RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 FASNP49327 2511 aaKnown RBP7.7□□□□□ -1.18
RTN3-208ENST00000537981 BPESC1Q9GZL8 116 aa7.69□□□□□ -1.18
RTN3-208ENST00000537981 LENEPQ9Y5L5 61 aa7.69□□□□□ -1.18
RTN3-208ENST00000537981 IGHV3-38A0A0C4DH36 116 aa7.69□□□□□ -1.18
RTN3-208ENST00000537981 CCL21O00585 134 aa7.69□□□□□ -1.18
RTN3-208ENST00000537981 NDUFA1O15239 70 aa7.69□□□□□ -1.18
RTN3-208ENST00000537981 LINC00337Q8N6G1 96 aa7.69□□□□□ -1.18
RTN3-208ENST00000537981 RMI2Q96E14 147 aa7.69□□□□□ -1.18
RTN3-208ENST00000537981 RBMY1BA6NDE4 496 aaKnown RBP7.68□□□□□ -1.18
RTN3-208ENST00000537981 RBMY1EA6NEQ0 496 aaKnown RBP7.68□□□□□ -1.18
RTN3-208ENST00000537981 RBMY1DP0C7P1 496 aaKnown RBP7.68□□□□□ -1.18
RTN3-208ENST00000537981 RBMY1A1P0DJD3 496 aaKnown RBP7.68□□□□□ -1.18
RTN3-208ENST00000537981 RBMY1CP0DJD4 496 aa7.68□□□□□ -1.18
RTN3-208ENST00000537981 RBMY1FQ15415 496 aaKnown RBP7.68□□□□□ -1.18
RTN3-208ENST00000537981 NBPF19A0A087WUL8 3843 aa7.68□□□□□ -1.18
RTN3-208ENST00000537981 NDUFC2O95298 119 aa7.68□□□□□ -1.18
RTN3-208ENST00000537981 Q8N9W7 124 aa7.68□□□□□ -1.18
RTN3-208ENST00000537981 SERP1Q9Y6X1 66 aa7.68□□□□□ -1.18
RTN3-208ENST00000537981 KNCNA6PVL3 124 aa7.67□□□□□ -1.18
RTN3-208ENST00000537981 FAM229BQ4G0N7 80 aa7.67□□□□□ -1.18
RTN3-208ENST00000537981 C11orf45Q8TAV5 145 aa7.67□□□□□ -1.18
RTN3-208ENST00000537981 IGHV3-16A0A0C4DH30 117 aa7.67□□□□□ -1.18
RTN3-208ENST00000537981 PSMB8P28062 276 aa7.67□□□□□ -1.18
RTN3-208ENST00000537981 Q8N6K4 173 aa7.67□□□□□ -1.18
RTN3-208ENST00000537981 TIMM17BO60830 172 aa7.66□□□□□ -1.18
RTN3-208ENST00000537981 LINC00467Q9BRT7 94 aa7.66□□□□□ -1.18
RTN3-208ENST00000537981 IGKV2-28A0A075B6P5 120 aa7.66□□□□□ -1.18
RTN3-208ENST00000537981 KLLNB2CW77 178 aa7.66□□□□□ -1.18
RTN3-208ENST00000537981 E7EQL1 145 aa7.66□□□□□ -1.18
RTN3-208ENST00000537981 IGKV2D-28P01615 120 aa7.66□□□□□ -1.18
RTN3-208ENST00000537981 Q6ZSN1 163 aa7.66□□□□□ -1.18
RTN3-208ENST00000537981 ANKHD1Q8IWZ3 2542 aaKnown RBP7.65□□□□□ -1.18
RTN3-208ENST00000537981 CREBBPQ92793 2442 aa7.65□□□□□ -1.18
RTN3-208ENST00000537981 C11orf72Q8NBR9 251 aa7.65□□□□□ -1.18
RTN3-208ENST00000537981 CHCHD7Q9BUK0 85 aa7.65□□□□□ -1.18
RTN3-208ENST00000537981 MYO18BQ8IUG5 2567 aa7.65□□□□□ -1.19
RTN3-208ENST00000537981 LECT2O14960 151 aa7.64□□□□□ -1.19
RTN3-208ENST00000537981 MIR7-3HGQ8N6C7 128 aa7.64□□□□□ -1.19
RTN3-208ENST00000537981 OBSCN-AS1Q96MR7 158 aa7.64□□□□□ -1.19
RTN3-208ENST00000537981 ODF3BA8MYP8 253 aa7.64□□□□□ -1.19
RTN3-208ENST00000537981 HTN1P15515 57 aa7.64□□□□□ -1.19
RTN3-208ENST00000537981 SMIM11BQ8TCY0 68 aa7.64□□□□□ -1.19
RTN3-208ENST00000537981 NDUFC2-KCTD14E9PQ53 114 aa7.63□□□□□ -1.19
RTN3-208ENST00000537981 F8WEM9 126 aa7.63□□□□□ -1.19
RTN3-208ENST00000537981 CELSR2Q9HCU4 2923 aa7.63□□□□□ -1.19
RTN3-208ENST00000537981 HELZ2Q9BYK8 2649 aaKnown RBP7.63□□□□□ -1.19
RTN3-208ENST00000537981 IGHV3-11P01762 117 aa7.63□□□□□ -1.19
RTN3-208ENST00000537981 MPLKIPQ8TAP9 179 aa7.63□□□□□ -1.19
RTN3-208ENST00000537981 TRAV10A0A0B4J240 114 aa7.62□□□□□ -1.19
RTN3-208ENST00000537981 PLA2G1BP04054 148 aaKnown RBP7.62□□□□□ -1.19
RTN3-208ENST00000537981 Q6ZTI0 123 aa7.62□□□□□ -1.19
RTN3-208ENST00000537981 FLNCQ14315 2725 aa7.62□□□□□ -1.19
RTN3-208ENST00000537981 NOTCH3Q9UM47 2321 aa7.62□□□□□ -1.19
RTN3-208ENST00000537981 IGHV3OR16-12A0A075B7B8 117 aa7.61□□□□□ -1.19
RTN3-208ENST00000537981 TRBV7-6A0A0J9YX20 115 aa7.61□□□□□ -1.19
RTN3-208ENST00000537981 GCN1Q92616 2671 aaKnown RBP7.61□□□□□ -1.19
RTN3-208ENST00000537981 SMIM26A0A096LP01 95 aa7.6□□□□□ -1.19
RTN3-208ENST00000537981 SMIM1B2RUZ4 78 aa7.6□□□□□ -1.19
RTN3-208ENST00000537981 CCKP06307 115 aa7.6□□□□□ -1.19
RTN3-208ENST00000537981 SPINK13Q1W4C9 94 aa7.6□□□□□ -1.19
RTN3-208ENST00000537981 IGLV5-39A0A0G2JS06 123 aa7.6□□□□□ -1.19
RTN3-208ENST00000537981 LINC00242Q5T6M2 205 aa7.6□□□□□ -1.19
RTN3-208ENST00000537981 C1orf158Q8N1D5 194 aa7.6□□□□□ -1.19
RTN3-208ENST00000537981 M0R2N4 97 aa7.59□□□□□ -1.19
RTN3-208ENST00000537981 RBM3P98179 157 aaKnown RBP7.59□□□□□ -1.19
RTN3-208ENST00000537981 ZNF843Q8N446 348 aa7.59□□□□□ -1.19
RTN3-208ENST00000537981 RPL36AP83881 106 aaKnown RBP7.59□□□□□ -1.19
RTN3-208ENST00000537981 PMAIP1Q13794 54 aa7.59□□□□□ -1.19
RTN3-208ENST00000537981 MINOS1Q5TGZ0 78 aa7.59□□□□□ -1.19
RTN3-208ENST00000537981 RPL36ALQ969Q0 106 aaKnown RBP7.59□□□□□ -1.19
RTN3-208ENST00000537981 CRPP02741 224 aa7.58□□□□□ -1.2
RTN3-208ENST00000537981 TENM4Q6N022 2769 aa7.58□□□□□ -1.2
RTN3-208ENST00000537981 IGLV5-45A0A087WSX0 123 aa7.58□□□□□ -1.2
RTN3-208ENST00000537981 RHPN1-AS1Q9BWJ2 59 aa7.58□□□□□ -1.2
RTN3-208ENST00000537981 NIPBLQ6KC79 2804 aaeCLIP7.58□□□□□ -1.2
RTN3-208ENST00000537981 UTP20O75691 2785 aaKnown RBP7.57□□□□□ -1.2
RTN3-208ENST00000537981 LRRK2Q5S007 2527 aa7.57□□□□□ -1.2
RTN3-208ENST00000537981 SND1-IT1Q9HBX3 110 aa7.56□□□□□ -1.2
RTN3-208ENST00000537981 IGFL2Q6UWQ7 119 aa7.56□□□□□ -1.2
RTN3-208ENST00000537981 RNASE1P07998 156 aaKnown RBP7.55□□□□□ -1.2
RTN3-208ENST00000537981 ZFP36P26651 326 aaKnown RBP7.55□□□□□ -1.2
RTN3-208ENST00000537981 KLKP1Q107X0 134 aa7.55□□□□□ -1.2
RTN3-208ENST00000537981 IGHV1OR15-1A0A075B7D0 117 aa7.55□□□□□ -1.2
RTN3-208ENST00000537981 C19orf84I3L1E1 186 aa7.55□□□□□ -1.2
RTN3-208ENST00000537981 USP9XQ93008 2570 aaPredicted RBP7.55□□□□□ -1.2
RTN3-208ENST00000537981 IGFL3Q6UXB1 125 aa7.54□□□□□ -1.2
RTN3-208ENST00000537981 TM2D3Q9BRN9 247 aa7.54□□□□□ -1.2
RTN3-208ENST00000537981 S100A7L2Q5SY68 101 aa7.54□□□□□ -1.2
RTN3-208ENST00000537981 HIVEP3Q5T1R4 2406 aa7.54□□□□□ -1.2
RTN3-208ENST00000537981 A0A087WZ39 114 aa7.53□□□□□ -1.2
RTN3-208ENST00000537981 TRAV13-2A0A0B4J235 113 aa7.53□□□□□ -1.2
RTN3-208ENST00000537981 TRAV7A0A075B6U4 112 aa7.53□□□□□ -1.2
RTN3-208ENST00000537981 K7EMT4 169 aa7.53□□□□□ -1.2
RTN3-208ENST00000537981 SPATA3Q8NHX4 192 aa7.53□□□□□ -1.2
RTN3-208ENST00000537981 ORMDL1Q9P0S3 153 aa7.53□□□□□ -1.2
RTN3-208ENST00000537981 FLNBO75369 2602 aaKnown RBP7.52□□□□□ -1.2
RTN3-208ENST00000537981 CCL18P55774 89 aa7.52□□□□□ -1.21
RTN3-208ENST00000537981 UBE2E2Q96LR5 201 aa7.52□□□□□ -1.21
RTN3-208ENST00000537981 ABCA2Q9BZC7 2435 aa7.52□□□□□ -1.21
RTN3-208ENST00000537981 SNRPD3P62318 126 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms