RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.5□□□□□ -1.69
YBX3-206ENST00000536823 A0A1B0GXF2 115 aa4.5□□□□□ -1.69
YBX3-206ENST00000536823 S100A8P05109 93 aa4.5□□□□□ -1.69
YBX3-206ENST00000536823 KRTAP10-4P60372 401 aaPredicted RBP4.5□□□□□ -1.69
YBX3-206ENST00000536823 SEC61BP60468 96 aaKnown RBP4.5□□□□□ -1.69
YBX3-206ENST00000536823 RPL32P62910 135 aaKnown RBP4.5□□□□□ -1.69
YBX3-206ENST00000536823 HBBP68871 147 aa4.5□□□□□ -1.69
YBX3-206ENST00000536823 CIRBPQ14011 172 aaKnown RBP4.5□□□□□ -1.69
YBX3-206ENST00000536823 MRPL54Q6P161 138 aaKnown RBP4.5□□□□□ -1.69
YBX3-206ENST00000536823 SDIM1Q6ZPB5 146 aa4.5□□□□□ -1.69
YBX3-206ENST00000536823 GVQW2A0A096LPI5 108 aaPredicted RBP4.49□□□□□ -1.69
YBX3-206ENST00000536823 LINC00959A0A1B0GUT2 108 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 LINC00862A6NCI5 91 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 F8W036 122 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 PANO1I0J062 215 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 CCL25O15444 150 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 FCER1GP30273 86 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 KRTAP10-5P60370 271 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 SMAGPQ0VAQ4 97 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 HIGD2BQ4VC39 106 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 KIR2DL4Q99706 377 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 C20orf78Q9BR46 151 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 CDC42SE2Q9NRR3 84 aa4.49□□□□□ -1.69
YBX3-206ENST00000536823 TRBV24-1A0A075B6N3 115 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 D6R8Y8 96 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 PHOX2AO14813 284 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 TCAPO15273 167 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 CKS2P33552 79 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 XCL1P47992 114 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 RAB14P61106 215 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 PNRC1Q12796 327 aaPredicted RBP4.48□□□□□ -1.69
YBX3-206ENST00000536823 ATP5L2Q7Z4Y8 100 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 ZNF664Q8N3J9 261 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 TIMM21Q9BVV7 248 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 SMIM2Q9BVW6 85 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 CSDC2Q9Y534 153 aaKnown RBP4.48□□□□□ -1.69
YBX3-206ENST00000536823 FAT3Q8TDW7 4589 aa4.48□□□□□ -1.69
YBX3-206ENST00000536823 LRP1Q07954 4544 aaKnown RBP4.48□□□□□ -1.69
YBX3-206ENST00000536823 IGHV1-58A0A0C4DH39 117 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 NPYP01303 97 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 PPBPP02775 128 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 CHTF8P0CG12 524 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 RPL37AP61513 92 aaKnown RBP4.47□□□□□ -1.69
YBX3-206ENST00000536823 SS18Q15532 418 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 PAPPA-AS1Q5QFB9 102 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 CD164L2Q6UWJ8 174 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 Q6ZUT4 128 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 SPACA4Q8TDM5 124 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 UBE2D4Q9Y2X8 147 aa4.47□□□□□ -1.69
YBX3-206ENST00000536823 C1orf196B1AJZ1 125 aa4.46□□□□□ -1.7
YBX3-206ENST00000536823 MT-ND4LP03901 98 aa4.46□□□□□ -1.7
YBX3-206ENST00000536823 RPL39P62891 51 aaKnown RBP4.46□□□□□ -1.7
YBX3-206ENST00000536823 RNASE13Q5GAN3 156 aaKnown RBP4.46□□□□□ -1.7
YBX3-206ENST00000536823 CLLU1Q5K131 121 aa4.46□□□□□ -1.7
YBX3-206ENST00000536823 ORMDL3Q8N138 153 aa4.46□□□□□ -1.7
YBX3-206ENST00000536823 A0A087WYN8 130 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 TRAV13-1A0A0B4J241 112 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 COX7A2LO14548 114 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 PRSS2P07478 247 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 COX6A2Q02221 97 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 CARD19Q96LW7 228 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 PRELID3AQ96N28 172 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 SPANXA1Q9NS26 97 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 PLAC8Q9NZF1 115 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 PKIGQ9Y2B9 76 aa4.45□□□□□ -1.7
YBX3-206ENST00000536823 IGLV5-37A0A075B6J1 123 aa4.44□□□□□ -1.7
YBX3-206ENST00000536823 MRPS36P82909 103 aaKnown RBP4.44□□□□□ -1.7
YBX3-206ENST00000536823 TMEM136Q6ZRR5 245 aa4.44□□□□□ -1.7
YBX3-206ENST00000536823 LINC00526Q96FQ7 95 aa4.44□□□□□ -1.7
YBX3-206ENST00000536823 LAMTOR2Q9Y2Q5 125 aa4.44□□□□□ -1.7
YBX3-206ENST00000536823 A0A096LNI7 61 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 IGKV2-24A0A0C4DH68 120 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 ADCYAP1P18509 176 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 RAB5AP20339 215 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 HNRNPA3P51991 378 aaKnown RBP4.43□□□□□ -1.7
YBX3-206ENST00000536823 IFITM2Q01629 132 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 SYCNQ0VAF6 134 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 MAJINQ3KP22 176 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 UQCC3Q6UW78 93 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 FAM104AQ969W3 186 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 DPH3Q96FX2 82 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 MAP1LC3AQ9H492 121 aa4.43□□□□□ -1.7
YBX3-206ENST00000536823 IGLV4-69A0A075B6H9 119 aa4.42□□□□□ -1.7
YBX3-206ENST00000536823 IFITM10A6NMD0 228 aa4.42□□□□□ -1.7
YBX3-206ENST00000536823 OXTP01178 125 aa4.42□□□□□ -1.7
YBX3-206ENST00000536823 PET117Q6UWS5 81 aa4.42□□□□□ -1.7
YBX3-206ENST00000536823 Q6ZRU5 148 aa4.42□□□□□ -1.7
YBX3-206ENST00000536823 C5orf38Q86SI9 138 aa4.42□□□□□ -1.7
YBX3-206ENST00000536823 STPG4Q8N801 248 aa4.42□□□□□ -1.7
YBX3-206ENST00000536823 C7orf33Q8WU49 177 aa4.42□□□□□ -1.7
YBX3-206ENST00000536823 LINC00474Q9P2X8 69 aa4.42□□□□□ -1.7
YBX3-206ENST00000536823 IGLV4-3A0A075B6K6 122 aa4.41□□□□□ -1.7
YBX3-206ENST00000536823 IGHV3OR16-9A0A0B4J2B5 98 aa4.41□□□□□ -1.7
YBX3-206ENST00000536823 TMEM218A2RU14 115 aa4.41□□□□□ -1.7
YBX3-206ENST00000536823 APOMO95445 188 aa4.41□□□□□ -1.7
YBX3-206ENST00000536823 MT3P25713 68 aa4.41□□□□□ -1.7
YBX3-206ENST00000536823 IFI27P40305 119 aaPredicted RBP4.41□□□□□ -1.7
YBX3-206ENST00000536823 SPAG11BQ08648 103 aa4.41□□□□□ -1.7
YBX3-206ENST00000536823 GAGE2BQ13066 116 aa4.41□□□□□ -1.7
YBX3-206ENST00000536823 GAGE2EQ4V326 116 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms