RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 HBDP02042 147 aa8.85□□□□□ -0.99
RPAIN-205ENST00000536255 PRSS1P07477 247 aa8.85□□□□□ -0.99
RPAIN-205ENST00000536255 MALP21145 153 aa8.85□□□□□ -0.99
RPAIN-205ENST00000536255 BAGE3Q86Y29 109 aa8.85□□□□□ -0.99
RPAIN-205ENST00000536255 AMELXQ99217 191 aa8.85□□□□□ -0.99
RPAIN-205ENST00000536255 IGHV1-58A0A0C4DH39 117 aa8.84□□□□□ -0.99
RPAIN-205ENST00000536255 ATP6V1G1O75348 118 aa8.84□□□□□ -0.99
RPAIN-205ENST00000536255 URB1-AS1Q96HZ7 61 aa8.84□□□□□ -0.99
RPAIN-205ENST00000536255 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
RPAIN-205ENST00000536255 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.83□□□□□ -1
RPAIN-205ENST00000536255 APOMO95445 188 aa8.83□□□□□ -1
RPAIN-205ENST00000536255 UBE2D1P51668 147 aa8.83□□□□□ -1
RPAIN-205ENST00000536255 XGP55808 180 aa8.83□□□□□ -1
RPAIN-205ENST00000536255 SEC11AP67812 179 aa8.83□□□□□ -1
RPAIN-205ENST00000536255 Q8N1X5 172 aa8.83□□□□□ -1
RPAIN-205ENST00000536255 C15orf56Q8N910 161 aa8.83□□□□□ -1
RPAIN-205ENST00000536255 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.82□□□□□ -1
RPAIN-205ENST00000536255 LINC00173Q6ZV60 143 aa8.82□□□□□ -1
RPAIN-205ENST00000536255 GVQW2A0A096LPI5 108 aaPredicted RBP8.81□□□□□ -1
RPAIN-205ENST00000536255 IGHV3OR16-9A0A0B4J2B5 98 aa8.81□□□□□ -1
RPAIN-205ENST00000536255 ZNF561-AS1K7EIQ3 104 aa8.81□□□□□ -1
RPAIN-205ENST00000536255 HSBP1O75506 76 aa8.81□□□□□ -1
RPAIN-205ENST00000536255 ATP5LO75964 103 aa8.81□□□□□ -1
RPAIN-205ENST00000536255 CNBPP62633 177 aaKnown RBP8.81□□□□□ -1
RPAIN-205ENST00000536255 PMCHL1Q16048 86 aa8.81□□□□□ -1
RPAIN-205ENST00000536255 LINC00242Q5T6M2 205 aa8.81□□□□□ -1
RPAIN-205ENST00000536255 C5orf38Q86SI9 138 aa8.81□□□□□ -1
RPAIN-205ENST00000536255 KRTAP4-5Q9BYR2 181 aa8.81□□□□□ -1
RPAIN-205ENST00000536255 A0A096LNJ9 63 aa8.8□□□□□ -1
RPAIN-205ENST00000536255 HERVK_113P63121 156 aa8.8□□□□□ -1
RPAIN-205ENST00000536255 PMVKQ15126 192 aa8.8□□□□□ -1
RPAIN-205ENST00000536255 HIGD2BQ4VC39 106 aa8.8□□□□□ -1
RPAIN-205ENST00000536255 ZC2HC1BQ5TFG8 222 aa8.8□□□□□ -1
RPAIN-205ENST00000536255 FAM19A3Q7Z5A8 133 aa8.8□□□□□ -1
RPAIN-205ENST00000536255 PDZD11Q5EBL8 140 aa8.79□□□□□ -1
RPAIN-205ENST00000536255 GEMIN7Q9H840 131 aaKnown RBP8.79□□□□□ -1
RPAIN-205ENST00000536255 A0A087WZ39 114 aa8.78□□□□□ -1
RPAIN-205ENST00000536255 LINC01620Q4KN68 170 aa8.78□□□□□ -1
RPAIN-205ENST00000536255 C9orf163Q8N9P6 203 aa8.78□□□□□ -1
RPAIN-205ENST00000536255 OR10D4PQ8NGN7 298 aa8.78□□□□□ -1
RPAIN-205ENST00000536255 CST9LQ9H4G1 147 aa8.78□□□□□ -1
RPAIN-205ENST00000536255 FAM30AQ9NZY2 134 aa8.78□□□□□ -1
RPAIN-205ENST00000536255 SERF1AO75920 110 aa8.77□□□□□ -1.01
RPAIN-205ENST00000536255 NDUFA6P56556 154 aa8.77□□□□□ -1.01
RPAIN-205ENST00000536255 HAMPP81172 84 aa8.77□□□□□ -1.01
RPAIN-205ENST00000536255 COX6A2Q02221 97 aa8.77□□□□□ -1.01
RPAIN-205ENST00000536255 Q6ZSA8 131 aa8.77□□□□□ -1.01
RPAIN-205ENST00000536255 LINC01561Q8N1V8 128 aa8.77□□□□□ -1.01
RPAIN-205ENST00000536255 FAT1Q14517 4588 aa8.76□□□□□ -1.01
RPAIN-205ENST00000536255 IGHV3-64A0A075B6Q5 118 aa8.76□□□□□ -1.01
RPAIN-205ENST00000536255 TINCRA0A1B0GVN0 87 aa8.76□□□□□ -1.01
RPAIN-205ENST00000536255 LCE2AQ5TA79 106 aaPredicted RBP8.76□□□□□ -1.01
RPAIN-205ENST00000536255 ORAOV1Q8WV07 137 aa8.76□□□□□ -1.01
RPAIN-205ENST00000536255 PKIGQ9Y2B9 76 aa8.76□□□□□ -1.01
RPAIN-205ENST00000536255 A0A0J9YXV3 536 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 F8WDY8 70 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST1H2BKO60814 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 SLPIP03973 132 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST1H2BJP06899 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST1H2BOP23527 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST1H2BBP33778 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST1H2BDP58876 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST1H2BCP62807 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 SPAG11BQ08648 103 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST2H2BEQ16778 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.75□□□□□ -1.01
RPAIN-205ENST00000536255 FAM19A2Q8N3H0 131 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST1H2BHQ93079 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 C2orf48Q96LS8 159 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 PACRGQ96M98 296 aaPredicted RBP8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST1H2BNQ99877 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 HIST1H2BMQ99879 126 aa8.75□□□□□ -1.01
RPAIN-205ENST00000536255 IGLV4-69A0A075B6H9 119 aa8.74□□□□□ -1.01
RPAIN-205ENST00000536255 EPM2AB3EWF7 344 aa8.74□□□□□ -1.01
RPAIN-205ENST00000536255 SYCNQ0VAF6 134 aa8.74□□□□□ -1.01
RPAIN-205ENST00000536255 LINC00469Q8N7U9 141 aa8.74□□□□□ -1.01
RPAIN-205ENST00000536255 IFI27L1Q96BM0 104 aa8.74□□□□□ -1.01
RPAIN-205ENST00000536255 LINC00526Q96FQ7 95 aa8.74□□□□□ -1.01
RPAIN-205ENST00000536255 CARD19Q96LW7 228 aa8.74□□□□□ -1.01
RPAIN-205ENST00000536255 CAMK2N2Q96S95 79 aa8.74□□□□□ -1.01
RPAIN-205ENST00000536255 LEPROTL1O95214 131 aa8.73□□□□□ -1.01
RPAIN-205ENST00000536255 LINC00310P59036 64 aa8.73□□□□□ -1.01
RPAIN-205ENST00000536255 CDKN2A-AS1Q9UH64 79 aa8.73□□□□□ -1.01
RPAIN-205ENST00000536255 HSPB8Q9UJY1 196 aa8.73□□□□□ -1.01
RPAIN-205ENST00000536255 IGLV5-45A0A087WSX0 123 aa8.72□□□□□ -1.01
RPAIN-205ENST00000536255 H3BRM9 83 aa8.72□□□□□ -1.01
RPAIN-205ENST00000536255 SMR3BP02814 79 aaPredicted RBP8.72□□□□□ -1.01
RPAIN-205ENST00000536255 IGLC3P0DOY3 106 aa8.72□□□□□ -1.01
RPAIN-205ENST00000536255 Q5VSD8 79 aa8.72□□□□□ -1.01
RPAIN-205ENST00000536255 TRAV12-1A0A0B4J245 112 aa8.71□□□□□ -1.02
RPAIN-205ENST00000536255 NDUFA1O15239 70 aa8.71□□□□□ -1.02
RPAIN-205ENST00000536255 PRSS2P07478 247 aa8.71□□□□□ -1.02
RPAIN-205ENST00000536255 SDIM1Q6ZPB5 146 aa8.71□□□□□ -1.02
RPAIN-205ENST00000536255 CHAC1Q9BUX1 264 aa8.71□□□□□ -1.02
RPAIN-205ENST00000536255 NUPR1O60356 82 aa8.7□□□□□ -1.02
RPAIN-205ENST00000536255 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
RPAIN-205ENST00000536255 CHTOPQ9Y3Y2 248 aaKnown RBP8.7□□□□□ -1.02
RPAIN-205ENST00000536255 FAM229AH3BQW9 127 aa8.69□□□□□ -1.02
RPAIN-205ENST00000536255 RNF151Q2KHN1 245 aa8.69□□□□□ -1.02
RPAIN-205ENST00000536255 C6orf226Q5I0X4 101 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms