RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 GAGE12GP0CL81 117 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 GAGE12IP0CL82 117 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 GAGE2BQ13066 116 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 GAGE2EQ4V326 116 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 EDA2RQ9HAV5 297 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 GAGE2DQ9UEU5 116 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 KIF25-AS1Q9Y6Z4 181 aa8.7□□□□□ -1.02
SCARB1-204ENST00000535005 TRBV27A0A0K0K1C4 114 aa8.69□□□□□ -1.02
SCARB1-204ENST00000535005 TSHBP01222 138 aa8.69□□□□□ -1.02
SCARB1-204ENST00000535005 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
SCARB1-204ENST00000535005 DEFB130BP0DP73 79 aa8.68□□□□□ -1.02
SCARB1-204ENST00000535005 DEFB130AP0DP74 79 aa8.68□□□□□ -1.02
SCARB1-204ENST00000535005 DAD1P61803 113 aa8.68□□□□□ -1.02
SCARB1-204ENST00000535005 C11orf45Q8TAV5 145 aa8.68□□□□□ -1.02
SCARB1-204ENST00000535005 TRGV2A0A075B6R0 118 aa8.68□□□□□ -1.02
SCARB1-204ENST00000535005 TRAV4A0A0B4J268 109 aa8.68□□□□□ -1.02
SCARB1-204ENST00000535005 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
SCARB1-204ENST00000535005 LINC00315P59091 139 aa8.68□□□□□ -1.02
SCARB1-204ENST00000535005 JPT2Q9H910 190 aa8.68□□□□□ -1.02
SCARB1-204ENST00000535005 C9JAW5 83 aa8.67□□□□□ -1.02
SCARB1-204ENST00000535005 NDUFV3P56181 108 aaKnown RBP8.67□□□□□ -1.02
SCARB1-204ENST00000535005 TMEM170BQ5T4T1 132 aa8.67□□□□□ -1.02
SCARB1-204ENST00000535005 TGP01266 2768 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 TRBV10-2A0A0K0K1G8 114 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 FAM240AA0A1B0GVK7 77 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 TMEM223A0PJW6 202 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 GAGE12JA6NER3 117 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 GAGE4Q13068 117 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 LINC01620Q4KN68 170 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 A4D1N5 150 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 H3BT86 120 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 IFITM1P13164 125 aa8.66□□□□□ -1.02
SCARB1-204ENST00000535005 ATP5G1P05496 136 aa8.65□□□□□ -1.02
SCARB1-204ENST00000535005 NANOS2P60321 138 aaKnown RBP8.65□□□□□ -1.02
SCARB1-204ENST00000535005 TTC32Q5I0X7 151 aa8.65□□□□□ -1.02
SCARB1-204ENST00000535005 SUMO4Q6EEV6 95 aa8.65□□□□□ -1.02
SCARB1-204ENST00000535005 A0A087WWL8 130 aa8.64□□□□□ -1.03
SCARB1-204ENST00000535005 TRAV8-4A0A0B4J246 113 aa8.64□□□□□ -1.03
SCARB1-204ENST00000535005 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
SCARB1-204ENST00000535005 ZNRF2Q8NHG8 242 aa8.64□□□□□ -1.03
SCARB1-204ENST00000535005 FHL2Q14192 279 aa8.64□□□□□ -1.03
SCARB1-204ENST00000535005 Q6ZTC4 211 aa8.64□□□□□ -1.03
SCARB1-204ENST00000535005 NACAE9PAV3 2078 aa8.63□□□□□ -1.03
SCARB1-204ENST00000535005 IGHV3-53P01767 116 aa8.63□□□□□ -1.03
SCARB1-204ENST00000535005 UBE2WQ96B02 151 aa8.63□□□□□ -1.03
SCARB1-204ENST00000535005 COX6CP09669 75 aa8.62□□□□□ -1.03
SCARB1-204ENST00000535005 FAM74A4Q5TZK3 123 aa8.62□□□□□ -1.03
SCARB1-204ENST00000535005 NTN5Q8WTR8 489 aaPredicted RBP8.62□□□□□ -1.03
SCARB1-204ENST00000535005 SPANXCQ9NY87 97 aa8.62□□□□□ -1.03
SCARB1-204ENST00000535005 TRAV10A0A0B4J240 114 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 TRGV4A0A0C4DH28 118 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 IGHV3-73A0A0B4J1V6 119 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 TRBV6-4A0A1B0GX49 114 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 ZNF22P17026 224 aaPredicted RBP8.61□□□□□ -1.03
SCARB1-204ENST00000535005 Q1RN00 199 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 Q6ZSN1 163 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 MUSTN1Q8IVN3 82 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 SS18L2Q9UHA2 77 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 PRO0255Q9UI72 69 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
SCARB1-204ENST00000535005 DEFB131BA0A096LNP1 70 aa8.6□□□□□ -1.03
SCARB1-204ENST00000535005 B5MCH6 92 aa8.6□□□□□ -1.03
SCARB1-204ENST00000535005 RPL39P62891 51 aaKnown RBP8.6□□□□□ -1.03
SCARB1-204ENST00000535005 C20orf203Q8NBC4 194 aa8.6□□□□□ -1.03
SCARB1-204ENST00000535005 A0A0J9YXY3 114 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 F5H697 171 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 F5H768 121 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 EIF4EBP3O60516 100 aaPredicted RBP8.59□□□□□ -1.03
SCARB1-204ENST00000535005 TIMM17BO60830 172 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 ZNF56Q15929 161 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 H3BNG1 76 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 M0QY20 66 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 ACYP1P07311 99 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 HTN3P15516 51 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 C15orf53Q8NAA6 179 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 IMUPQ9GZP8 106 aa8.59□□□□□ -1.03
SCARB1-204ENST00000535005 TRBV10-1A0A0K0K1A3 114 aa8.58□□□□□ -1.04
SCARB1-204ENST00000535005 TRBV7-7A0A0K0K1E9 115 aa8.58□□□□□ -1.04
SCARB1-204ENST00000535005 I3L3M4 83 aa8.58□□□□□ -1.04
SCARB1-204ENST00000535005 C2orf82Q6UX34 121 aa8.58□□□□□ -1.04
SCARB1-204ENST00000535005 VSIG2Q96IQ7 327 aa8.58□□□□□ -1.04
SCARB1-204ENST00000535005 ICOSQ9Y6W8 199 aa8.58□□□□□ -1.04
SCARB1-204ENST00000535005 DNAH7Q8WXX0 4024 aa8.58□□□□□ -1.04
SCARB1-204ENST00000535005 K7EQD1 137 aa8.57□□□□□ -1.04
SCARB1-204ENST00000535005 TRIAP1O43715 76 aa8.57□□□□□ -1.04
SCARB1-204ENST00000535005 WWC2-AS2Q96NR7 200 aa8.57□□□□□ -1.04
SCARB1-204ENST00000535005 TMEM126AQ9H061 195 aa8.57□□□□□ -1.04
SCARB1-204ENST00000535005 PAX4O43316 350 aa8.57□□□□□ -1.04
SCARB1-204ENST00000535005 MRPS36P82909 103 aaKnown RBP8.57□□□□□ -1.04
SCARB1-204ENST00000535005 MIAQ16674 131 aa8.57□□□□□ -1.04
SCARB1-204ENST00000535005 TIMM21Q9BVV7 248 aa8.57□□□□□ -1.04
SCARB1-204ENST00000535005 DYNC2H1Q8NCM8 4307 aaKnown RBP8.56□□□□□ -1.04
SCARB1-204ENST00000535005 IGLV4-3A0A075B6K6 122 aa8.56□□□□□ -1.04
SCARB1-204ENST00000535005 DNAJC30Q96LL9 226 aa8.56□□□□□ -1.04
SCARB1-204ENST00000535005 LITAFQ99732 161 aa8.56□□□□□ -1.04
SCARB1-204ENST00000535005 LST1O00453 97 aa8.55□□□□□ -1.04
SCARB1-204ENST00000535005 CEMP1Q6PRD7 247 aaPredicted RBP8.55□□□□□ -1.04
SCARB1-204ENST00000535005 IGHV1-58A0A0C4DH39 117 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 TEX49A0A1B0GTD5 131 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms