RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 G0S2P27469 103 aa8.37□□□□□ -1.07
LTBR-208ENST00000541005 SPACA4Q8TDM5 124 aa8.37□□□□□ -1.07
LTBR-208ENST00000541005 ALKBH7Q9BT30 221 aaPredicted RBP8.37□□□□□ -1.07
LTBR-208ENST00000541005 IGIPA6NJ69 53 aa8.36□□□□□ -1.07
LTBR-208ENST00000541005 ZNF561-AS1K7EIQ3 104 aa8.36□□□□□ -1.07
LTBR-208ENST00000541005 PLA2G1BP04054 148 aaKnown RBP8.36□□□□□ -1.07
LTBR-208ENST00000541005 CARD19Q96LW7 228 aa8.36□□□□□ -1.07
LTBR-208ENST00000541005 AMELXQ99217 191 aa8.36□□□□□ -1.07
LTBR-208ENST00000541005 MRPL18Q9H0U6 180 aaKnown RBP8.36□□□□□ -1.07
LTBR-208ENST00000541005 PKIGQ9Y2B9 76 aa8.36□□□□□ -1.07
LTBR-208ENST00000541005 APOMO95445 188 aa8.35□□□□□ -1.07
LTBR-208ENST00000541005 INAFM2P0DMQ5 153 aa8.35□□□□□ -1.07
LTBR-208ENST00000541005 TEX43Q6ZNM6 134 aa8.35□□□□□ -1.07
LTBR-208ENST00000541005 LINC00173Q6ZV60 143 aa8.35□□□□□ -1.07
LTBR-208ENST00000541005 C5orf38Q86SI9 138 aa8.35□□□□□ -1.07
LTBR-208ENST00000541005 OR10D4PQ8NGN7 298 aa8.35□□□□□ -1.07
LTBR-208ENST00000541005 LINC00526Q96FQ7 95 aa8.35□□□□□ -1.07
LTBR-208ENST00000541005 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 TGIF2-C20orf24A0A0A6YYL0 155 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 CHTF8P0CG12 524 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 UBE2D1P51668 147 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
LTBR-208ENST00000541005 COX6A2Q02221 97 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 SYCNQ0VAF6 134 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 LINC00242Q5T6M2 205 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 Q6ZN92 141 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 PRSS3P2Q8NHM4 247 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 TOMM6Q96B49 74 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 C2orf48Q96LS8 159 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 C2orf88Q9BSF0 95 aa8.34□□□□□ -1.07
LTBR-208ENST00000541005 DMBT1Q9UGM3 2413 aaPredicted RBP8.34□□□□□ -1.07
LTBR-208ENST00000541005 A0A087WZ39 114 aa8.33□□□□□ -1.08
LTBR-208ENST00000541005 LINC01549A6NIU2 74 aa8.33□□□□□ -1.08
LTBR-208ENST00000541005 F8WDY8 70 aa8.33□□□□□ -1.08
LTBR-208ENST00000541005 FABP9Q0Z7S8 132 aa8.33□□□□□ -1.08
LTBR-208ENST00000541005 FAM19A3Q7Z5A8 133 aa8.33□□□□□ -1.08
LTBR-208ENST00000541005 YPEL4Q96NS1 127 aa8.33□□□□□ -1.08
LTBR-208ENST00000541005 PLAC8Q9NZF1 115 aa8.33□□□□□ -1.08
LTBR-208ENST00000541005 A0A087WYN8 130 aa8.32□□□□□ -1.08
LTBR-208ENST00000541005 SPAG11BQ08648 103 aa8.32□□□□□ -1.08
LTBR-208ENST00000541005 PAPPA-AS1Q5QFB9 102 aa8.32□□□□□ -1.08
LTBR-208ENST00000541005 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
LTBR-208ENST00000541005 VCX2Q9H322 139 aa8.32□□□□□ -1.08
LTBR-208ENST00000541005 A0A096LNI7 61 aa8.31□□□□□ -1.08
LTBR-208ENST00000541005 Q6ZRU5 148 aa8.31□□□□□ -1.08
LTBR-208ENST00000541005 ERASQ7Z444 233 aa8.31□□□□□ -1.08
LTBR-208ENST00000541005 ORAOV1Q8WV07 137 aa8.31□□□□□ -1.08
LTBR-208ENST00000541005 CAMK2N2Q96S95 79 aa8.31□□□□□ -1.08
LTBR-208ENST00000541005 LINC00474Q9P2X8 69 aa8.31□□□□□ -1.08
LTBR-208ENST00000541005 TRAPPC1Q9Y5R8 145 aa8.31□□□□□ -1.08
LTBR-208ENST00000541005 RNF151Q2KHN1 245 aa8.3□□□□□ -1.08
LTBR-208ENST00000541005 IGKV2-24A0A0C4DH68 120 aa8.29□□□□□ -1.08
LTBR-208ENST00000541005 ZC2HC1BQ5TFG8 222 aa8.29□□□□□ -1.08
LTBR-208ENST00000541005 FA2HQ7L5A8 372 aa8.29□□□□□ -1.08
LTBR-208ENST00000541005 C18orf32Q8TCD1 76 aa8.29□□□□□ -1.08
LTBR-208ENST00000541005 MRPL35Q9NZE8 188 aaKnown RBP8.29□□□□□ -1.08
LTBR-208ENST00000541005 LOC107984640A0A0U1RRK4 108 aa8.28□□□□□ -1.08
LTBR-208ENST00000541005 PTTG1IPP53801 180 aa8.28□□□□□ -1.08
LTBR-208ENST00000541005 RPL37AP61513 92 aaKnown RBP8.28□□□□□ -1.08
LTBR-208ENST00000541005 SEC11AP67812 179 aa8.28□□□□□ -1.08
LTBR-208ENST00000541005 MAJINQ3KP22 176 aa8.28□□□□□ -1.08
LTBR-208ENST00000541005 SCGB3A1Q96QR1 104 aa8.28□□□□□ -1.08
LTBR-208ENST00000541005 SMCO4Q9NRQ5 59 aa8.28□□□□□ -1.08
LTBR-208ENST00000541005 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.27□□□□□ -1.09
LTBR-208ENST00000541005 KIAA0087Q14695 138 aa8.27□□□□□ -1.09
LTBR-208ENST00000541005 URB1-AS1Q96HZ7 61 aa8.27□□□□□ -1.09
LTBR-208ENST00000541005 NDUFA1O15239 70 aa8.26□□□□□ -1.09
LTBR-208ENST00000541005 HERVK_113P63121 156 aa8.26□□□□□ -1.09
LTBR-208ENST00000541005 STPG4Q8N801 248 aa8.26□□□□□ -1.09
LTBR-208ENST00000541005 DPH3Q96FX2 82 aa8.26□□□□□ -1.09
LTBR-208ENST00000541005 A0A096LNJ9 63 aa8.25□□□□□ -1.09
LTBR-208ENST00000541005 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
LTBR-208ENST00000541005 LINC00614P0C842 121 aa8.24□□□□□ -1.09
LTBR-208ENST00000541005 TLX1NBP0CAT3 122 aa8.24□□□□□ -1.09
LTBR-208ENST00000541005 C10orf25Q5T742 122 aa8.24□□□□□ -1.09
LTBR-208ENST00000541005 CBLN2Q8IUK8 224 aa8.24□□□□□ -1.09
LTBR-208ENST00000541005 SLC7A5P1Q8MH63 180 aa8.24□□□□□ -1.09
LTBR-208ENST00000541005 CST9LQ9H4G1 147 aa8.24□□□□□ -1.09
LTBR-208ENST00000541005 GEMIN7Q9H840 131 aaKnown RBP8.24□□□□□ -1.09
LTBR-208ENST00000541005 MYCBP2O75592 4640 aa8.24□□□□□ -1.09
LTBR-208ENST00000541005 A0A0J9YXV3 536 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 TRBV30A0A0K0K1B3 111 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 TINCRA0A1B0GVN0 87 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 HBDP02042 147 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 RAB5BP61020 215 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 PMVKQ15126 192 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 UNQ6190/PRO20217Q6UXQ8 127 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 C7orf33Q8WU49 177 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 C6orf48Q9UBA6 75 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 CDKN2A-AS1Q9UH64 79 aa8.23□□□□□ -1.09
LTBR-208ENST00000541005 GAGE2BQ13066 116 aa8.22□□□□□ -1.09
LTBR-208ENST00000541005 Q8IZM0 81 aa8.22□□□□□ -1.09
LTBR-208ENST00000541005 RPL18AQ02543 176 aaKnown RBP8.21□□□□□ -1.1
LTBR-208ENST00000541005 PDZD11Q5EBL8 140 aa8.21□□□□□ -1.1
LTBR-208ENST00000541005 KRTAP29-1A8MX34 341 aaPredicted RBP8.2□□□□□ -1.1
LTBR-208ENST00000541005 SMIM1B2RUZ4 78 aa8.2□□□□□ -1.1
LTBR-208ENST00000541005 PRSS2P07478 247 aa8.2□□□□□ -1.1
LTBR-208ENST00000541005 HNRNPA3P51991 378 aaKnown RBP8.2□□□□□ -1.1
LTBR-208ENST00000541005 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms