RNA–Protein interactions for RNA: ENST00000538064.1

LRRK1-211, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-211ENST00000538064 OXTP01178 125 aa9.51□□□□□ -0.89
LRRK1-211ENST00000538064 MRPS36P82909 103 aaKnown RBP9.51□□□□□ -0.89
LRRK1-211ENST00000538064 FOXI1Q12951 378 aa9.51□□□□□ -0.89
LRRK1-211ENST00000538064 Q6ZUT4 128 aa9.51□□□□□ -0.89
LRRK1-211ENST00000538064 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
LRRK1-211ENST00000538064 YPEL4Q96NS1 127 aa9.51□□□□□ -0.89
LRRK1-211ENST00000538064 PYGO1Q9Y3Y4 419 aa9.51□□□□□ -0.89
LRRK1-211ENST00000538064 XCL1P47992 114 aa9.5□□□□□ -0.89
LRRK1-211ENST00000538064 HIGD2BQ4VC39 106 aa9.5□□□□□ -0.89
LRRK1-211ENST00000538064 C2orf66Q6UXQ4 117 aa9.5□□□□□ -0.89
LRRK1-211ENST00000538064 CBLN2Q8IUK8 224 aa9.5□□□□□ -0.89
LRRK1-211ENST00000538064 TRAV13-1A0A0B4J241 112 aa9.49□□□□□ -0.89
LRRK1-211ENST00000538064 CHTF8P0CG12 524 aa9.49□□□□□ -0.89
LRRK1-211ENST00000538064 RNASE13Q5GAN3 156 aaKnown RBP9.49□□□□□ -0.89
LRRK1-211ENST00000538064 CD164L2Q6UWJ8 174 aa9.49□□□□□ -0.89
LRRK1-211ENST00000538064 FA2HQ7L5A8 372 aa9.49□□□□□ -0.89
LRRK1-211ENST00000538064 HNRNPA3P51991 378 aaKnown RBP9.48□□□□□ -0.89
LRRK1-211ENST00000538064 Q6ZN92 141 aa9.48□□□□□ -0.89
LRRK1-211ENST00000538064 HMCN2Q8NDA2 5059 aa9.47□□□□□ -0.89
LRRK1-211ENST00000538064 A0A087WYN8 130 aa9.47□□□□□ -0.89
LRRK1-211ENST00000538064 LINC01549A6NIU2 74 aa9.47□□□□□ -0.89
LRRK1-211ENST00000538064 NPSP0C0P6 89 aa9.47□□□□□ -0.89
LRRK1-211ENST00000538064 TMEM141Q96I45 108 aa9.47□□□□□ -0.89
LRRK1-211ENST00000538064 IGLV4-3A0A075B6K6 122 aa9.46□□□□□ -0.9
LRRK1-211ENST00000538064 IFITM10A6NMD0 228 aa9.46□□□□□ -0.9
LRRK1-211ENST00000538064 PAPPA-AS1Q5QFB9 102 aa9.46□□□□□ -0.9
LRRK1-211ENST00000538064 TEX43Q6ZNM6 134 aa9.46□□□□□ -0.9
LRRK1-211ENST00000538064 OPRPNQ99935 248 aaPredicted RBP9.46□□□□□ -0.9
LRRK1-211ENST00000538064 C2orf88Q9BSF0 95 aa9.46□□□□□ -0.9
LRRK1-211ENST00000538064 PLAC8Q9NZF1 115 aa9.46□□□□□ -0.9
LRRK1-211ENST00000538064 IGHV1-58A0A0C4DH39 117 aa9.45□□□□□ -0.9
LRRK1-211ENST00000538064 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
LRRK1-211ENST00000538064 RAB5BP61020 215 aa9.45□□□□□ -0.9
LRRK1-211ENST00000538064 COX6A2Q02221 97 aa9.45□□□□□ -0.9
LRRK1-211ENST00000538064 C18orf32Q8TCD1 76 aa9.45□□□□□ -0.9
LRRK1-211ENST00000538064 TOMM6Q96B49 74 aa9.45□□□□□ -0.9
LRRK1-211ENST00000538064 VCX2Q9H322 139 aa9.45□□□□□ -0.9
LRRK1-211ENST00000538064 IGIPA6NJ69 53 aa9.44□□□□□ -0.9
LRRK1-211ENST00000538064 COX7A2LO14548 114 aa9.44□□□□□ -0.9
LRRK1-211ENST00000538064 LINC00614P0C842 121 aa9.44□□□□□ -0.9
LRRK1-211ENST00000538064 MALP21145 153 aa9.44□□□□□ -0.9
LRRK1-211ENST00000538064 FAM104AQ969W3 186 aa9.44□□□□□ -0.9
LRRK1-211ENST00000538064 TIMM17AQ99595 171 aa9.44□□□□□ -0.9
LRRK1-211ENST00000538064 PKIGQ9Y2B9 76 aa9.44□□□□□ -0.9
LRRK1-211ENST00000538064 ERASQ7Z444 233 aa9.43□□□□□ -0.9
LRRK1-211ENST00000538064 DPH3Q96FX2 82 aa9.43□□□□□ -0.9
LRRK1-211ENST00000538064 SCGB3A1Q96QR1 104 aa9.43□□□□□ -0.9
LRRK1-211ENST00000538064 IGKV2-24A0A0C4DH68 120 aa9.42□□□□□ -0.9
LRRK1-211ENST00000538064 APOMO95445 188 aa9.42□□□□□ -0.9
LRRK1-211ENST00000538064 A0A096LNI7 61 aa9.41□□□□□ -0.9
LRRK1-211ENST00000538064 MAJINQ3KP22 176 aa9.41□□□□□ -0.9
LRRK1-211ENST00000538064 C7orf33Q8WU49 177 aa9.41□□□□□ -0.9
LRRK1-211ENST00000538064 CARD19Q96LW7 228 aa9.41□□□□□ -0.9
LRRK1-211ENST00000538064 AMELXQ99217 191 aa9.41□□□□□ -0.9
LRRK1-211ENST00000538064 ZNF561-AS1K7EIQ3 104 aa9.4□□□□□ -0.9
LRRK1-211ENST00000538064 SERTAD4-AS1Q5TG53 156 aa9.4□□□□□ -0.9
LRRK1-211ENST00000538064 Q6ZRU5 148 aa9.4□□□□□ -0.9
LRRK1-211ENST00000538064 C5orf38Q86SI9 138 aa9.4□□□□□ -0.9
LRRK1-211ENST00000538064 COLCA2A8K830 154 aa9.39□□□□□ -0.91
LRRK1-211ENST00000538064 TRGC2P03986 189 aa9.39□□□□□ -0.91
LRRK1-211ENST00000538064 UBE2D1P51668 147 aa9.39□□□□□ -0.91
LRRK1-211ENST00000538064 SEC11AP67812 179 aa9.39□□□□□ -0.91
LRRK1-211ENST00000538064 LINC00526Q96FQ7 95 aa9.39□□□□□ -0.91
LRRK1-211ENST00000538064 LINC00474Q9P2X8 69 aa9.39□□□□□ -0.91
LRRK1-211ENST00000538064 IGHV3OR16-9A0A0B4J2B5 98 aa9.38□□□□□ -0.91
LRRK1-211ENST00000538064 HBDP02042 147 aa9.38□□□□□ -0.91
LRRK1-211ENST00000538064 LINC00242Q5T6M2 205 aa9.38□□□□□ -0.91
LRRK1-211ENST00000538064 STPG4Q8N801 248 aa9.38□□□□□ -0.91
LRRK1-211ENST00000538064 CHCHD1Q96BP2 118 aaKnown RBP9.38□□□□□ -0.91
LRRK1-211ENST00000538064 URB1-AS1Q96HZ7 61 aa9.38□□□□□ -0.91
LRRK1-211ENST00000538064 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.37□□□□□ -0.91
LRRK1-211ENST00000538064 SYCNQ0VAF6 134 aa9.37□□□□□ -0.91
LRRK1-211ENST00000538064 ZC2HC1BQ5TFG8 222 aa9.37□□□□□ -0.91
LRRK1-211ENST00000538064 LINC00173Q6ZV60 143 aa9.37□□□□□ -0.91
LRRK1-211ENST00000538064 BAGE3Q86Y29 109 aa9.37□□□□□ -0.91
LRRK1-211ENST00000538064 TNXBP22105 4242 aa9.37□□□□□ -0.91
LRRK1-211ENST00000538064 PRR3P79522 188 aaKnown RBP9.36□□□□□ -0.91
LRRK1-211ENST00000538064 IGLV4-69A0A075B6H9 119 aa9.35□□□□□ -0.91
LRRK1-211ENST00000538064 A0A087WZ39 114 aa9.35□□□□□ -0.91
LRRK1-211ENST00000538064 SCO1O75880 301 aa9.35□□□□□ -0.91
LRRK1-211ENST00000538064 ATP5LO75964 103 aa9.35□□□□□ -0.91
LRRK1-211ENST00000538064 HERVK_113P63121 156 aa9.35□□□□□ -0.91
LRRK1-211ENST00000538064 PMVKQ15126 192 aa9.35□□□□□ -0.91
LRRK1-211ENST00000538064 FAM19A3Q7Z5A8 133 aa9.35□□□□□ -0.91
LRRK1-211ENST00000538064 OR10D4PQ8NGN7 298 aa9.35□□□□□ -0.91
LRRK1-211ENST00000538064 GEMIN7Q9H840 131 aaKnown RBP9.35□□□□□ -0.91
LRRK1-211ENST00000538064 HSBP1O75506 76 aa9.34□□□□□ -0.91
LRRK1-211ENST00000538064 MT1HL1P0DM35 61 aa9.34□□□□□ -0.91
LRRK1-211ENST00000538064 SPAG11BQ08648 103 aa9.34□□□□□ -0.91
LRRK1-211ENST00000538064 PMCHL1Q16048 86 aa9.34□□□□□ -0.91
LRRK1-211ENST00000538064 LINC01561Q8N1V8 128 aa9.34□□□□□ -0.91
LRRK1-211ENST00000538064 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
LRRK1-211ENST00000538064 CST9LQ9H4G1 147 aa9.34□□□□□ -0.91
LRRK1-211ENST00000538064 A0A096LNJ9 63 aa9.33□□□□□ -0.92
LRRK1-211ENST00000538064 F8WDY8 70 aa9.33□□□□□ -0.92
LRRK1-211ENST00000538064 S100A1P23297 94 aa9.33□□□□□ -0.92
LRRK1-211ENST00000538064 PTTG1IPP53801 180 aa9.33□□□□□ -0.92
LRRK1-211ENST00000538064 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
LRRK1-211ENST00000538064 CAMK2N2Q96S95 79 aa9.33□□□□□ -0.92
LRRK1-211ENST00000538064 LOC107984640A0A0U1RRK4 108 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms