RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 Q6ZSV7 163 aa10.23□□□□□ -0.77
TRPM1-203ENST00000542188 C8orf87E5RJ46 101 aa10.23□□□□□ -0.77
TRPM1-203ENST00000542188 C1orf229Q6ZS94 237 aaPredicted RBP10.23□□□□□ -0.77
TRPM1-203ENST00000542188 PSMG3-AS1Q96PY0 264 aa10.23□□□□□ -0.77
TRPM1-203ENST00000542188 SPINT4Q6UDR6 99 aa10.22□□□□□ -0.77
TRPM1-203ENST00000542188 ACYP2P14621 99 aa10.22□□□□□ -0.77
TRPM1-203ENST00000542188 BCE1O60756 84 aa10.21□□□□□ -0.77
TRPM1-203ENST00000542188 ABCA4P78363 2273 aa10.21□□□□□ -0.77
TRPM1-203ENST00000542188 ZNF407Q9C0G0 2248 aa10.21□□□□□ -0.77
TRPM1-203ENST00000542188 EP300Q09472 2414 aaPredicted RBP10.21□□□□□ -0.78
TRPM1-203ENST00000542188 NUPR2A6NF83 97 aa10.2□□□□□ -0.78
TRPM1-203ENST00000542188 SBSPONQ8IVN8 264 aa10.2□□□□□ -0.78
TRPM1-203ENST00000542188 TANC1Q9C0D5 1861 aa10.2□□□□□ -0.78
TRPM1-203ENST00000542188 C6orf223Q8N319 242 aa10.2□□□□□ -0.78
TRPM1-203ENST00000542188 PRLHP81277 87 aa10.2□□□□□ -0.78
TRPM1-203ENST00000542188 LY6G6CO95867 125 aa10.2□□□□□ -0.78
TRPM1-203ENST00000542188 WNK2Q9Y3S1 2297 aa10.19□□□□□ -0.78
TRPM1-203ENST00000542188 THSD7BQ9C0I4 1608 aa10.19□□□□□ -0.78
TRPM1-203ENST00000542188 Q6ZTC4 211 aa10.19□□□□□ -0.78
TRPM1-203ENST00000542188 TP53AIP1Q9HCN2 124 aa10.19□□□□□ -0.78
TRPM1-203ENST00000542188 PKDREJQ9NTG1 2253 aa10.19□□□□□ -0.78
TRPM1-203ENST00000542188 RPS28P62857 69 aaKnown RBP10.18□□□□□ -0.78
TRPM1-203ENST00000542188 LINC00846Q9NV44 126 aa10.18□□□□□ -0.78
TRPM1-203ENST00000542188 CNOT1A5YKK6 2376 aaKnown RBP10.18□□□□□ -0.78
TRPM1-203ENST00000542188 GAS8-AS1O95177 125 aa10.18□□□□□ -0.78
TRPM1-203ENST00000542188 COX6A2Q02221 97 aa10.18□□□□□ -0.78
TRPM1-203ENST00000542188 C9orf116Q5BN46 136 aaPredicted RBP10.18□□□□□ -0.78
TRPM1-203ENST00000542188 Q6ZPA2 131 aa10.18□□□□□ -0.78
TRPM1-203ENST00000542188 ANAPC1Q9H1A4 1944 aa10.17□□□□□ -0.78
TRPM1-203ENST00000542188 PLA2G1BP04054 148 aaKnown RBP10.17□□□□□ -0.78
TRPM1-203ENST00000542188 LINC01561Q8N1V8 128 aa10.17□□□□□ -0.78
TRPM1-203ENST00000542188 TSPEAR-AS2P59090 65 aa10.16□□□□□ -0.78
TRPM1-203ENST00000542188 PLXNB3Q9ULL4 1909 aa10.16□□□□□ -0.78
TRPM1-203ENST00000542188 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
TRPM1-203ENST00000542188 IGLV5-52A0A0A0MRZ9 124 aa10.15□□□□□ -0.78
TRPM1-203ENST00000542188 ADAMTSL4-AS1Q5T5F5 129 aa10.15□□□□□ -0.78
TRPM1-203ENST00000542188 SMIM29Q86T20 159 aa10.15□□□□□ -0.78
TRPM1-203ENST00000542188 C2orf48Q96LS8 159 aa10.15□□□□□ -0.78
TRPM1-203ENST00000542188 DEFB116Q30KQ4 102 aa10.15□□□□□ -0.79
TRPM1-203ENST00000542188 LINC01556Q5JQF7 62 aa10.15□□□□□ -0.79
TRPM1-203ENST00000542188 AMELXQ99217 191 aa10.15□□□□□ -0.79
TRPM1-203ENST00000542188 SPTBN2O15020 2390 aa10.14□□□□□ -0.79
TRPM1-203ENST00000542188 USF3Q68DE3 2245 aa10.14□□□□□ -0.79
TRPM1-203ENST00000542188 H3BPC8 53 aa10.14□□□□□ -0.79
TRPM1-203ENST00000542188 DENND4CQ5VZ89 1909 aa10.13□□□□□ -0.79
TRPM1-203ENST00000542188 MALRD1Q5VYJ5 2156 aa10.13□□□□□ -0.79
TRPM1-203ENST00000542188 IGKV2D-30A0A075B6S6 120 aa10.13□□□□□ -0.79
TRPM1-203ENST00000542188 INAFM1C9JVW0 142 aa10.13□□□□□ -0.79
TRPM1-203ENST00000542188 IGKV2-30P06310 120 aa10.13□□□□□ -0.79
TRPM1-203ENST00000542188 C4orf26Q17RF5 130 aa10.13□□□□□ -0.79
TRPM1-203ENST00000542188 COL4A3Q01955 1670 aa10.13□□□□□ -0.79
TRPM1-203ENST00000542188 IGLV1-40P01703 118 aa10.12□□□□□ -0.79
TRPM1-203ENST00000542188 C10orf99Q6UWK7 81 aa10.12□□□□□ -0.79
TRPM1-203ENST00000542188 Q9UF83 564 aa10.12□□□□□ -0.79
TRPM1-203ENST00000542188 ARHGAP21Q5T5U3 1957 aa10.12□□□□□ -0.79
TRPM1-203ENST00000542188 ATP11AUNQ6ZP68 121 aa10.12□□□□□ -0.79
TRPM1-203ENST00000542188 URB1-AS1Q96HZ7 61 aa10.12□□□□□ -0.79
TRPM1-203ENST00000542188 C6orf48Q9UBA6 75 aa10.11□□□□□ -0.79
TRPM1-203ENST00000542188 FRMPD3Q5JV73 1810 aa10.11□□□□□ -0.79
TRPM1-203ENST00000542188 FSHBP01225 129 aa10.11□□□□□ -0.79
TRPM1-203ENST00000542188 DSCAML1Q8TD84 2053 aa10.11□□□□□ -0.79
TRPM1-203ENST00000542188 CDIP1Q9H305 208 aa10.1□□□□□ -0.79
TRPM1-203ENST00000542188 LINC00310P59036 64 aa10.1□□□□□ -0.79
TRPM1-203ENST00000542188 Q8N2B8 174 aa10.1□□□□□ -0.79
TRPM1-203ENST00000542188 IGLV4-60A0A075B6I1 120 aa10.09□□□□□ -0.79
TRPM1-203ENST00000542188 CRIP3Q6Q6R5 217 aa10.09□□□□□ -0.79
TRPM1-203ENST00000542188 ALPK3Q96L96 1907 aa10.08□□□□□ -0.8
TRPM1-203ENST00000542188 Q8NA96 180 aa10.08□□□□□ -0.8
TRPM1-203ENST00000542188 PRM2P04554 102 aa10.08□□□□□ -0.8
TRPM1-203ENST00000542188 A0A1B0GW54 56 aa10.08□□□□□ -0.8
TRPM1-203ENST00000542188 CACNA1GO43497 2377 aa10.07□□□□□ -0.8
TRPM1-203ENST00000542188 NOTCH4Q99466 2003 aa10.07□□□□□ -0.8
TRPM1-203ENST00000542188 LINC01006Q8NI28 216 aa10.07□□□□□ -0.8
TRPM1-203ENST00000542188 C11orf71Q6IPW1 123 aa10.06□□□□□ -0.8
TRPM1-203ENST00000542188 C19orf84I3L1E1 186 aa10.06□□□□□ -0.8
TRPM1-203ENST00000542188 A0A1B0GUV1 79 aa10.05□□□□□ -0.8
TRPM1-203ENST00000542188 C18orf65Q6ZTR6 163 aa10.05□□□□□ -0.8
TRPM1-203ENST00000542188 FHL2Q14192 279 aa10.05□□□□□ -0.8
TRPM1-203ENST00000542188 NUP210Q8TEM1 1887 aaPredicted RBP10.04□□□□□ -0.8
TRPM1-203ENST00000542188 MED13Q9UHV7 2174 aa10.04□□□□□ -0.8
TRPM1-203ENST00000542188 SPATA3Q8NHX4 192 aa10.04□□□□□ -0.8
TRPM1-203ENST00000542188 SMCR5Q8TEV8 140 aa10.04□□□□□ -0.8
TRPM1-203ENST00000542188 COL6A6A6NMZ7 2263 aa10.02□□□□□ -0.8
TRPM1-203ENST00000542188 NOTCH3Q9UM47 2321 aa10.02□□□□□ -0.8
TRPM1-203ENST00000542188 OXLD1Q5BKU9 147 aa10.02□□□□□ -0.81
TRPM1-203ENST00000542188 TMEM131Q92545 1883 aa10.02□□□□□ -0.81
TRPM1-203ENST00000542188 ACACAQ13085 2346 aa10.02□□□□□ -0.81
TRPM1-203ENST00000542188 LINC00337Q8N6G1 96 aa10.02□□□□□ -0.81
TRPM1-203ENST00000542188 CACNA1HO95180 2353 aa10.01□□□□□ -0.81
TRPM1-203ENST00000542188 LY6G6DO95868 133 aa10.01□□□□□ -0.81
TRPM1-203ENST00000542188 SPTAN1Q13813 2472 aaKnown RBP10.01□□□□□ -0.81
TRPM1-203ENST00000542188 KIAA0087Q14695 138 aa10.01□□□□□ -0.81
TRPM1-203ENST00000542188 ZNF580Q9UK33 172 aa10□□□□□ -0.81
TRPM1-203ENST00000542188 GTF3C1Q12789 2109 aa10□□□□□ -0.81
TRPM1-203ENST00000542188 COX8CQ7Z4L0 72 aa10□□□□□ -0.81
TRPM1-203ENST00000542188 A0A1W2PNU3 283 aaPredicted RBP9.99□□□□□ -0.81
TRPM1-203ENST00000542188 ODF3L2Q3SX64 289 aa9.99□□□□□ -0.81
TRPM1-203ENST00000542188 GPR179Q6PRD1 2367 aa9.98□□□□□ -0.81
TRPM1-203ENST00000542188 SSBP3-AS1Q7Z2R9 100 aa9.98□□□□□ -0.81
TRPM1-203ENST00000542188 C11orf72Q8NBR9 251 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms