RNA–Protein interactions for RNA: ENST00000540412.1

NPIPB2-205, Transcript of nuclear pore complex interacting protein family, member B2, human

TSL 3

Gene NPIPB2, Length 389 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB2-205	ENST00000540412	MED13L	Q71F56	2210 aa		4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	IBA57-AS1	B1ANH7	110 aa		4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	JMJD7-PLA2G4B	H0Y9G9	81 aa		4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	LY6G6D	O95868	133 aa		4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	UCN	P55089	124 aa		4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	HRCT1	Q6UXD1	115 aa		4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	NTM-AS1	Q6ZSK4	140 aa		4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	UBE2E2	Q96LR5	201 aa		4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	CCL19	Q99731	98 aa		4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	HELZ2	Q9BYK8	2649 aa	Known RBP	4.69	□□□□□ -1.66
NPIPB2-205	ENST00000540412	USP9X	Q93008	2570 aa	Predicted RBP	4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412	PCNX1	Q96RV3	2341 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412	TRAV23DV6	A0A075B6W5	121 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412	SLPI	P03973	132 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412	HILS1	P60008	231 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412	FHL2	Q14192	279 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412	DEFB112	Q30KQ8	113 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412		Q5XG85	94 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412		Q96MF0	132 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412	LINC00167	Q96N53	147 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412	ITPR1	Q14643	2758 aa		4.68	□□□□□ -1.66
NPIPB2-205	ENST00000540412	IGHV4-30-2	A0A087WSY4	118 aa		4.67	□□□□□ -1.66
NPIPB2-205	ENST00000540412	IGKV3OR2-268	A0A0C4DH90	116 aa		4.67	□□□□□ -1.66
NPIPB2-205	ENST00000540412	TRBV6-4	A0A1B0GX49	114 aa		4.67	□□□□□ -1.66
NPIPB2-205	ENST00000540412	PFN2	P35080	140 aa		4.67	□□□□□ -1.66
NPIPB2-205	ENST00000540412	C4orf26	Q17RF5	130 aa		4.67	□□□□□ -1.66
NPIPB2-205	ENST00000540412	TMEM86B	Q8N661	226 aa		4.67	□□□□□ -1.66
NPIPB2-205	ENST00000540412	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.67	□□□□□ -1.66
NPIPB2-205	ENST00000540412	HRNR	Q86YZ3	2850 aa	Predicted RBP	4.67	□□□□□ -1.66
NPIPB2-205	ENST00000540412	WNK2	Q9Y3S1	2297 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	TRBV10-3	A0A0K0K1G6	114 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412		B4DSR2	109 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	C19orf84	I3L1E1	186 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	DEFB136	Q30KP8	78 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	STH	Q8IWL8	128 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	C11orf44	Q8N8P7	122 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	MRAP	Q8TCY5	172 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	UBL5	Q9BZL1	73 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	C11orf68	Q9H3H3	251 aa	Known RBP	4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	ZNF702P	Q9H963	129 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	XCL2	Q9UBD3	114 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	SERP1	Q9Y6X1	66 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	EP300	Q09472	2414 aa	Predicted RBP	4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	DMXL2	Q8TDJ6	3036 aa		4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	RP1L1	Q8IWN7	2480 aa	Predicted RBP	4.66	□□□□□ -1.66
NPIPB2-205	ENST00000540412	KALRN	O60229	2985 aa		4.65	□□□□□ -1.66
NPIPB2-205	ENST00000540412	DOPEY2	Q9Y3R5	2298 aa		4.65	□□□□□ -1.66
NPIPB2-205	ENST00000540412	ZNF462	Q96JM2	2506 aa		4.65	□□□□□ -1.66
NPIPB2-205	ENST00000540412	OTOGL	Q3ZCN5	2332 aa		4.65	□□□□□ -1.66
NPIPB2-205	ENST00000540412	BCE1	O60756	84 aa		4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412	AVP	P01185	164 aa		4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412	XCL1	P47992	114 aa		4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412	KHDC1L	Q5JSQ8	128 aa		4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412	ENHO	Q6UWT2	76 aa		4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412		Q6ZTI0	123 aa		4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412	C1orf158	Q8N1D5	194 aa		4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412	C20orf197	Q8N268	126 aa		4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412	WFDC9	Q8NEX5	89 aa		4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412	ANKRD17	O75179	2603 aa	Known RBP	4.65	□□□□□ -1.67
NPIPB2-205	ENST00000540412	CNOT1	A5YKK6	2376 aa	Known RBP	4.64	□□□□□ -1.67
NPIPB2-205	ENST00000540412	TRAV7	A0A075B6U4	112 aa		4.64	□□□□□ -1.67
NPIPB2-205	ENST00000540412		A0A087WZ39	114 aa		4.64	□□□□□ -1.67
NPIPB2-205	ENST00000540412	TMEM256-PLSCR3	K7ERE1	68 aa		4.64	□□□□□ -1.67
NPIPB2-205	ENST00000540412	SS18	Q15532	418 aa		4.64	□□□□□ -1.67
NPIPB2-205	ENST00000540412	C18orf65	Q6ZTR6	163 aa		4.64	□□□□□ -1.67
NPIPB2-205	ENST00000540412	FAM19A1	Q7Z5A9	133 aa		4.64	□□□□□ -1.67
NPIPB2-205	ENST00000540412		Q8N814	137 aa		4.64	□□□□□ -1.67
NPIPB2-205	ENST00000540412	C4orf3	Q8WVX3	66 aa		4.64	□□□□□ -1.67
NPIPB2-205	ENST00000540412	LAMA5	O15230	3695 aa		4.63	□□□□□ -1.67
NPIPB2-205	ENST00000540412	TRGV4	A0A0C4DH28	118 aa		4.63	□□□□□ -1.67
NPIPB2-205	ENST00000540412	LOC100131303	A0A0U1RQF7	123 aa		4.63	□□□□□ -1.67
NPIPB2-205	ENST00000540412		J3QLI3	93 aa		4.63	□□□□□ -1.67
NPIPB2-205	ENST00000540412	LYPD5	Q6UWN5	251 aa		4.63	□□□□□ -1.67
NPIPB2-205	ENST00000540412	LINC01356	Q8N9X3	169 aa		4.63	□□□□□ -1.67
NPIPB2-205	ENST00000540412	C16orf74	Q96GX8	76 aa		4.63	□□□□□ -1.67
NPIPB2-205	ENST00000540412	IGSF10	Q6WRI0	2623 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	IGLV4-60	A0A075B6I1	120 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	TRGV2	A0A075B6R0	118 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412		A0A1W2PRX2	142 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	ZNF561-AS1	K7EIQ3	104 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	DSCR9	P59020	149 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	DEFB114	Q30KQ6	69 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	ODF3L2	Q3SX64	289 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	C6orf226	Q5I0X4	101 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412		Q8IZM0	81 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	NOP10	Q9NPE3	64 aa	Known RBP	4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	AKAP13	Q12802	2813 aa		4.62	□□□□□ -1.67
NPIPB2-205	ENST00000540412	DCHS2	Q6V1P9	2916 aa		4.61	□□□□□ -1.67
NPIPB2-205	ENST00000540412	LOC110117498	A0A087WWA1	95 aa		4.61	□□□□□ -1.67
NPIPB2-205	ENST00000540412	TRBV6-8	A0A0A6YYG3	113 aa		4.61	□□□□□ -1.67
NPIPB2-205	ENST00000540412	EPM2A	B3EWF7	344 aa		4.61	□□□□□ -1.67
NPIPB2-205	ENST00000540412	RNASE1	P07998	156 aa	Known RBP	4.61	□□□□□ -1.67
NPIPB2-205	ENST00000540412	ATP5E	P56381	51 aa	Predicted RBP	4.61	□□□□□ -1.67
NPIPB2-205	ENST00000540412	LINC00482	Q8N8I6	264 aa		4.61	□□□□□ -1.67
NPIPB2-205	ENST00000540412	RELN	P78509	3460 aa		4.6	□□□□□ -1.67
NPIPB2-205	ENST00000540412	SPTBN1	Q01082	2364 aa	Known RBP	4.6	□□□□□ -1.67
NPIPB2-205	ENST00000540412	SMIM26	A0A096LP01	95 aa		4.6	□□□□□ -1.67
NPIPB2-205	ENST00000540412	LINC00959	A0A1B0GUT2	108 aa		4.6	□□□□□ -1.67
NPIPB2-205	ENST00000540412		H7BZZ5	65 aa		4.6	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms