RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 TIRAPP58753 221 aa10.66□□□□□ -0.7
DDB1-216ENST00000539739 SUMO2P61956 95 aaKnown RBP10.66□□□□□ -0.7
DDB1-216ENST00000539739 NAA38Q9BRA0 125 aaKnown RBP10.66□□□□□ -0.7
DDB1-216ENST00000539739 PPDPFQ9H3Y8 114 aa10.66□□□□□ -0.7
DDB1-216ENST00000539739 TENM2Q9NT68 2774 aa10.65□□□□□ -0.7
DDB1-216ENST00000539739 IGHV3-38A0A0C4DH36 116 aa10.65□□□□□ -0.7
DDB1-216ENST00000539739 TEN1Q86WV5 123 aa10.65□□□□□ -0.7
DDB1-216ENST00000539739 J3KT08 172 aa10.64□□□□□ -0.71
DDB1-216ENST00000539739 NPYP01303 97 aa10.64□□□□□ -0.71
DDB1-216ENST00000539739 CEND1Q8N111 149 aa10.64□□□□□ -0.71
DDB1-216ENST00000539739 CCDC179H3BU77 68 aa10.63□□□□□ -0.71
DDB1-216ENST00000539739 VCYO14598 125 aa10.63□□□□□ -0.71
DDB1-216ENST00000539739 SNCGO76070 127 aa10.63□□□□□ -0.71
DDB1-216ENST00000539739 POLR2KP53803 58 aaKnown RBP10.63□□□□□ -0.71
DDB1-216ENST00000539739 LINC00588Q9Y4M8 146 aa10.63□□□□□ -0.71
DDB1-216ENST00000539739 I3L3M4 83 aa10.62□□□□□ -0.71
DDB1-216ENST00000539739 LELP1Q5T871 98 aa10.62□□□□□ -0.71
DDB1-216ENST00000539739 PLECQ15149 4684 aaKnown RBP10.62□□□□□ -0.71
DDB1-216ENST00000539739 TRBV27A0A0K0K1C4 114 aa10.62□□□□□ -0.71
DDB1-216ENST00000539739 MEIG1Q5JSS6 88 aa10.62□□□□□ -0.71
DDB1-216ENST00000539739 LINC00173Q6ZV60 143 aa10.62□□□□□ -0.71
DDB1-216ENST00000539739 TRBV6-8A0A0A6YYG3 113 aa10.61□□□□□ -0.71
DDB1-216ENST00000539739 KIR2DL4Q99706 377 aa10.61□□□□□ -0.71
DDB1-216ENST00000539739 AP5S1Q9NUS5 200 aa10.61□□□□□ -0.71
DDB1-216ENST00000539739 LY6G6CO95867 125 aa10.6□□□□□ -0.71
DDB1-216ENST00000539739 FXYD2P54710 66 aa10.6□□□□□ -0.71
DDB1-216ENST00000539739 UPK3BQ9BT76 320 aa10.6□□□□□ -0.71
DDB1-216ENST00000539739 CHAC1Q9BUX1 264 aa10.6□□□□□ -0.71
DDB1-216ENST00000539739 SMIM2Q9BVW6 85 aa10.6□□□□□ -0.71
DDB1-216ENST00000539739 TRBV25-1A0A075B6N4 114 aa10.59□□□□□ -0.71
DDB1-216ENST00000539739 LOC389332A0A1B0GUA5 103 aa10.59□□□□□ -0.71
DDB1-216ENST00000539739 FCER1GP30273 86 aa10.59□□□□□ -0.71
DDB1-216ENST00000539739 LINC00476Q8WZB0 136 aa10.59□□□□□ -0.71
DDB1-216ENST00000539739 NTM-AS1Q6ZSK4 140 aa10.58□□□□□ -0.72
DDB1-216ENST00000539739 DEFB104AQ8WTQ1 72 aa10.58□□□□□ -0.72
DDB1-216ENST00000539739 TRBV20-1A0A075B6N2 111 aa10.58□□□□□ -0.72
DDB1-216ENST00000539739 NXT2Q9NPJ8 142 aaKnown RBP10.58□□□□□ -0.72
DDB1-216ENST00000539739 NHP2Q9NX24 153 aaKnown RBP10.58□□□□□ -0.72
DDB1-216ENST00000539739 CHCHD5Q9BSY4 110 aa10.57□□□□□ -0.72
DDB1-216ENST00000539739 TMEM243Q9BU79 118 aa10.57□□□□□ -0.72
DDB1-216ENST00000539739 TSHBP01222 138 aa10.56□□□□□ -0.72
DDB1-216ENST00000539739 Q8N8P6 123 aa10.56□□□□□ -0.72
DDB1-216ENST00000539739 PRSS3P2Q8NHM4 247 aa10.56□□□□□ -0.72
DDB1-216ENST00000539739 Q9H8V8 135 aa10.56□□□□□ -0.72
DDB1-216ENST00000539739 UBE2L6O14933 153 aa10.55□□□□□ -0.72
DDB1-216ENST00000539739 WFDC10BQ8IUB3 73 aa10.55□□□□□ -0.72
DDB1-216ENST00000539739 LINC01600Q96MT4 127 aa10.55□□□□□ -0.72
DDB1-216ENST00000539739 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
DDB1-216ENST00000539739 NFE4Q86UQ8 179 aa10.55□□□□□ -0.72
DDB1-216ENST00000539739 IGLV2-18A0A075B6J9 118 aa10.54□□□□□ -0.72
DDB1-216ENST00000539739 K7EMI3 77 aa10.54□□□□□ -0.72
DDB1-216ENST00000539739 LYSTQ99698 3801 aa10.54□□□□□ -0.72
DDB1-216ENST00000539739 LCE6AA0A183 80 aa10.52□□□□□ -0.73
DDB1-216ENST00000539739 H7C423 109 aa10.52□□□□□ -0.73
DDB1-216ENST00000539739 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.73
DDB1-216ENST00000539739 ORMDL2Q53FV1 153 aa10.52□□□□□ -0.73
DDB1-216ENST00000539739 CARD19Q96LW7 228 aa10.52□□□□□ -0.73
DDB1-216ENST00000539739 CHCHD7Q9BUK0 85 aa10.52□□□□□ -0.73
DDB1-216ENST00000539739 DNAH10OSP0CZ25 163 aa10.51□□□□□ -0.73
DDB1-216ENST00000539739 NMUP48645 174 aa10.51□□□□□ -0.73
DDB1-216ENST00000539739 LAGE3Q14657 143 aa10.51□□□□□ -0.73
DDB1-216ENST00000539739 LINC01556Q5JQF7 62 aa10.51□□□□□ -0.73
DDB1-216ENST00000539739 IMUPQ9GZP8 106 aa10.51□□□□□ -0.73
DDB1-216ENST00000539739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.51□□□□□ -0.73
DDB1-216ENST00000539739 IGKV2-29A2NJV5 120 aaPredicted RBP10.51□□□□□ -0.73
DDB1-216ENST00000539739 C9JAW5 83 aa10.51□□□□□ -0.73
DDB1-216ENST00000539739 IGHV3-30P01768 117 aa10.5□□□□□ -0.73
DDB1-216ENST00000539739 IGHV3-33P01772 117 aa10.5□□□□□ -0.73
DDB1-216ENST00000539739 HBDP02042 147 aa10.5□□□□□ -0.73
DDB1-216ENST00000539739 IGHV3-30-3P0DP02 117 aa10.5□□□□□ -0.73
DDB1-216ENST00000539739 IGHV3-30-5P0DP03 117 aa10.5□□□□□ -0.73
DDB1-216ENST00000539739 SCGB1C2P0DMR2 95 aa10.49□□□□□ -0.73
DDB1-216ENST00000539739 PCP2Q8IVA1 136 aa10.49□□□□□ -0.73
DDB1-216ENST00000539739 C10orf126Q8N4M7 172 aa10.49□□□□□ -0.73
DDB1-216ENST00000539739 C20orf203Q8NBC4 194 aa10.49□□□□□ -0.73
DDB1-216ENST00000539739 ALMS1Q8TCU4 4167 aa10.49□□□□□ -0.73
DDB1-216ENST00000539739 K7ERJ3 54 aa10.48□□□□□ -0.73
DDB1-216ENST00000539739 FAM19A5Q7Z5A7 132 aaPredicted RBP10.48□□□□□ -0.73
DDB1-216ENST00000539739 IFI27L1Q96BM0 104 aa10.48□□□□□ -0.73
DDB1-216ENST00000539739 NBDYA0A0U1RRE5 68 aa10.47□□□□□ -0.73
DDB1-216ENST00000539739 A0A1B0GUV1 79 aa10.47□□□□□ -0.73
DDB1-216ENST00000539739 LINC01546A6NGU7 62 aa10.47□□□□□ -0.73
DDB1-216ENST00000539739 PMVKQ15126 192 aa10.47□□□□□ -0.73
DDB1-216ENST00000539739 TMEM101Q96IK0 257 aa10.47□□□□□ -0.73
DDB1-216ENST00000539739 UQCRQO14949 82 aa10.47□□□□□ -0.73
DDB1-216ENST00000539739 TRBV7-7A0A0K0K1E9 115 aa10.46□□□□□ -0.74
DDB1-216ENST00000539739 FAM240AA0A1B0GVK7 77 aa10.46□□□□□ -0.74
DDB1-216ENST00000539739 ATP5LO75964 103 aa10.46□□□□□ -0.74
DDB1-216ENST00000539739 ANGP03950 147 aaKnown RBP10.46□□□□□ -0.74
DDB1-216ENST00000539739 DGAT2L7PQ6IED9 249 aa10.46□□□□□ -0.74
DDB1-216ENST00000539739 Q8N3U1 123 aa10.46□□□□□ -0.74
DDB1-216ENST00000539739 VPS13DQ5THJ4 4388 aa10.46□□□□□ -0.74
DDB1-216ENST00000539739 MYMXA0A1B0GTQ4 84 aa10.45□□□□□ -0.74
DDB1-216ENST00000539739 M0R2N4 97 aa10.45□□□□□ -0.74
DDB1-216ENST00000539739 RPL39P62891 51 aaKnown RBP10.45□□□□□ -0.74
DDB1-216ENST00000539739 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
DDB1-216ENST00000539739 LINC01549A6NIU2 74 aa10.44□□□□□ -0.74
DDB1-216ENST00000539739 TIMM21Q9BVV7 248 aa10.44□□□□□ -0.74
DDB1-216ENST00000539739 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
DDB1-216ENST00000539739 IGLV4-60A0A075B6I1 120 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms