAPPC1Q9Y5R8 145 aa12.74□□□□□ -0.37
CACNA2D4-215ENST00000542340 A0A096LNI7 61 aa12.73□□□□□ -0.37
CACNA2D4-215ENST00000542340 F8WDY8 70 aa12.73□□□□□ -0.37
CACNA2D4-215ENST00000542340 MAJINQ3KP22 176 aa12.73□□□□□ -0.37
CACNA2D4-215ENST00000542340 ZC2HC1BQ5TFG8 222 aa12.73□□□□□ -0.37
CACNA2D4-215ENST00000542340 ERASQ7Z444 233 aa12.73□□□□□ -0.37
CACNA2D4-215ENST00000542340 FA2HQ7L5A8 372 aa12.72□□□□□ -0.37
CACNA2D4-215ENST00000542340 FAM19A3Q7Z5A8 133 aa12.72□□□□□ -0.37
CACNA2D4-215ENST00000542340 SCGB3A1Q96QR1 104 aa12.72□□□□□ -0.37
CACNA2D4-215ENST00000542340 FLG2Q5D862 2391 aaPredicted RBP12.72□□□□□ -0.37
CACNA2D4-215ENST00000542340 RPL37AP61513 92 aaKnown RBP12.71□□□□□ -0.37
CACNA2D4-215ENST00000542340 LINC01561Q8N1V8 128 aa12.71□□□□□ -0.37
CACNA2D4-215ENST00000542340 LOC107984640A0A0U1RRK4 108 aa12.7□□□□□ -0.38
CACNA2D4-215ENST00000542340 RNF151Q2KHN1 245 aa12.7□□□□□ -0.38
CACNA2D4-215ENST00000542340 SMCO4Q9NRQ5 59 aa12.7□□□□□ -0.38
CACNA2D4-215ENST00000542340 SEC11AP67812 179 aa12.69□□□□□ -0.38
CACNA2D4-215ENST00000542340 STPG4Q8N801 248 aa12.69□□□□□ -0.38
CACNA2D4-215ENST00000542340 YPEL4Q96NS1 127 aa12.69□□□□□ -0.38
CACNA2D4-215ENST00000542340 MRPL35Q9NZE8 188 aaKnown RBP12.68□□□□□ -0.38
CACNA2D4-215ENST00000542340 NDUFA1O15239 70 aa12.67□□□□□ -0.38
CACNA2D4-215ENST00000542340 PTTG1IPP53801 180 aa12.67□□□□□ -0.38
CACNA2D4-215ENST00000542340 KIAA0087Q14695 138 aa12.67□□□□□ -0.38
CACNA2D4-215ENST00000542340 C18orf32Q8TCD1 76 aa12.67□□□□□ -0.38
CACNA2D4-215ENST00000542340 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.66□□□□□ -0.38
CACNA2D4-215ENST00000542340 HERVK_113P63121 156 aa12.66□□□□□ -0.38
CACNA2D4-215ENST00000542340 MYCBP2O75592 4640 aa12.66□□□□□ -0.38
CACNA2D4-215ENST00000542340 LINC00614P0C842 121 aa12.65□□□□□ -0.38
CACNA2D4-215ENST00000542340 GAGE2BQ13066 116 aa12.65□□□□□ -0.38
CACNA2D4-215ENST00000542340 A0A0J9YXV3 536 aa12.64□□□□□ -0.39
CACNA2D4-215ENST00000542340 C10orf25Q5T742 122 aa12.64□□□□□ -0.39
CACNA2D4-215ENST00000542340 UNQ6190/PRO20217Q6UXQ8 127 aa12.64□□□□□ -0.39
CACNA2D4-215ENST00000542340 SLC7A5P1Q8MH63 180 aa12.64□□□□□ -0.39
CACNA2D4-215ENST00000542340 C7orf33Q8WU49 177 aa12.64□□□□□ -0.39
CACNA2D4-215ENST00000542340 URB1-AS1Q96HZ7 61 aa12.64□□□□□ -0.39
CACNA2D4-215ENST00000542340 GEMIN7Q9H840 131 aaKnown RBP12.64□□□□□ -0.39
CACNA2D4-215ENST00000542340 CST9LQ9H4G1 147 aa12.62□□□□□ -0.39
CACNA2D4-215ENST00000542340 CDKN2A-AS1Q9UH64 79 aa12.62□□□□□ -0.39
CACNA2D4-215ENST00000542340 DMBT1Q9UGM3 2413 aaPredicted RBP12.62□□□□□ -0.39
CACNA2D4-215ENST00000542340 RAB5BP61020 215 aa12.61□□□□□ -0.39
CACNA2D4-215ENST00000542340 RPL18AQ02543 176 aaKnown RBP12.61□□□□□ -0.39
CACNA2D4-215ENST00000542340 PMVKQ15126 192 aa12.61□□□□□ -0.39
CACNA2D4-215ENST00000542340 CBLN2Q8IUK8 224 aa12.61□□□□□ -0.39
CACNA2D4-215ENST00000542340 C6orf48Q9UBA6 75 aa12.61□□□□□ -0.39
CACNA2D4-215ENST00000542340 A0A096LNJ9 63 aa12.6□□□□□ -0.39
CACNA2D4-215ENST00000542340 TINCRA0A1B0GVN0 87 aa12.6□□□□□ -0.39
CACNA2D4-215ENST00000542340 PRSS2P07478 247 aa12.6□□□□□ -0.39
CACNA2D4-215ENST00000542340 TLX1NBP0CAT3 122 aa12.6□□□□□ -0.39
CACNA2D4-215ENST00000542340 TRBV30A0A0K0K1B3 111 aa12.59□□□□□ -0.39
CACNA2D4-215ENST00000542340 C2orf82Q6UX34 121 aa12.59□□□□□ -0.39
CACNA2D4-215ENST00000542340 PACRGQ96M98 296 aaPredicted RBP12.59□□□□□ -0.39
CACNA2D4-215ENST00000542340 HBDP02042 147 aa12.58□□□□□ -0.4
CACNA2D4-215ENST00000542340 Q8IZM0 81 aa12.58□□□□□ -0.4
CACNA2D4-215ENST00000542340 LINC00469Q8N7U9 141 aa12.58□□□□□ -0.4
CACNA2D4-215ENST00000542340 IGLV5-45A0A087WSX0 123 aa12.57□□□□□ -0.4
CACNA2D4-215ENST00000542340 KRTAP29-1A8MX34 341 aaPredicted RBP12.57□□□□□ -0.4
CACNA2D4-215ENST00000542340 HNRNPA3P51991 378 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms