RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 NPYP01303 97 aa8.14□□□□□ -1.11
SEMA4D-223ENST00000540475 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
SEMA4D-223ENST00000540475 OR10D4PQ8NGN7 298 aa8.14□□□□□ -1.11
SEMA4D-223ENST00000540475 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.13□□□□□ -1.11
SEMA4D-223ENST00000540475 C5orf38Q86SI9 138 aa8.13□□□□□ -1.11
SEMA4D-223ENST00000540475 CAMK2N2Q96S95 79 aa8.13□□□□□ -1.11
SEMA4D-223ENST00000540475 PYGO1Q9Y3Y4 419 aa8.13□□□□□ -1.11
SEMA4D-223ENST00000540475 LRP2P98164 4655 aa8.12□□□□□ -1.11
SEMA4D-223ENST00000540475 A0A1W2PNN7 141 aa8.12□□□□□ -1.11
SEMA4D-223ENST00000540475 Q6ZRP5 223 aa8.12□□□□□ -1.11
SEMA4D-223ENST00000540475 ORMDL3Q8N138 153 aa8.12□□□□□ -1.11
SEMA4D-223ENST00000540475 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
SEMA4D-223ENST00000540475 KRTAP10-8P60410 259 aa8.11□□□□□ -1.11
SEMA4D-223ENST00000540475 PNRC1Q12796 327 aaPredicted RBP8.11□□□□□ -1.11
SEMA4D-223ENST00000540475 TMEM136Q6ZRR5 245 aa8.11□□□□□ -1.11
SEMA4D-223ENST00000540475 OPRPNQ99935 248 aaPredicted RBP8.11□□□□□ -1.11
SEMA4D-223ENST00000540475 LAMTOR2Q9Y2Q5 125 aa8.11□□□□□ -1.11
SEMA4D-223ENST00000540475 A0A0J9YXV3 536 aa8.1□□□□□ -1.11
SEMA4D-223ENST00000540475 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
SEMA4D-223ENST00000540475 SPAG11BQ08648 103 aa8.1□□□□□ -1.11
SEMA4D-223ENST00000540475 GAGE2BQ13066 116 aa8.1□□□□□ -1.11
SEMA4D-223ENST00000540475 PRELID3AQ96N28 172 aa8.1□□□□□ -1.11
SEMA4D-223ENST00000540475 ANAPC16Q96DE5 110 aa8.09□□□□□ -1.11
SEMA4D-223ENST00000540475 IGLV4-3A0A075B6K6 122 aa8.08□□□□□ -1.12
SEMA4D-223ENST00000540475 A0A087WZ39 114 aa8.08□□□□□ -1.12
SEMA4D-223ENST00000540475 KIAA0087Q14695 138 aa8.08□□□□□ -1.12
SEMA4D-223ENST00000540475 C9orf116Q5BN46 136 aaPredicted RBP8.08□□□□□ -1.12
SEMA4D-223ENST00000540475 ORAOV1Q8WV07 137 aa8.08□□□□□ -1.12
SEMA4D-223ENST00000540475 IFITM10A6NMD0 228 aa8.07□□□□□ -1.12
SEMA4D-223ENST00000540475 RAB5AP20339 215 aa8.07□□□□□ -1.12
SEMA4D-223ENST00000540475 IFI27P40305 119 aaPredicted RBP8.07□□□□□ -1.12
SEMA4D-223ENST00000540475 LINC00242Q5T6M2 205 aa8.07□□□□□ -1.12
SEMA4D-223ENST00000540475 REG3GQ6UW15 175 aa8.07□□□□□ -1.12
SEMA4D-223ENST00000540475 LINC01561Q8N1V8 128 aa8.07□□□□□ -1.12
SEMA4D-223ENST00000540475 IMMP2LQ96T52 175 aa8.07□□□□□ -1.12
SEMA4D-223ENST00000540475 K7EMI3 77 aa8.06□□□□□ -1.12
SEMA4D-223ENST00000540475 NDUFA1O15239 70 aa8.06□□□□□ -1.12
SEMA4D-223ENST00000540475 MT-ND4LP03901 98 aa8.06□□□□□ -1.12
SEMA4D-223ENST00000540475 NPSP0C0P6 89 aa8.06□□□□□ -1.12
SEMA4D-223ENST00000540475 C10orf25Q5T742 122 aa8.06□□□□□ -1.12
SEMA4D-223ENST00000540475 Q8N8P6 123 aa8.06□□□□□ -1.12
SEMA4D-223ENST00000540475 PSORS1C2Q9UIG4 136 aa8.06□□□□□ -1.12
SEMA4D-223ENST00000540475 UBE2D1P51668 147 aa8.05□□□□□ -1.12
SEMA4D-223ENST00000540475 FAM19A3Q7Z5A8 133 aa8.05□□□□□ -1.12
SEMA4D-223ENST00000540475 TMEM141Q96I45 108 aa8.05□□□□□ -1.12
SEMA4D-223ENST00000540475 AMELXQ99217 191 aa8.05□□□□□ -1.12
SEMA4D-223ENST00000540475 MAP1LC3AQ9H492 121 aa8.05□□□□□ -1.12
SEMA4D-223ENST00000540475 C6orf48Q9UBA6 75 aa8.05□□□□□ -1.12
SEMA4D-223ENST00000540475 TGIF2-C20orf24A0A0A6YYL0 155 aa8.04□□□□□ -1.12
SEMA4D-223ENST00000540475 RPL18AQ02543 176 aaKnown RBP8.04□□□□□ -1.12
SEMA4D-223ENST00000540475 UNQ6190/PRO20217Q6UXQ8 127 aa8.04□□□□□ -1.12
SEMA4D-223ENST00000540475 LOC389332A0A1B0GUA5 103 aa8.03□□□□□ -1.12
SEMA4D-223ENST00000540475 IGIPA6NJ69 53 aa8.03□□□□□ -1.12
SEMA4D-223ENST00000540475 RAB14P61106 215 aa8.03□□□□□ -1.12
SEMA4D-223ENST00000540475 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
SEMA4D-223ENST00000540475 LINC00173Q6ZV60 143 aa8.03□□□□□ -1.12
SEMA4D-223ENST00000540475 PHF5AQ7RTV0 110 aaKnown RBP8.03□□□□□ -1.12
SEMA4D-223ENST00000540475 TRBV30A0A0K0K1B3 111 aa8.02□□□□□ -1.13
SEMA4D-223ENST00000540475 ORMDL2Q53FV1 153 aa8.02□□□□□ -1.13
SEMA4D-223ENST00000540475 C2orf66Q6UXQ4 117 aa8.02□□□□□ -1.13
SEMA4D-223ENST00000540475 TEX43Q6ZNM6 134 aa8.02□□□□□ -1.13
SEMA4D-223ENST00000540475 KRTAP7-1Q8IUC3 87 aa8.02□□□□□ -1.13
SEMA4D-223ENST00000540475 CYSLTR1Q9Y271 337 aa8.02□□□□□ -1.13
SEMA4D-223ENST00000540475 FAM168BA1KXE4 195 aa8□□□□□ -1.13
SEMA4D-223ENST00000540475 MT-ND6P03923 174 aa8□□□□□ -1.13
SEMA4D-223ENST00000540475 KRTAP11-1Q8IUC1 163 aa8□□□□□ -1.13
SEMA4D-223ENST00000540475 C2orf88Q9BSF0 95 aa8□□□□□ -1.13
SEMA4D-223ENST00000540475 NXT2Q9NPJ8 142 aaKnown RBP8□□□□□ -1.13
SEMA4D-223ENST00000540475 NDUFC2-KCTD14E9PQ53 114 aa7.99□□□□□ -1.13
SEMA4D-223ENST00000540475 ODF1Q14990 250 aa7.99□□□□□ -1.13
SEMA4D-223ENST00000540475 C1orf137Q5JT78 98 aa7.99□□□□□ -1.13
SEMA4D-223ENST00000540475 ZC2HC1BQ5TFG8 222 aa7.99□□□□□ -1.13
SEMA4D-223ENST00000540475 VCX2Q9H322 139 aa7.99□□□□□ -1.13
SEMA4D-223ENST00000540475 TRAV9-1A0A075B6T8 112 aa7.98□□□□□ -1.13
SEMA4D-223ENST00000540475 IGLV7-43P04211 117 aa7.98□□□□□ -1.13
SEMA4D-223ENST00000540475 ADCYAP1P18509 176 aa7.98□□□□□ -1.13
SEMA4D-223ENST00000540475 G0S2P27469 103 aa7.98□□□□□ -1.13
SEMA4D-223ENST00000540475 UQCC3Q6UW78 93 aa7.98□□□□□ -1.13
SEMA4D-223ENST00000540475 Q6ZN92 141 aa7.98□□□□□ -1.13
SEMA4D-223ENST00000540475 CTDSP1Q9GZU7 261 aa7.98□□□□□ -1.13
SEMA4D-223ENST00000540475 RNF213Q63HN8 5207 aa7.98□□□□□ -1.13
SEMA4D-223ENST00000540475 C2orf82Q6UX34 121 aa7.97□□□□□ -1.13
SEMA4D-223ENST00000540475 TOMM6Q96B49 74 aa7.97□□□□□ -1.13
SEMA4D-223ENST00000540475 TIMM17AQ99595 171 aa7.97□□□□□ -1.13
SEMA4D-223ENST00000540475 LPAP08519 4548 aa7.97□□□□□ -1.13
SEMA4D-223ENST00000540475 TMEM218A2RU14 115 aa7.96□□□□□ -1.14
SEMA4D-223ENST00000540475 LINC01546A6NGU7 62 aa7.96□□□□□ -1.14
SEMA4D-223ENST00000540475 GAGE2EQ4V326 116 aa7.96□□□□□ -1.14
SEMA4D-223ENST00000540475 PAPPA-AS1Q5QFB9 102 aa7.96□□□□□ -1.14
SEMA4D-223ENST00000540475 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.14
SEMA4D-223ENST00000540475 Q8IZM0 81 aa7.96□□□□□ -1.14
SEMA4D-223ENST00000540475 PACRGQ96M98 296 aaPredicted RBP7.96□□□□□ -1.14
SEMA4D-223ENST00000540475 GAGE2DQ9UEU5 116 aa7.96□□□□□ -1.14
SEMA4D-223ENST00000540475 HERVK_113P63121 156 aa7.95□□□□□ -1.14
SEMA4D-223ENST00000540475 SEC11AP67812 179 aa7.95□□□□□ -1.14
SEMA4D-223ENST00000540475 DIRC1Q969H9 104 aa7.95□□□□□ -1.14
SEMA4D-223ENST00000540475 H0Y9J4 135 aa7.94□□□□□ -1.14
SEMA4D-223ENST00000540475 IFITM2Q01629 132 aa7.94□□□□□ -1.14
SEMA4D-223ENST00000540475 ERASQ7Z444 233 aa7.94□□□□□ -1.14
SEMA4D-223ENST00000540475 FAM19A5Q7Z5A7 132 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms