RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 HHLA3Q9XRX5 114 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 A0A087WZ39 114 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 ZFAND2AQ8N6M9 145 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 ESM1Q9NQ30 184 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 KAAG1Q9UBP8 84 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 BEAN1Q3B7T3 259 aa4.24□□□□□ -1.73
CSMD1-215ENST00000537824 RNF223E7ERA6 249 aa4.23□□□□□ -1.73
CSMD1-215ENST00000537824 M0QY20 66 aa4.23□□□□□ -1.73
CSMD1-215ENST00000537824 CCL24O00175 119 aa4.23□□□□□ -1.73
CSMD1-215ENST00000537824 RPS28P62857 69 aaKnown RBP4.23□□□□□ -1.73
CSMD1-215ENST00000537824 KIR2DL5BQ8NHK3 375 aa4.23□□□□□ -1.73
CSMD1-215ENST00000537824 HILS1P60008 231 aa4.23□□□□□ -1.73
CSMD1-215ENST00000537824 LY6DQ14210 128 aa4.23□□□□□ -1.73
CSMD1-215ENST00000537824 IGHV4-38-2P0DP08 117 aa4.23□□□□□ -1.73
CSMD1-215ENST00000537824 BRWD1-AS2P59051 145 aa4.23□□□□□ -1.73
CSMD1-215ENST00000537824 Q6ZPA2 131 aa4.23□□□□□ -1.73
CSMD1-215ENST00000537824 ODF3Q96PU9 254 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 Q6ZQY7 126 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 C9orf85Q96MD7 179 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 A0A0J9YX75 114 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 B9D2Q9BPU9 175 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 Q6ZSR3 168 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 ZMAT4Q9H898 229 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 C6orf99Q4VX62 202 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 ZNF843Q8N446 348 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 DEFB4AO15263 64 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 ESRGQ1W209 222 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 UNQ9165/PRO28630Q6UXU0 137 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 C5orf56Q8N8D9 126 aa4.22□□□□□ -1.73
CSMD1-215ENST00000537824 TSPEAR-AS2P59090 65 aa4.21□□□□□ -1.73
CSMD1-215ENST00000537824 Q8N9L7 120 aa4.21□□□□□ -1.73
CSMD1-215ENST00000537824 EIF4EBP1Q13541 118 aaPredicted RBP4.21□□□□□ -1.73
CSMD1-215ENST00000537824 Q8N9W7 124 aa4.21□□□□□ -1.74
CSMD1-215ENST00000537824 CHCHD10Q8WYQ3 142 aaPredicted RBP4.21□□□□□ -1.74
CSMD1-215ENST00000537824 XAGE1AQ9HD64 81 aa4.21□□□□□ -1.74
CSMD1-215ENST00000537824 SPART-AS1P0CW21 52 aa4.21□□□□□ -1.74
CSMD1-215ENST00000537824 IGHV4-61A0A0C4DH41 118 aa4.21□□□□□ -1.74
CSMD1-215ENST00000537824 Q6ZSV7 163 aa4.21□□□□□ -1.74
CSMD1-215ENST00000537824 TMEM254Q8TBM7 123 aa4.21□□□□□ -1.74
CSMD1-215ENST00000537824 DNAJC9-AS1A6NH13 148 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 NTM-AS1Q6ZSK4 140 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 MUC22E2RYF6 1773 aaPredicted RBP4.2□□□□□ -1.74
CSMD1-215ENST00000537824 GPHB5Q86YW7 130 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 Q8N6K4 173 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 A0A096LNI7 61 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 LINC00269Q8N2A0 174 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 HIGD2AQ9BW72 106 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 URB1-AS1Q96HZ7 61 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 K7EMT4 169 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 PRR9Q5T870 116 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 A0A087WYN8 130 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 LINC00208Q96KT6 92 aa4.2□□□□□ -1.74
CSMD1-215ENST00000537824 LY6G6EA0A0G2JKS1 128 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 C4orf48Q5BLP8 95 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 U3KQA8 63 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 K7ENP7 123 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 CCL18P55774 89 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 FAM215AQ9Y5M1 114 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 ADAMTSL4-AS1Q5T5F5 129 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 CRIP3Q6Q6R5 217 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 Q6ZTI0 123 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 CCDC140Q96MF4 163 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 PROK1P58294 105 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 Q8N3U1 123 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 Q8N814 137 aa4.19□□□□□ -1.74
CSMD1-215ENST00000537824 REG3AQ06141 175 aa4.18□□□□□ -1.74
CSMD1-215ENST00000537824 CRYGDP07320 174 aa4.18□□□□□ -1.74
CSMD1-215ENST00000537824 IGKV2-24A0A0C4DH68 120 aa4.18□□□□□ -1.74
CSMD1-215ENST00000537824 LIMD2Q9BT23 127 aa4.18□□□□□ -1.74
CSMD1-215ENST00000537824 DEFB135Q30KP9 77 aa4.18□□□□□ -1.74
CSMD1-215ENST00000537824 DHRS4-AS1Q9P1J3 65 aa4.18□□□□□ -1.74
CSMD1-215ENST00000537824 SMAD5-AS1Q9Y6J3 95 aa4.18□□□□□ -1.74
CSMD1-215ENST00000537824 ZNF73O43830 326 aaPredicted RBP4.18□□□□□ -1.74
CSMD1-215ENST00000537824 LINC00846Q9NV44 126 aa4.18□□□□□ -1.74
CSMD1-215ENST00000537824 PRO0461Q9UI25 63 aa4.18□□□□□ -1.74
CSMD1-215ENST00000537824 F8W735 103 aaPredicted RBP4.17□□□□□ -1.74
CSMD1-215ENST00000537824 PRR3P79522 188 aaKnown RBP4.17□□□□□ -1.74
CSMD1-215ENST00000537824 RNF138Q8WVD3 245 aa4.17□□□□□ -1.74
CSMD1-215ENST00000537824 APCP25054 2843 aa4.17□□□□□ -1.74
CSMD1-215ENST00000537824 IGIPA6NJ69 53 aa4.17□□□□□ -1.74
CSMD1-215ENST00000537824 RPL28P46779 137 aaKnown RBP4.17□□□□□ -1.74
CSMD1-215ENST00000537824 C11orf21Q9P2W6 132 aa4.17□□□□□ -1.74
CSMD1-215ENST00000537824 COL4A4P53420 1690 aaPredicted RBP4.17□□□□□ -1.74
CSMD1-215ENST00000537824 IGLV4-69A0A075B6H9 119 aa4.17□□□□□ -1.74
CSMD1-215ENST00000537824 LINC01548A6NM66 108 aa4.17□□□□□ -1.74
CSMD1-215ENST00000537824 C1orf229Q6ZS94 237 aaPredicted RBP4.17□□□□□ -1.74
CSMD1-215ENST00000537824 SPINK6Q6UWN8 80 aa4.16□□□□□ -1.74
CSMD1-215ENST00000537824 Q9UF83 564 aa4.16□□□□□ -1.74
CSMD1-215ENST00000537824 Q8N7P7 452 aa4.16□□□□□ -1.74
CSMD1-215ENST00000537824 SPAG11AQ6PDA7 123 aa4.16□□□□□ -1.74
CSMD1-215ENST00000537824 SETXQ7Z333 2677 aaKnown RBP4.16□□□□□ -1.74
CSMD1-215ENST00000537824 POLR2KP53803 58 aaKnown RBP4.16□□□□□ -1.74
CSMD1-215ENST00000537824 LINC01547P58512 204 aaPredicted RBP4.16□□□□□ -1.74
CSMD1-215ENST00000537824 ZFP36P26651 326 aaKnown RBP4.16□□□□□ -1.74
CSMD1-215ENST00000537824 PLAC8L1A1L4L8 177 aa4.16□□□□□ -1.74
CSMD1-215ENST00000537824 GRNP28799 593 aaKnown RBP4.16□□□□□ -1.74
CSMD1-215ENST00000537824 TRBV6-4A0A1B0GX49 114 aa4.16□□□□□ -1.74
CSMD1-215ENST00000537824 IGKV2-28A0A075B6P5 120 aa4.15□□□□□ -1.74
CSMD1-215ENST00000537824 H0Y9P7 68 aa4.15□□□□□ -1.74
CSMD1-215ENST00000537824 IGKV2D-28P01615 120 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms