RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 TM2D2Q9BX73 214 aa9.79□□□□□ -0.84
ACTN1-205ENST00000538545 C12orf74Q32Q52 190 aa9.79□□□□□ -0.84
ACTN1-205ENST00000538545 SFTA2Q6UW10 78 aa9.79□□□□□ -0.84
ACTN1-205ENST00000538545 DAND5Q8N907 189 aa9.79□□□□□ -0.84
ACTN1-205ENST00000538545 CSDC2Q9Y534 153 aaKnown RBP9.78□□□□□ -0.84
ACTN1-205ENST00000538545 Q6ZTC4 211 aa9.78□□□□□ -0.84
ACTN1-205ENST00000538545 NDUFA12Q9UI09 145 aa9.78□□□□□ -0.84
ACTN1-205ENST00000538545 A0A0J9YWU9 116 aa9.77□□□□□ -0.85
ACTN1-205ENST00000538545 HUWE1Q7Z6Z7 4374 aaKnown RBP9.77□□□□□ -0.85
ACTN1-205ENST00000538545 A0A0J9YXY3 114 aa9.77□□□□□ -0.85
ACTN1-205ENST00000538545 APOMO95445 188 aa9.77□□□□□ -0.85
ACTN1-205ENST00000538545 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
ACTN1-205ENST00000538545 SMIM13P0DJ93 91 aa9.76□□□□□ -0.85
ACTN1-205ENST00000538545 RBX1P62877 108 aa9.76□□□□□ -0.85
ACTN1-205ENST00000538545 DEFB121Q5J5C9 76 aa9.76□□□□□ -0.85
ACTN1-205ENST00000538545 H3BRM9 83 aa9.76□□□□□ -0.85
ACTN1-205ENST00000538545 EIF4EBP3O60516 100 aaPredicted RBP9.76□□□□□ -0.85
ACTN1-205ENST00000538545 SAMD5Q5TGI4 173 aa9.76□□□□□ -0.85
ACTN1-205ENST00000538545 SMIM1B2RUZ4 78 aa9.75□□□□□ -0.85
ACTN1-205ENST00000538545 C5orf38Q86SI9 138 aa9.75□□□□□ -0.85
ACTN1-205ENST00000538545 STAB2Q8WWQ8 2551 aa9.75□□□□□ -0.85
ACTN1-205ENST00000538545 IGLV10-54A0A075B6I4 117 aa9.75□□□□□ -0.85
ACTN1-205ENST00000538545 IGHV3-30P01768 117 aa9.75□□□□□ -0.85
ACTN1-205ENST00000538545 IGHV3-30-5P0DP03 117 aa9.75□□□□□ -0.85
ACTN1-205ENST00000538545 TIRAPP58753 221 aa9.75□□□□□ -0.85
ACTN1-205ENST00000538545 NANOS2P60321 138 aaKnown RBP9.75□□□□□ -0.85
ACTN1-205ENST00000538545 HERVK_113P63121 156 aa9.75□□□□□ -0.85
ACTN1-205ENST00000538545 IGLV5-45A0A087WSX0 123 aa9.74□□□□□ -0.85
ACTN1-205ENST00000538545 C9orf118A6NHY6 69 aa9.74□□□□□ -0.85
ACTN1-205ENST00000538545 XCL1P47992 114 aa9.74□□□□□ -0.85
ACTN1-205ENST00000538545 TOMM7Q9P0U1 55 aa9.74□□□□□ -0.85
ACTN1-205ENST00000538545 PRSS2P07478 247 aa9.73□□□□□ -0.85
ACTN1-205ENST00000538545 C11orf68Q9H3H3 251 aaKnown RBP9.73□□□□□ -0.85
ACTN1-205ENST00000538545 Q9H8V8 135 aa9.73□□□□□ -0.85
ACTN1-205ENST00000538545 K7EIL1 84 aa9.73□□□□□ -0.85
ACTN1-205ENST00000538545 TAL2Q16559 108 aa9.73□□□□□ -0.85
ACTN1-205ENST00000538545 MUSTN1Q8IVN3 82 aa9.73□□□□□ -0.85
ACTN1-205ENST00000538545 LINC00269Q8N2A0 174 aa9.73□□□□□ -0.85
ACTN1-205ENST00000538545 UBE2V1Q13404 147 aa9.72□□□□□ -0.85
ACTN1-205ENST00000538545 LITAFQ99732 161 aa9.72□□□□□ -0.85
ACTN1-205ENST00000538545 LINC00959A0A1B0GUT2 108 aa9.71□□□□□ -0.85
ACTN1-205ENST00000538545 ANGP03950 147 aaKnown RBP9.71□□□□□ -0.86
ACTN1-205ENST00000538545 ZFAND6Q6FIF0 208 aa9.71□□□□□ -0.86
ACTN1-205ENST00000538545 A4D1N5 150 aa9.7□□□□□ -0.86
ACTN1-205ENST00000538545 IGLV5-39A0A0G2JS06 123 aa9.7□□□□□ -0.86
ACTN1-205ENST00000538545 IGLL5B9A064 214 aa9.7□□□□□ -0.86
ACTN1-205ENST00000538545 H7C423 109 aa9.7□□□□□ -0.86
ACTN1-205ENST00000538545 LYSTQ99698 3801 aa9.7□□□□□ -0.86
ACTN1-205ENST00000538545 CFC1BP0CG36 223 aa9.69□□□□□ -0.86
ACTN1-205ENST00000538545 CFC1P0CG37 223 aa9.69□□□□□ -0.86
ACTN1-205ENST00000538545 MRPL23Q16540 153 aaKnown RBP9.69□□□□□ -0.86
ACTN1-205ENST00000538545 IGHV3OR16-9A0A0B4J2B5 98 aa9.69□□□□□ -0.86
ACTN1-205ENST00000538545 A0A1W2PPM0 123 aa9.69□□□□□ -0.86
ACTN1-205ENST00000538545 H7C2G1 150 aa9.69□□□□□ -0.86
ACTN1-205ENST00000538545 PGPEP1Q9NXJ5 209 aa9.69□□□□□ -0.86
ACTN1-205ENST00000538545 ICOSQ9Y6W8 199 aa9.69□□□□□ -0.86
ACTN1-205ENST00000538545 KPRPQ5T749 579 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-205ENST00000538545 MTURNQ8N3F0 131 aa9.69□□□□□ -0.86
ACTN1-205ENST00000538545 SPANXB1Q9NS25 103 aaPredicted RBP9.69□□□□□ -0.86
ACTN1-205ENST00000538545 DNHD1Q96M86 4753 aa9.68□□□□□ -0.86
ACTN1-205ENST00000538545 FAM19A3Q7Z5A8 133 aa9.68□□□□□ -0.86
ACTN1-205ENST00000538545 GAGE10A6NGK3 116 aa9.68□□□□□ -0.86
ACTN1-205ENST00000538545 IGHV3-33P01772 117 aa9.68□□□□□ -0.86
ACTN1-205ENST00000538545 SMAGPQ0VAQ4 97 aa9.67□□□□□ -0.86
ACTN1-205ENST00000538545 SPCS1Q9Y6A9 102 aa9.67□□□□□ -0.86
ACTN1-205ENST00000538545 LYPD5Q6UWN5 251 aa9.66□□□□□ -0.86
ACTN1-205ENST00000538545 TMEM238C9JI98 176 aa9.66□□□□□ -0.86
ACTN1-205ENST00000538545 WFDC10BQ8IUB3 73 aa9.66□□□□□ -0.86
ACTN1-205ENST00000538545 C11orf45Q8TAV5 145 aa9.66□□□□□ -0.86
ACTN1-205ENST00000538545 KLK12Q9UKR0 248 aa9.66□□□□□ -0.86
ACTN1-205ENST00000538545 TENM2Q9NT68 2774 aa9.66□□□□□ -0.86
ACTN1-205ENST00000538545 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
ACTN1-205ENST00000538545 NDUFA1O15239 70 aa9.65□□□□□ -0.86
ACTN1-205ENST00000538545 A0A1B0GWB2 263 aa9.65□□□□□ -0.86
ACTN1-205ENST00000538545 REG3AQ06141 175 aa9.65□□□□□ -0.86
ACTN1-205ENST00000538545 TSPAN13O95857 204 aa9.64□□□□□ -0.87
ACTN1-205ENST00000538545 MEIG1Q5JSS6 88 aa9.64□□□□□ -0.87
ACTN1-205ENST00000538545 DEFB131BA0A096LNP1 70 aa9.64□□□□□ -0.87
ACTN1-205ENST00000538545 FABP2P12104 132 aa9.64□□□□□ -0.87
ACTN1-205ENST00000538545 C2orf82Q6UX34 121 aa9.64□□□□□ -0.87
ACTN1-205ENST00000538545 LINC00526Q96FQ7 95 aa9.64□□□□□ -0.87
ACTN1-205ENST00000538545 DNAH9Q9NYC9 4486 aa9.63□□□□□ -0.87
ACTN1-205ENST00000538545 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
ACTN1-205ENST00000538545 LOC107984156A0A0G2JMH3 177 aa9.63□□□□□ -0.87
ACTN1-205ENST00000538545 K7EP34 96 aa9.63□□□□□ -0.87
ACTN1-205ENST00000538545 LELP1Q5T871 98 aa9.63□□□□□ -0.87
ACTN1-205ENST00000538545 SOSTDC1Q6X4U4 206 aa9.63□□□□□ -0.87
ACTN1-205ENST00000538545 ARL17AQ8IVW1 177 aa9.63□□□□□ -0.87
ACTN1-205ENST00000538545 A0A087WZ39 114 aa9.62□□□□□ -0.87
ACTN1-205ENST00000538545 SS18Q15532 418 aa9.62□□□□□ -0.87
ACTN1-205ENST00000538545 CHCHD10Q8WYQ3 142 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-205ENST00000538545 MIAQ16674 131 aa9.62□□□□□ -0.87
ACTN1-205ENST00000538545 ESRGQ1W209 222 aa9.62□□□□□ -0.87
ACTN1-205ENST00000538545 H3BMG7 143 aa9.61□□□□□ -0.87
ACTN1-205ENST00000538545 PFN2P35080 140 aa9.61□□□□□ -0.87
ACTN1-205ENST00000538545 RPL24P83731 157 aaKnown RBP9.6□□□□□ -0.87
ACTN1-205ENST00000538545 UBE2WQ96B02 151 aa9.6□□□□□ -0.87
ACTN1-205ENST00000538545 PRO1854Q9UHT4 67 aa9.6□□□□□ -0.87
ACTN1-205ENST00000538545 TM2D3Q9BRN9 247 aa9.59□□□□□ -0.87
ACTN1-205ENST00000538545 SPANXDQ9BXN6 97 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms