RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 PSCAO43653 123 aa8.02□□□□□ -1.13
CHD4-203ENST00000535717 SEC11AP67812 179 aa8.02□□□□□ -1.13
CHD4-203ENST00000535717 BVES-AS1Q5T3Y7 98 aa8.02□□□□□ -1.13
CHD4-203ENST00000535717 MAPKAPK5-AS1Q8N8E1 139 aa8.02□□□□□ -1.13
CHD4-203ENST00000535717 OR5A1Q8NGJ0 315 aa8.02□□□□□ -1.13
CHD4-203ENST00000535717 C18orf32Q8TCD1 76 aa8.02□□□□□ -1.13
CHD4-203ENST00000535717 CHCHD1Q96BP2 118 aaKnown RBP8.02□□□□□ -1.13
CHD4-203ENST00000535717 TMEM101Q96IK0 257 aa8.02□□□□□ -1.13
CHD4-203ENST00000535717 NXT2Q9NPJ8 142 aaKnown RBP8.02□□□□□ -1.13
CHD4-203ENST00000535717 UBE2D4Q9Y2X8 147 aa8.02□□□□□ -1.13
CHD4-203ENST00000535717 A0A087WTM6 91 aa8.01□□□□□ -1.13
CHD4-203ENST00000535717 RNF151Q2KHN1 245 aa8.01□□□□□ -1.13
CHD4-203ENST00000535717 TIMM21Q9BVV7 248 aa8.01□□□□□ -1.13
CHD4-203ENST00000535717 C1orf43Q9BWL3 253 aa8.01□□□□□ -1.13
CHD4-203ENST00000535717 CDC42SE2Q9NRR3 84 aa8.01□□□□□ -1.13
CHD4-203ENST00000535717 CSDC2Q9Y534 153 aaKnown RBP8.01□□□□□ -1.13
CHD4-203ENST00000535717 IGLV10-54A0A075B6I4 117 aa8□□□□□ -1.13
CHD4-203ENST00000535717 LRCOL1A6NCL2 159 aa8□□□□□ -1.13
CHD4-203ENST00000535717 K7EMI3 77 aa8□□□□□ -1.13
CHD4-203ENST00000535717 SMAGPQ0VAQ4 97 aa8□□□□□ -1.13
CHD4-203ENST00000535717 DGAT2L7PQ6IED9 249 aa8□□□□□ -1.13
CHD4-203ENST00000535717 KRTAP26-1Q6PEX3 210 aa8□□□□□ -1.13
CHD4-203ENST00000535717 SLC25A34Q6PIV7 304 aa8□□□□□ -1.13
CHD4-203ENST00000535717 GTF2H5Q6ZYL4 71 aa8□□□□□ -1.13
CHD4-203ENST00000535717 PRSS3P2Q8NHM4 247 aa8□□□□□ -1.13
CHD4-203ENST00000535717 TRAV8-4A0A0B4J246 113 aa7.99□□□□□ -1.13
CHD4-203ENST00000535717 IGKV3OR2-268A0A0C4DH90 116 aa7.99□□□□□ -1.13
CHD4-203ENST00000535717 HSBP1O75506 76 aa7.99□□□□□ -1.13
CHD4-203ENST00000535717 ORMDL2Q53FV1 153 aa7.99□□□□□ -1.13
CHD4-203ENST00000535717 FAM104AQ969W3 186 aa7.99□□□□□ -1.13
CHD4-203ENST00000535717 LINC01546A6NGU7 62 aa7.98□□□□□ -1.13
CHD4-203ENST00000535717 WFDC2Q14508 124 aa7.98□□□□□ -1.13
CHD4-203ENST00000535717 RNASE13Q5GAN3 156 aaKnown RBP7.98□□□□□ -1.13
CHD4-203ENST00000535717 Q6ZUT4 128 aa7.98□□□□□ -1.13
CHD4-203ENST00000535717 BAALCQ8WXS3 180 aa7.98□□□□□ -1.13
CHD4-203ENST00000535717 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
CHD4-203ENST00000535717 SPANXA1Q9NS26 97 aa7.98□□□□□ -1.13
CHD4-203ENST00000535717 LECT2O14960 151 aa7.97□□□□□ -1.13
CHD4-203ENST00000535717 KRTAP10-2P60368 255 aa7.97□□□□□ -1.13
CHD4-203ENST00000535717 C2orf66Q6UXQ4 117 aa7.97□□□□□ -1.13
CHD4-203ENST00000535717 CYSLTR1Q9Y271 337 aa7.97□□□□□ -1.13
CHD4-203ENST00000535717 PYGO1Q9Y3Y4 419 aa7.97□□□□□ -1.13
CHD4-203ENST00000535717 LINC00959A0A1B0GUT2 108 aa7.96□□□□□ -1.14
CHD4-203ENST00000535717 H3BRM9 83 aa7.96□□□□□ -1.14
CHD4-203ENST00000535717 K7EP34 96 aa7.96□□□□□ -1.14
CHD4-203ENST00000535717 MRPS36P82909 103 aaKnown RBP7.96□□□□□ -1.14
CHD4-203ENST00000535717 FA2HQ7L5A8 372 aa7.96□□□□□ -1.14
CHD4-203ENST00000535717 SPATA12Q7Z6I5 190 aa7.96□□□□□ -1.14
CHD4-203ENST00000535717 URB1-AS1Q96HZ7 61 aa7.96□□□□□ -1.14
CHD4-203ENST00000535717 GAGE12HA6NDE8 117 aa7.95□□□□□ -1.14
CHD4-203ENST00000535717 SYS1-DBNDD2H3BUS1 97 aa7.95□□□□□ -1.14
CHD4-203ENST00000535717 FUSP35637 526 aaKnown RBP eCLIP7.95□□□□□ -1.14
CHD4-203ENST00000535717 Q8N814 137 aa7.95□□□□□ -1.14
CHD4-203ENST00000535717 CHCHD10Q8WYQ3 142 aaPredicted RBP7.95□□□□□ -1.14
CHD4-203ENST00000535717 DYNC1H1Q14204 4646 aaKnown RBP7.94□□□□□ -1.14
CHD4-203ENST00000535717 IGLV4-3A0A075B6K6 122 aa7.94□□□□□ -1.14
CHD4-203ENST00000535717 IGIPA6NJ69 53 aa7.94□□□□□ -1.14
CHD4-203ENST00000535717 COX8AP10176 69 aa7.94□□□□□ -1.14
CHD4-203ENST00000535717 SS18Q15532 418 aa7.94□□□□□ -1.14
CHD4-203ENST00000535717 TOMM6Q96B49 74 aa7.94□□□□□ -1.14
CHD4-203ENST00000535717 TRAV13-1A0A0B4J241 112 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 A0A1B0GV72 72 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 A6NDN8 102 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 C9orf118A6NHY6 69 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 USP17L23D6RBM5 183 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 XCL1P47992 114 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 FOXI1Q12951 378 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 LINC01545Q5VT33 79 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 AP5S1Q9NUS5 200 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
CHD4-203ENST00000535717 Q6ZVH6 145 aa7.92□□□□□ -1.14
CHD4-203ENST00000535717 TMEM141Q96I45 108 aa7.92□□□□□ -1.14
CHD4-203ENST00000535717 PGPEP1Q9NXJ5 209 aa7.92□□□□□ -1.14
CHD4-203ENST00000535717 HSPB8Q9UJY1 196 aa7.92□□□□□ -1.14
CHD4-203ENST00000535717 A0A096LNJ9 63 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 GAGE10A6NGK3 116 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 HSD52Q0P140 79 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 MAJINQ3KP22 176 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 ZC2HC1BQ5TFG8 222 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 CD164L2Q6UWJ8 174 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 LINC00173Q6ZV60 143 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 C2orf91Q6ZV80 131 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 ERASQ7Z444 233 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 FAM19A2Q8N3H0 131 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 SCGB3A1Q96QR1 104 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 TIMM17AQ99595 171 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 BIRC6Q9NR09 4857 aa7.91□□□□□ -1.14
CHD4-203ENST00000535717 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.9□□□□□ -1.14
CHD4-203ENST00000535717 C16orf90A8MZG2 172 aa7.9□□□□□ -1.14
CHD4-203ENST00000535717 LEPROTL1O95214 131 aa7.9□□□□□ -1.14
CHD4-203ENST00000535717 PRSS1P07477 247 aa7.9□□□□□ -1.14
CHD4-203ENST00000535717 C14orf177Q52M58 125 aa7.9□□□□□ -1.14
CHD4-203ENST00000535717 NTN5Q8WTR8 489 aaPredicted RBP7.9□□□□□ -1.14
CHD4-203ENST00000535717 AMELXQ99217 191 aa7.9□□□□□ -1.14
CHD4-203ENST00000535717 MAP1LC3CQ9BXW4 147 aa7.9□□□□□ -1.14
CHD4-203ENST00000535717 VCX2Q9H322 139 aa7.9□□□□□ -1.14
CHD4-203ENST00000535717 IGLV5-52A0A0A0MRZ9 124 aa7.89□□□□□ -1.15
CHD4-203ENST00000535717 LINC01549A6NIU2 74 aa7.89□□□□□ -1.15
CHD4-203ENST00000535717 ATOH7Q8N100 152 aa7.89□□□□□ -1.15
CHD4-203ENST00000535717 MTURNQ8N3F0 131 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms