RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 HLA-DRB4P13762 266 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 STX12Q86Y82 276 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 CCDC115Q96NT0 180 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 AMELXQ99217 191 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 CALML5Q9NZT1 146 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 V9GYH0 126 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 HLA-DRB4X5D2U9 266 aa-1.62□□□□□ -2.67
COPB1-212ENST00000534771 LINC00959A0A1B0GUT2 108 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 ARPC5O15511 151 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 SMIM24O75264 130 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 CTXN2P0C2S0 81 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 UBE2G1P62253 170 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 DEFB110Q30KQ9 67 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 Q6AWC8 147 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 THEM6Q8WUY1 208 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 BANF2Q9H503 90 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 SHANK2Q9UPX8 1470 aa-1.63□□□□□ -2.67
COPB1-212ENST00000534771 GOLGA4Q13439 2230 aaKnown RBP-1.64□□□□□ -2.67
COPB1-212ENST00000534771 F8VRH5 84 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 DEFB4AO15263 64 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 SSSCA1O60232 199 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 APOC3P02656 99 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 SERPINB1P30740 379 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 REEP5Q00765 189 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 SPTSSBQ8NFR3 76 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 LINC00846Q9NV44 126 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 LSM2Q9Y333 95 aaKnown RBP-1.64□□□□□ -2.67
COPB1-212ENST00000534771 CEP250Q9BV73 2442 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 USP34Q70CQ2 3546 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 ARHGEF5Q12774 1597 aa-1.64□□□□□ -2.67
COPB1-212ENST00000534771 OVOS2A0A0G2JMS6 1433 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 MAP3K1Q13233 1512 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 RAPGEF6Q8TEU7 1601 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 A0A1W2PRE2 83 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 CCL8P80075 99 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 TMEM78Q5T7P6 136 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 SCIMPQ6UWF3 145 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 BAGE2Q86Y30 109 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 Q8N8P6 123 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 CFAP53Q96M91 514 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 NDUFA4L2Q9NRX3 87 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 LENEPQ9Y5L5 61 aa-1.65□□□□□ -2.67
COPB1-212ENST00000534771 MAGI1Q96QZ7 1491 aaPredicted RBP-1.65□□□□□ -2.67
COPB1-212ENST00000534771 RIMS1Q86UR5 1692 aaKnown RBP-1.65□□□□□ -2.67
COPB1-212ENST00000534771 UQCR11O14957 56 aa-1.66□□□□□ -2.68
COPB1-212ENST00000534771 DPM2O94777 84 aa-1.66□□□□□ -2.68
COPB1-212ENST00000534771 PAEPP09466 180 aa-1.66□□□□□ -2.68
COPB1-212ENST00000534771 TPPP2P59282 170 aa-1.66□□□□□ -2.68
COPB1-212ENST00000534771 UBE2D3P61077 147 aa-1.66□□□□□ -2.68
COPB1-212ENST00000534771 UBE2D2P62837 147 aa-1.66□□□□□ -2.68
COPB1-212ENST00000534771 ALX1Q15699 326 aa-1.66□□□□□ -2.68
COPB1-212ENST00000534771 PARVGQ9HBI0 331 aa-1.66□□□□□ -2.68
COPB1-212ENST00000534771 MRPL40Q9NQ50 206 aaKnown RBP-1.66□□□□□ -2.68
COPB1-212ENST00000534771 PATJQ8NI35 1801 aa-1.67□□□□□ -2.68
COPB1-212ENST00000534771 MT-ND4LP03901 98 aa-1.67□□□□□ -2.68
COPB1-212ENST00000534771 CBLN1P23435 193 aa-1.67□□□□□ -2.68
COPB1-212ENST00000534771 PPP1R2P3Q6NXS1 205 aa-1.67□□□□□ -2.68
COPB1-212ENST00000534771 CTAGE3PQ8IX95 158 aa-1.67□□□□□ -2.68
COPB1-212ENST00000534771 WFDC9Q8NEX5 89 aa-1.67□□□□□ -2.68
COPB1-212ENST00000534771 MAGOHBQ96A72 148 aaKnown RBP-1.67□□□□□ -2.68
COPB1-212ENST00000534771 NKTRP30414 1462 aaKnown RBP-1.68□□□□□ -2.68
COPB1-212ENST00000534771 CCDC141Q6ZP82 1450 aa-1.68□□□□□ -2.68
COPB1-212ENST00000534771 CDC42BPAQ5VT25 1732 aa-1.68□□□□□ -2.68
COPB1-212ENST00000534771 ARHGEF10O15013 1369 aa-1.68□□□□□ -2.68
COPB1-212ENST00000534771 EIF3AQ14152 1382 aaKnown RBP-1.68□□□□□ -2.68
COPB1-212ENST00000534771 CICQ96RK0 1608 aaPredicted RBP-1.68□□□□□ -2.68
COPB1-212ENST00000534771 TRBV20-1A0A075B6N2 111 aa-1.68□□□□□ -2.68
COPB1-212ENST00000534771 SPAARA0A1B0GVQ0 90 aa-1.68□□□□□ -2.68
COPB1-212ENST00000534771 S100A5P33763 92 aa-1.68□□□□□ -2.68
COPB1-212ENST00000534771 OR8I2Q8N0Y5 310 aa-1.68□□□□□ -2.68
COPB1-212ENST00000534771 SELENOSQ9BQE4 189 aa-1.68□□□□□ -2.68
COPB1-212ENST00000534771 DISP2A7MBM2 1401 aa-1.68□□□□□ -2.68
COPB1-212ENST00000534771 FYCO1Q9BQS8 1478 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 BCORQ6W2J9 1755 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 A0A087WVE0 104 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 SIX6O95475 246 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 MRPS25P82663 173 aaKnown RBP-1.69□□□□□ -2.68
COPB1-212ENST00000534771 S100A7L2Q5SY68 101 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 MIC13Q5XKP0 118 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 MNS1Q8NEH6 495 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 OR9Q1Q8NGQ5 310 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 AQP10Q96PS8 301 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 DNAH12Q6ZR08 3092 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 A0A0G2JMZ2 1700 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 MARF1Q9Y4F3 1742 aaKnown RBP-1.69□□□□□ -2.68
COPB1-212ENST00000534771 UNC80Q8N2C7 3258 aa-1.69□□□□□ -2.68
COPB1-212ENST00000534771 TMEM2Q9UHN6 1383 aa-1.7□□□□□ -2.68
COPB1-212ENST00000534771 TRBV7-3A0A075B6L6 115 aa-1.7□□□□□ -2.68
COPB1-212ENST00000534771 IL5P05113 134 aa-1.7□□□□□ -2.68
COPB1-212ENST00000534771 C10orf128Q5T292 105 aa-1.7□□□□□ -2.68
COPB1-212ENST00000534771 C10orf113Q5VZT2 155 aa-1.7□□□□□ -2.68
COPB1-212ENST00000534771 CLPSL2Q6UWE3 100 aa-1.7□□□□□ -2.68
COPB1-212ENST00000534771 TMEM263Q8WUH6 116 aaKnown RBP-1.7□□□□□ -2.68
COPB1-212ENST00000534771 SEC11CQ9BY50 192 aa-1.7□□□□□ -2.68
COPB1-212ENST00000534771 SAR1AQ9NR31 198 aa-1.7□□□□□ -2.68
COPB1-212ENST00000534771 IFT140Q96RY7 1462 aa-1.7□□□□□ -2.68
COPB1-212ENST00000534771 B2MP61769 119 aa-1.71□□□□□ -2.68
COPB1-212ENST00000534771 RPS29P62273 56 aaKnown RBP-1.71□□□□□ -2.68
COPB1-212ENST00000534771 TMEM244Q5VVB8 128 aa-1.71□□□□□ -2.68
COPB1-212ENST00000534771 LINC01558Q9Y6Z2 57 aa-1.71□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms