RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 VAMP8Q9BV40 100 aa2.06□□□□□ -2.08
KNTC1-211ENST00000541427 MAP1LC3CQ9BXW4 147 aa2.06□□□□□ -2.08
KNTC1-211ENST00000541427 PRO1933Q9H354 126 aa2.06□□□□□ -2.08
KNTC1-211ENST00000541427 ST20Q9HBF5 79 aa2.06□□□□□ -2.08
KNTC1-211ENST00000541427 ZNF469Q96JG9 3925 aaPredicted RBP2.06□□□□□ -2.08
KNTC1-211ENST00000541427 NSD1Q96L73 2696 aaPredicted RBP2.06□□□□□ -2.08
KNTC1-211ENST00000541427 CSMD1Q96PZ7 3565 aa2.06□□□□□ -2.08
KNTC1-211ENST00000541427 VPS13CQ709C8 3753 aa2.06□□□□□ -2.08
KNTC1-211ENST00000541427 FN1P02751 2386 aaKnown RBP2.06□□□□□ -2.08
KNTC1-211ENST00000541427 SONP18583 2426 aaKnown RBP2.05□□□□□ -2.08
KNTC1-211ENST00000541427 MYO9AB2RTY4 2548 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 IGIPA6NJ69 53 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 A8MWV9 139 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 M0R2P5 195 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 TCAPO15273 167 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 DLEU1O43261 78 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 IGHV3-53P01767 116 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 SMIM17P0DL12 118 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 LINC00694P0DN24 101 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 CRYBA4P53673 196 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 DEFA6Q01524 100 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 SYCNQ0VAF6 134 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 RHOHQ15669 191 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 SPATA45Q537H7 98 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 CFAP126Q5VTH2 177 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 TMEM263Q8WUH6 116 aaKnown RBP2.05□□□□□ -2.08
KNTC1-211ENST00000541427 IFI27L1Q96BM0 104 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 RPL39LQ96EH5 51 aaKnown RBP2.05□□□□□ -2.08
KNTC1-211ENST00000541427 TIMM17AQ99595 171 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 SNHG12Q9BXW3 62 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 UQCR10Q9UDW1 63 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 HHLA3Q9XRX5 114 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 MRPS16Q9Y3D3 137 aaKnown RBP2.05□□□□□ -2.08
KNTC1-211ENST00000541427 ACANP16112 2415 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 HIVEP2P31629 2446 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 TLN2Q9Y4G6 2542 aa2.05□□□□□ -2.08
KNTC1-211ENST00000541427 HECTD1Q9ULT8 2610 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 A0A087WX48 190 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 TRBV10-1A0A0K0K1A3 114 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 LOC389332A0A1B0GUA5 103 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 SDHAF1A6NFY7 115 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 F8VRH5 84 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 H7C1H1 209 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 SIVA1O15304 175 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 MGPP08493 103 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 P0DMU3 169 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 FAM231AP0DMU4 169 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 FAM231CP0DMU5 169 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 COX8AP10176 69 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 G0S2P27469 103 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 FXYD7P58549 80 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 SEC61GP60059 68 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 NUTF2P61970 127 aaKnown RBP2.04□□□□□ -2.08
KNTC1-211ENST00000541427 KRTAP13-2Q52LG2 175 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 C2orf91Q6ZV80 131 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 BOD1L2Q8IYS8 172 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 DNAJC30Q96LL9 226 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 NBPF19A0A087WUL8 3843 aa2.04□□□□□ -2.08
KNTC1-211ENST00000541427 TRAV4A0A0B4J268 109 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 SMIM9A6NGZ8 99 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.03□□□□□ -2.08
KNTC1-211ENST00000541427 I3L3M4 83 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 M0R143 59 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 IGKCP01834 107 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 PLNP26678 52 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 ZNF56Q15929 161 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 SLC25A34Q6PIV7 304 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 NTM-AS1Q6ZSK4 140 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 FAM19A3Q7Z5A8 133 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 SBSPONQ8IVN8 264 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 ATOH7Q8N100 152 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 BAALCQ8WXS3 180 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 TMEM141Q96I45 108 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 AMELXQ99217 191 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 LINC01587Q99440 93 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 PMCHL2Q9BQD1 86 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 CHCHD7Q9BUK0 85 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 TIMM21Q9BVV7 248 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 WFDC10AQ9H1F0 79 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 MRPL16Q9NX20 251 aaKnown RBP2.03□□□□□ -2.08
KNTC1-211ENST00000541427 MRPL35Q9NZE8 188 aaKnown RBP2.03□□□□□ -2.08
KNTC1-211ENST00000541427 HIGD1BQ9P298 99 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 CYSLTR1Q9Y271 337 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 TP53TG1Q9Y2A0 90 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 GOLT1BQ9Y3E0 138 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 TIMM8BQ9Y5J9 83 aaPredicted RBP2.03□□□□□ -2.08
KNTC1-211ENST00000541427 MTORP42345 2549 aa2.03□□□□□ -2.08
KNTC1-211ENST00000541427 ZFHX3Q15911 3703 aa2.03□□□□□ -2.09
KNTC1-211ENST00000541427 HIVEP1P15822 2718 aa2.03□□□□□ -2.09
KNTC1-211ENST00000541427 SETXQ7Z333 2677 aaKnown RBP2.03□□□□□ -2.09
KNTC1-211ENST00000541427 C2CD3Q4AC94 2353 aa2.02□□□□□ -2.09
KNTC1-211ENST00000541427 IGKV2D-26A0A0A0MRZ7 120 aa2.02□□□□□ -2.09
KNTC1-211ENST00000541427 TRBV6-4A0A1B0GX49 114 aa2.02□□□□□ -2.09
KNTC1-211ENST00000541427 C11orf86A6NJI1 115 aa2.02□□□□□ -2.09
KNTC1-211ENST00000541427 DPM2O94777 84 aa2.02□□□□□ -2.09
KNTC1-211ENST00000541427 PRM2P04554 102 aa2.02□□□□□ -2.09
KNTC1-211ENST00000541427 UBE2D3P61077 147 aa2.02□□□□□ -2.09
KNTC1-211ENST00000541427 UBE2D2P62837 147 aa2.02□□□□□ -2.09
KNTC1-211ENST00000541427 MRPS36P82909 103 aaKnown RBP2.02□□□□□ -2.09
KNTC1-211ENST00000541427 COTL1Q14019 142 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms